KEGG   Chloracidobacterium validum: J8C06_11975
Entry
J8C06_11975       CDS       T07355                                 
Symbol
cas3u
Name
(GenBank) type I-U CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
cvl  Chloracidobacterium validum
Brite
KEGG Orthology (KO) [BR:cvl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cvl02048]
    J8C06_11975 (cas3u)
Enzymes [BR:cvl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J8C06_11975 (cas3u)
Prokaryotic defense system [BR:cvl02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    J8C06_11975 (cas3u)
SSDB
Motif
Pfam: Cas3-like_C_2 Cas3_HD ResIII Helicase_C DUF6116
Other DBs
NCBI-ProteinID: QUW04500
LinkDB
Position
2:complement(205543..208605)
AA seq 1020 aa
MTRVTIDDFEAFFREVHATAPYPWQRRLAAQVVAGNWPEVIDLPTGSGKTATLDIGVFAL
ACQADCEPNKRTAPRRFFFCVNRRVIVDEAYRRALRLAQSLLAAEQSPQRYPTLARVAAA
LRAISTLRPESAPPLDVLELRGGLYRDNRWARSATQPLIVCTTVDQFGSRLLFRGYGVSA
GAAPIQAGLAAYDSLVLLDEAHISRPFLQTLQAVRDYLDPAQWAERDIGVRPLVVVSMTA
TPVVGAAQSFQLDSEDRATPRLKQILKATKPARLVRVPDIVKAIVTEVQTLADQIRTGAC
PDAQFPLFGEGAPGGCAIGVMVNRVATAKAVHEALHKAFPNASVELVIGAMRPIDRDAQQ
ARLSARIGSDRPDHSAELSIVVSTQCLEVGADYDVDVLITECAALDALRQRMGRLNRRGR
PIQAQAVILMDEKSLEAKQADPIYGEALGQTWAWLQQVAVNNVVDFGIEAFDGLLAAHGA
NGRLPAACLGPSARRDAAALLPAYLDVLVQTSPRPSLDPQVALFLHGSQPGEPDAQVCWR
ADLSAFSPEAWGEVVSLLPPTAAECMTVPMSRLRRWLTGEDRKKDDVSDLLGVGEAADDR
PKSLLPERRGLLWRGLEEHRRLVAVDDIQPGDTVVLPVEVGGWEALGHLPPGALPDVAEE
AARPARDRAVVRLHPALFDGRLETPTLKALFEHMADPEATLNLDDWRAALRELADEVEQH
SEREQFARLIDNLRRLATPELGLLREPYPDRRGYVLVTRKRLGAAVDWATPLIDEGEDER
SYVTCAEPVTLADHSRDVREEIRRTIQALPLTIRQDVLLAAAEGHDWGKADERFQALLRR
ADCTEVWLLDASPQRLLAKSDGFPLTPYERQQARERAGLPSGFRHEMLSVTMLEAAQPAL
PFNAEERDLVLYLVGTHHGRGRPFAPVVVDLEATDIDFTATLLDQTYAVRLTGRQRADRA
PHRLDSGIGARFWRMQRRYGWWGAAYLEAVLRLADQQASADEEAGLTSQPQTFYATGGDT
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgacgcgcgttacgatagatgactttgaagcttttttccgtgaagttcatgcgaccgct
ccctacccttggcagcgtcggctggcagcgcaagtcgtggccgggaactggcctgaggtt
attgatttgccgactggtagcggcaagacggcaacgctcgacatcggggtgtttgccctg
gcctgtcaagcagactgtgaaccgaacaagcgcaccgccccacggcgcttctttttttgc
gtcaaccggcgcgtcatcgtggatgaggcttaccggcgcgcgctgcgcttggcgcaaagc
cttctcgcggccgaacagtccccacagcgttatccaaccctggccagggtggcggctgca
ttgcgcgcgatttcaacgctgcggccggaaagtgcgccaccgctcgacgtgcttgaacta
cgcggcggtctgtaccgtgacaaccggtgggcgcggtcggcgacccaaccgctcatcgtc
tgcacgactgttgaccagtttgggtcacggctgttgtttcgcggctacggtgtctcggcc
ggggcggcgccgattcaagctggactggctgcctatgacagtctcgtactgctcgacgaa
gctcacatcagccgtccgtttctccaaaccttgcaggctgtccgcgattatcttgaccca
gcgcagtgggcggaacgggacatcggcgtgcggccgctggtggtggtttcgatgaccgcc
actccagtggtaggcgctgcccagagctttcaactcgactcggaagaccgcgctacgccg
cggctgaagcagatactcaaggcgaccaagccggcgcgactggtgcgcgtgccggacatc
gtgaaggccatcgtcactgaggttcagacactggccgaccagatcaggaccggcgcttgc
ccggacgcgcagtttccgctctttggcgagggtgctccaggtggatgcgccattggggtc
atggtcaatcgcgtagccacggcgaaggccgttcacgaggcgctgcacaaggcattcccg
aacgccagcgtggaactcgtcattggggcgatgcggccgattgaccgcgacgcccagcag
gcgcgactcagcgcacgcattgggtccgaccgtcccgaccacagcgccgagttgagcatc
gtggtttcaacccagtgccttgaagtcggcgcggactacgacgttgacgtgctcatcacc
gagtgcgcggcgcttgacgcgctccgccagcgcatggggcgtctcaaccggcgcggacgc
ccgattcaggcccaggcggtcatcctcatggatgaaaaatcgctcgaagccaagcaggct
gatccgatttacggcgaggctctcggtcagacgtgggcgtggctgcaacaggttgctgtc
aacaatgttgtggatttcggcattgaggcttttgacggcctcttggcggctcatggagca
aacggccggctgccggcggcttgcctgggcccgtcagcgcgacgtgacgcggccgcgttg
cttccggcatacctcgacgtgctggttcagaccagtccgcggccatcgcttgacccgcag
gttgcgctctttcttcacggctcgcagcccggtgaaccggatgcgcaagtttgctggcgc
gccgatctcagcgccttttcgcccgaagcttggggtgaagtcgtgagcttgcttccgccg
acggccgccgaatgcatgaccgtcccgatgtcgcgcttgcggcggtggctgactggagag
gatcggaagaaggacgatgtcagcgacctgttgggggttggcgaagcggctgacgaccgg
cccaaaagccttctaccggaacggcgtggcttgctctggcgcggactggaggagcatcgc
cggcttgttgccgtagatgacatacagccgggcgacaccgttgttttgcccgttgaagtc
ggtggttgggaagcgctgggccatctgccgccgggcgccttgcccgatgttgccgaggaa
gcggcccgtccggcccgcgaccgggctgttgtgcgactgcatccggcccttttcgacggc
cgccttgagacaccaaccctgaaagcgctgtttgagcacatggccgaccccgaagcaacg
ctcaacctggatgactggcgtgcggccctgcgcgagcttgccgatgaggttgagcaacac
tccgagcgcgagcagtttgcgcggttgatagacaacctgcgccggttggcaactcccgag
cttggactcctgcgcgaaccttatcctgaccggcgcggctacgttttggtgacgcgcaag
cggttgggcgcggctgtggactgggcaaccccgctgatagatgagggtgaggatgaacgg
tcctacgtcacttgtgccgagccggtgacgctggccgaccacagtcgggatgtccgggag
gaaatccggcggacgattcaggcgttgcctctgacgattcggcaagacgttctgttagcg
gcagcggaaggacatgactggggcaaggcggatgaacggtttcaggcgttgctgcgccgg
gccgattgcactgaagtctggcttctggatgcctccccgcagaggttgttggctaaatct
gacgggtttccgctgacaccttatgaacggcagcaagcacgggagcgggctggtctgcct
tcgggctttcggcatgagatgctgtcggtgacgatgctggaagcggcccagccggcgctc
cccttcaacgccgaagaacgtgacctcgtgctgtacttggtcgggacgcaccatggccgc
ggccgtccctttgcgccggtggtcgtggatttggaggcgaccgatattgatttcacggcc
acgctacttgaccagacctatgccgtccggctcacggggcggcagcgggcagaccgggcg
ccgcaccgactggactcaggcatcggtgcgcgcttctggcgcatgcaacgccgctatggc
tggtggggcgcggcctatttggaggcggtgctccgtttggccgaccagcaggccagcgct
gatgaagaggccgggctgacttcccaaccacaaacgttctatgcgaccggaggtgacaca
tga

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