Chloracidobacterium validum: J8C06_13515
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Entry
J8C06_13515 CDS
T07355
Name
(GenBank) DEAD/DEAH box helicase
Organism
cvl
Chloracidobacterium validum
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
SNF2_assoc
Motif
Other DBs
NCBI-ProteinID:
QUW04066
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All DBs
Position
2:complement(578221..581544)
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AA seq
1107 aa
AA seq
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MLPVSQHIAHEFAPSVRERGDALLQAGRVVSFESQGNRLVANVRGSMTYLVEILHDGDAL
VASCTCLHFEEGNFCKHIWATVRVAEQKSVLPPVPSDRPFRLMAEDAWLDKDDSSDGDLF
ASEPATAAKPVADTAASTAISTSYDISTTNWRRWLALVGQQARVASQDLADWEMLYFINA
PKTLTHGVLIVDIFSRKRKLNGEWGRITPSGITLDQVALLPDERDRQVLSLLTGIQEHAE
WEETIDWSPPLPARVRLPPPAFALALPLLCATGRCWLRLGSEPLTSADIAQRPALRWESS
AWQLRLDVTLADNQSHYVLTGELHRGDERCPVTAPRLLVAGGLVFSEDVVAPLDDAGAFY
WIGLLRKSGPIRIPLEDGPDLVGKLLRLPCLPPISLPETLHFKTQTGAPTPVFRLRSHPA
HADDGWLSATLGFEYDGQWVDATDAQPGIFDAGKRLFIHRDLASERAAASLLRELGVRLD
RKPPGIAEYRLSASRLPALIHDLMSQGWRVESEGRLFRPMEGVAMEVRSGVDWFELHGNC
SFGSVTAALPELLRAIKRGESVVTLADGSLGLLSQPWVERYGLLTRLAEADGDHLRFSNA
QVSLLDALLAAQPEVRVDARFQALRDEVRSFDGIEPLLEPPGFVGELRPYQREGLGWLHF
LQRFGFGGCLADAMGLGKTAQTLALLETRRERRQAENLPPSLVVAPRSLIFNWRQEAAKF
TPRMRVLEHIGVARAKSATQFAEYDLILTTYGTLRRDALLLKDVAFDYVILDEAQAIKNA
RTESAKAARLLTCRHRLALSGTPVENHLGELWSLFEFLNPGLLGAASVFQLTAAGGRTVD
PAVQSLLSQALRPFILRRTKEQVARDLPAKTEQTIYCEMEPKQRRAYEELRDHYRRTLLG
LVADKGIQRAKLQILEALLRLRQAACHPALLDPAKAAEPSAKLDTFFMHLSEVLESGSKV
LVFSQFTSLLALIRKQLDADGVTYEYLDGRTRHRQERVERFQTDPDCKLFLISLRAGGQG
LNLTAAEYVFLLDPWWNPAVEAQAIDRAHRIGQTRPVFAYRLIVKDTVEEKVLELQATKR
ELADAIITANNSLIRGLERADLELLLS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctgtttcgcaacatatcgcacacgaatttgctccgtccgttcgtgagcggggg
gatgccctgttgcaggcggggcgggtggtctcgttcgagtcgcagggcaaccggctggtc
gccaatgtgcgcggcagcatgacctacttggttgagatcttgcacgacggcgacgcgctg
gtggcctcgtgtacctgtctgcactttgaggaaggcaacttctgcaagcacatctgggcg
acggtcagggttgccgagcagaaaagtgtgttgcctccggtgccatctgaccgccccttt
cgactgatggccgaagatgcgtggctggacaaagacgactcgtcggacggcgacctcttt
gccagcgagccggcgaccgccgctaaaccggtggcggataccgcagcctcgacggccatt
tcaacttcttatgatatttcgactacgaactggcgacgctggctggcccttgtcggacag
caggcgcgggtggcatcccaggacctagccgattgggaaatgctctactttatcaacgcg
cccaagacgctgacccacggcgtactcatcgtggacatcttttcgcggaagcgcaagctc
aatggcgagtgggggcgcatcactccctccgggataacccttgaccaggtcgcgctgctg
ccggacgaacgcgaccgtcaggttctgtcactgttgaccggtattcaggaacacgccgag
tgggaggaaactatagattggtcgccgccactgccggcccgtgtgcggctccctccaccg
gcctttgcgcttgccctgccgctgctgtgcgccaccggacgctgttggctgcgactaggg
agtgagccgctgacctcagcggatattgcgcagcgtccggcgctccggtgggagtcatcc
gcttggcaactccgcctggatgtcacgctggctgacaaccagtcccactatgtcttgacg
ggcgagctacatcgcggagatgaacgctgcccggtcactgccccccggttgctcgtggcg
ggcggtttggtgttttccgaagatgtggttgcgccgctggatgacgccggagcgttttac
tggattggcttactgcgtaagtctggaccgatccgaattccgttggaagatggaccagac
ttggtcgggaagctcctgcgcctgccgtgcctgccgccgatcagcctgcccgaaaccctg
cacttcaaaacgcagactggtgctccaacgccggtttttcgcttgcggtcgcacccggct
cacgccgatgatggctggctaagtgcgacccttggcttcgagtacgatgggcagtgggtg
gatgccaccgatgcccagcccggtatctttgatgcgggcaagcgcctgttcatccaccgt
gatctggcaagcgagcgagcggcggccagtttgctacgtgaattgggcgtccgcctcgac
cggaagccgccgggtatagccgagtatcggttgagcgcgagccgccttccggcgctgatt
cacgatttgatgtcccaggggtggcgggtggagtctgaggggcgcttgttccgacccatg
gagggcgttgcgatggaagttcggtcgggtgtggactggttcgaacttcatggcaactgt
agctttggaagcgtaaccgctgccctcccggaactcctgcgggcaatcaagcgtggcgag
tcagttgtcacgctggcggatggctcgctcggcttgctgtctcaaccatgggttgagcgt
tacgggctgctgacaagattggctgaggcagatggagaccatctgcgtttttccaatgcg
caggtgagcctcctggacgcgctgctggccgctcaaccagaagttcgcgtggacgctcgt
ttccaagccctgcgtgacgaagtccggtcttttgacggcattgaacctttacttgaacca
ccaggctttgtcggtgagttgcgtccttatcagcgggaggggcttggatggctgcacttc
cttcagcggtttggttttggtggttgcctggccgatgccatggggcttgggaaaaccgcc
cagacactcgcgctgctcgaaacccgccgcgagcggcgacaggctgaaaacctgccgccg
tcgttggtggtggcgccgcggtcgctaatcttcaactggcggcaggaggccgcgaagttc
acgccgcgcatgcgggtgctggagcatatcggcgtcgcccgcgccaaatcggccacccag
ttcgcagagtatgacttgattctcacaacctacggcacactccgccgcgatgcgctcctg
ctcaaggacgttgcctttgattacgtcattctggatgaagcccaggccatcaaaaacgcc
cgcaccgaatcggccaaagccgcgcgtttgctcacctgtcgccaccggctggcgttgagt
gggacgccggttgaaaaccacttgggggagctatggagcctgtttgagtttctcaatccc
ggtctgctgggcgccgcctcggtttttcagttgaccgcggccggtgggcggacggttgat
ccagcggtgcagtcgctgctgtcacaggcgctgcggccattcattttgcgtcgaaccaag
gagcaggtggcgcgcgatttgccggccaagacggagcagacgatttactgtgaaatggaa
ccgaagcagcgccgtgcttatgaagagctccgtgatcattaccggcgaacgctgcttgga
ttggttgccgacaaggggattcaacgcgccaagcttcagattctggaagctttgctgcgg
ttgcggcaggcggcctgccacccggcgctgctcgatccagcaaaggcggctgaaccgagc
gccaaactcgatacttttttcatgcacctgtctgaagtcctggaaagcggctcgaaggtt
ttggtcttttcccagttcaccagtttgctggcgctgattcggaaacagctcgacgcggat
ggcgtgacctatgaatacctggatgggcgcacgcgccatcggcaggaacgggtggagcgc
ttccagactgatccggactgcaaactgtttctcatcagcctgcgggcgggtgggcagggg
ttgaatctcactgccgccgagtatgtgtttctgctcgatccgtggtggaatccggctgtc
gaggcccaggcgattgaccgggcgcatcgcattggccagactcgaccggtgtttgcctat
cggttgatcgtgaaagatacggtggaggaaaaggtgctcgaactccaggccaccaagcgg
gaacttgccgacgcgatcatcacggccaacaatagtctcatccgcggcctcgaacgcgct
gacctcgagttgctgttgtcgtag
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