KEGG   Chloracidobacterium validum: J8C06_10480
Entry
J8C06_10480       CDS       T07355                                 
Symbol
cas3u
Name
(GenBank) type I-U CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
cvl  Chloracidobacterium validum
Brite
KEGG Orthology (KO) [BR:cvl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cvl02048]
    J8C06_10480 (cas3u)
Enzymes [BR:cvl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J8C06_10480 (cas3u)
Prokaryotic defense system [BR:cvl02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    J8C06_10480 (cas3u)
SSDB
Motif
Pfam: Helicase_C DEAD ResIII Cas3_HD
Other DBs
NCBI-ProteinID: QUW02749
LinkDB
Position
1:2497153..2501004
AA seq 1283 aa
MTNLTPGISFDCFNELYKELTGHEGACRWQYRLFTYLEAGCFPTDIELATGLGKTSIIAL
WVLALGHALKRNSTAVPRRLAYVVERRVVVDQASEFAEQVGERLEQAATYENHKLHQIAK
VLKEAGCTSSVIEVSTLRGQRTLDKRWRDDPARPAIIVGTVDMIGSRLLFSAYGRVGPWG
RALEAGLLGQDCLIVLDEAHLCSPFAVTLTAIERLVNKSLAPFAVVRMGAMMHPVQDLLR
RTPGLPPEEPNGRRVFRLLDTNTLIDGRNWPDETTDQKVANRLNAVIEIEVKSLDPKKGV
GVQLAEWAIAQLPNASGQSQNPSGAAIGIVVNTVAQARKCAKRLLKENHQVVTLTGSMRG
WDRDQVVKSDDYKRFKSQRNRGAKYDKPIFLVATSCVEVGADIDCDLLGVEACAADSLIQ
RLGRVNRLGLNNNAKVLLVGNRPDPAAKDKTDPAANVFERLNKLLEELKKKVRPGQPVKC
SPATFTALLRGNLNDEEWRKLFDVRVPPPALTCAVLDDLAMTSKHPNTGARPDVGRWLHG
SVEDPSLYVELAWRKELDFVTSPDDAERLLAAFPIGARETARCPLYEAVNLLKAVRDRSL
EDDALGARVLLIKRYGETTPFRLRDLPTDDGKLRAALYDATVVLPTSAGGYDDQFVTPND
KKLVRDIAEKAQPTTRAKRRRLWIDAGTVKATPDSGQQNSEVQKIPSDTDTENLLSEVQK
VVNELLGSNDWQLVEAAGNGACGVVVARKLLREVEDAEDDDGSLGFNTDVLLTQHLHDAR
TKATELCRRLSLPLELSNTVIEAAGQHDLGKDRPWWQRAVGRTEKPAVAKSKHSRFNHHI
NKGYRHELGSVADLSDGKVSLPPGVNRELCLHLIAAHHGHARPGFGTESVGPVVISDSVS
CVLNETPVRFAKLQAQYGWWTLAWLEALVKTADVLASVLPSCGDNGSSVSNILPATSNIQ
LTIDARNPGEYLAVCGLLEVISRYDANATSAWRRETVTLTSEYSAFADVCEIKTNVEEDE
VVKELAKYLSSQADWQEATENDRSPLAQSSGVWCGALEFSLPHKLPILIDHWYEWAYVSK
GRIVQSLGKKNGKSRWKFWAGRQEKTISKAINDNLIKKLNEDLEKKLKLQDIITLTSSGE
SPLKIDAFTTQSSIDRGISANEAKNRTVRPALELLAAIGISAFFPPRRKGDNAPDGVVGV
QNKVFTYHTWSSHLPLALARLAARGVEVAPTRLVQYKATIGTLGRYKHLRLARPAGIAEL
PAGTAKLVDAGNDDESDDEDNDE
NT seq 3852 nt   +upstreamnt  +downstreamnt
atgacaaatcttacgccggggatttccttcgactgcttcaacgaattgtataaagaactt
accggtcacgaaggagcgtgccgctggcagtaccggttattcacatatctcgaggcaggt
tgcttcccaaccgacatcgaattggccaccggcttgggtaaaacatcgatcattgcgctg
tgggtcctggcgctgggccatgctctcaaacgaaactcgactgccgttccccgtcgcctc
gcgtacgttgtcgagcgccgcgtggtcgtcgatcaggcatcggagttcgcggagcaggta
ggcgagcgtcttgaacaagccgccacatacgagaatcacaaactccatcagatagcgaag
gtattgaaggaagcgggctgcacctcttcggtcattgaggtgtccacgctgcgtgggcag
cggacgctcgacaaacgctggcgagatgatccggcgcgccccgcaattattgtcggcacg
gttgacatgatcggctcccgccttctcttcagtgcctacggacgggtaggcccttggggc
cgcgcgctcgaggcggggcttcttgggcaagactgcttgatagtccttgacgaggctcac
ctctgctcgccctttgccgtgacgctcaccgcgattgagcgcctcgtcaacaagtcgctg
gctccgttcgcagtcgtgagaatgggggccatgatgcaccccgttcaagacctgctcagg
cggacgcccggattgccacccgaggagccgaatgggcgacgtgtcttccgactccttgac
accaacactctcatcgacgggcgcaattggccggacgagaccaccgaccagaaggtcgcc
aatcgcctcaatgccgtgatagaaatcgaggtcaagtcgctggatcccaaaaagggcgtc
ggcgttcagctcgccgagtgggccatcgctcagttgccgaacgcttctgggcagtcgcag
aacccttctggagcagctatcggcatcgtggtgaacaccgtcgcccaagctcgcaagtgc
gctaagcgtctgctcaaggaaaaccatcaggtcgtgacgctcacgggcagcatgcgcgga
tgggatcgcgatcaagtcgtgaagtccgatgattacaagcgcttcaagagccagcgtaac
cgcggggctaaatatgacaaaccgatctttctcgtcgcgacctcctgcgtcgaggtcggc
gcggacattgactgcgatctcctcggcgttgaagcatgcgctgccgacagccttattcag
cgacttgggcgcgtgaatagactcggtctaaacaacaacgccaaggtcttgttggtgggc
aacagacccgaccctgctgcgaaggataagaccgaccctgctgcgaacgtcttcgagcgc
ctcaacaaactcctcgaggaactcaagaaaaaggttagaccaggccagccagttaaatgc
tcgccagcaacgttcaccgcactgctgcgaggtaacctcaatgacgaggagtggcgcaag
cttttcgacgtgcgcgttcctcctccggcgttgacctgcgcggtgcttgacgaccttgcg
atgacttcgaagcacccgaacaccggggctcgcccggatgtcggccgttggcttcatggc
agtgttgaagacccatcgctctacgtggagcttgcctggcgcaaggagcttgattttgtg
accagtcccgacgatgccgaacgactccttgcagcgttcccgatcggcgcgcgtgagacg
gcgcggtgtccgctctacgaggccgtcaacttgctcaaggcggttcgtgatcgatccctc
gaagacgacgcattaggggcgcgtgttttgctcatcaagcgctacggtgagaccacgccg
tttcgcctccgcgaccttcccaccgacgacggcaagcttcgcgcggccctttacgacgca
acagtggtgctaccgaccagcgctggtggctacgacgaccagttcgtgacccctaacgac
aagaaactcgtgcgtgacatcgcagaaaaggcacagccaacgacccgcgcgaagcgtcgt
cggctctggatcgacgccgggacagtcaaggcaacgcctgacagtggacagcaaaacagt
gaagtgcaaaaaatcccgtcggacaccgacaccgaaaatctcttgagcgaggtccaaaaa
gttgtgaacgagctgctcggcagcaatgactggcagctcgtcgaggcggcgggcaacggc
gcgtgcggcgtggtcgtggcccgaaaactccttcgtgaggttgaagatgctgaggatgac
gacggctcgctcggcttcaatacagacgttctactgacgcagcatcttcacgacgcgcgc
accaaggctactgagctgtgccggcggctgtcgctgcccctagaactgagtaacaccgtc
attgaggccgccggccagcacgacctcggtaaggaccgcccgtggtggcagcgcgctgtg
ggccgcaccgaaaagcctgcggttgcgaagtcgaagcactcgcgcttcaatcaccacatc
aacaaaggctaccgccacgagctgggttcggttgcagacctcagcgacggcaaggtgagc
ttgccgcccggggtcaaccgtgagctgtgcctgcacctcatagccgcccaccacggtcac
gctcgcccaggatttggcactgagtcagttggcccggttgtcatctctgatagcgtgtcg
tgtgtcctcaacgaaacgccagtgcgctttgcaaagctccaggcccagtacggatggtgg
acgctcgcctggcttgaagcgctggtgaaaactgctgacgtgctcgcctccgtgcttccc
tcgtgcggcgataatggctcatctgtgagtaacatcctgcctgcgaccagcaacatccag
cttacgattgatgctcgcaaccctggcgaataccttgccgtttgcggtctccttgaagtg
atcagccgctatgatgcgaacgcaacatcggcatggcggcgtgagacagtcacgctgacg
tccgagtactctgccttcgctgacgtgtgcgagatcaagacgaacgtcgaggaggacgaa
gtcgtgaaggagttggccaagtatctcagctcgcaggcggactggcaggaggccaccgag
aatgaccgcagtccgcttgctcaatcgagcggtgtctggtgcggtgcccttgagttctcg
ctgccacataagctgccgattctcattgaccactggtacgagtgggcatacgtatcgaaa
ggacgaatcgtgcagagtcttggtaagaagaatggcaagagccgatggaaattctgggca
ggtcgtcaagagaaaacgatctctaaggcgatcaacgacaacctcattaaaaaactcaat
gaagacctcgagaaaaaattgaaactccaagacatcatcacactcacgtcgtcgggcgag
agccccctgaaaattgacgctttcaccacccagtcatcgatcgatcgtggcatcagcgca
aatgaagcaaagaacaggacagttcgccctgccctggaactacttgccgccattgggatc
tcggcattcttccctccgcgccgcaaaggcgacaacgcgcccgacggtgtcgtcggcgtg
caaaataaggttttcacttaccacacttggagctcgcacttgccactggcgcttgcgcgc
ctggccgcgcgaggtgtggaggttgcacccactaggctggtacagtacaaagccaccatt
ggtacgctgggtcgttacaaacacttgaggcttgctcgtccggccggaatagccgagtta
ccggccggaacagccaagttagtcgacgcaggcaacgacgacgaaagcgatgacgaggac
aacgatgagtaa

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