Crassostrea virginica (eastern oyster): 111099184
Help
Entry
111099184 CDS
T09197
Name
(RefSeq) transcription factor HES-4-like
KO
K06054
hairy and enhancer of split 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03460
Fanconi anemia pathway
cvn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111099184
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111099184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111099184
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111099184
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
111099184
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
111099184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Phage_connector
Motif
Other DBs
NCBI-GeneID:
111099184
NCBI-ProteinID:
XP_022286303
UniProt:
A0A8B8A6L4
LinkDB
All DBs
Position
5:57733749..57735594
Genome browser
AA seq
365 aa
AA seq
DB search
MPGSIKGSCQPQFRYTFKITAQADTPHSKIIDNTNMSVDTLDNVMSKDHKTSLRKSNKPI
MEKRRRARINHCLTQLKSLVLESMRKDSSQYSKLEKADILEMTVKHLRNLQRNQLASAMA
SDPTVVTKFRAGFHECANEVMRYLGTVQNVGPDVKSRLVSHLSTCLQTSNNTPSSDNVHT
PVPSCPPPQQVPVTSPQQVNILQPLSVHIPHNANVPSRPQSSEFVYSRQTSPPSQTQSPQ
LLNIAAPVKSECNNNHITSPIKSTPISGQFQIIPSNLYNGPVAVYVGQFNQRQSATSPDA
MPVFTLQVPANNISPSFHNNSSPQDFSQQQKSKPFAQHHQQQHRSAFVECKQGVPEASDN
LWRPW
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggagtataaaaggctcgtgtcaaccgcaattccgatacacttttaaaatcact
gcgcaagcggacacaccacattcgaaaattatagataacacaaatatgtctgttgatacc
ttggataacgttatgtcgaaggaccacaagacttctttgagaaagagcaataagccaatc
atggagaagagaagacgtgccaggattaaccactgtctaacacaactgaaatctctcgtc
ttggaatcaatgagaaaagacagttcgcaatattcaaaactagagaaagctgacatcctg
gagatgacggtgaaacacttgaggaacctccaaagaaaccagcttgcttctgcaatggct
tccgatccgacagtcgtcactaagttccgtgctgggttccatgagtgtgcaaatgaagtt
atgcgttaccttggaaccgtgcaaaacgttggacctgacgtcaaatctcgcctcgtctct
cacctctcaacgtgccttcaaacatccaacaacacaccgtcatccgacaacgtgcataca
cccgtaccatcttgtcctcctcctcagcaggtgcccgtgacgtcaccccaacaagttaac
attctacaacccctcagtgttcacattccccacaacgccaacgtaccatctcgtccacag
tcttccgagtttgtctacagtcgccaaacgtcccctccgtcgcaaacccagtcgccacag
ttactgaacattgctgctcccgtgaagtcagagtgcaacaacaaccacatcacttctcct
atcaaatccacccctatttctggacaatttcaaatcattcccagcaacctctacaacggc
cccgtcgctgtgtacgtgggtcagttcaatcagcgacagagtgcgaccagtcctgacgcg
atgcccgtgttcacgttacaagttcccgccaataacatctccccgtcttttcacaacaac
tcctccccacaagacttttcccagcaacagaaatccaaaccctttgctcagcaccaccaa
cagcaacacagaagtgcctttgtagaatgcaagcagggcgttcccgaggcttccgacaac
ctctggagaccctggtga
DBGET
integrated database retrieval system