KEGG   Crassostrea virginica (eastern oyster): 111099184
Entry
111099184         CDS       T09197                                 
Name
(RefSeq) transcription factor HES-4-like
  KO
K06054  hairy and enhancer of split 1
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03460  Fanconi anemia pathway
cvn04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    111099184
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    111099184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cvn03000]
    111099184
   03400 DNA repair and recombination proteins [BR:cvn03400]
    111099184
Transcription factors [BR:cvn03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    111099184
DNA repair and recombination proteins [BR:cvn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     111099184
SSDB
Motif
Pfam: Hairy_orange HLH Phage_connector
Other DBs
NCBI-GeneID: 111099184
NCBI-ProteinID: XP_022286303
UniProt: A0A8B8A6L4
LinkDB
Position
5:57733749..57735594
AA seq 365 aa
MPGSIKGSCQPQFRYTFKITAQADTPHSKIIDNTNMSVDTLDNVMSKDHKTSLRKSNKPI
MEKRRRARINHCLTQLKSLVLESMRKDSSQYSKLEKADILEMTVKHLRNLQRNQLASAMA
SDPTVVTKFRAGFHECANEVMRYLGTVQNVGPDVKSRLVSHLSTCLQTSNNTPSSDNVHT
PVPSCPPPQQVPVTSPQQVNILQPLSVHIPHNANVPSRPQSSEFVYSRQTSPPSQTQSPQ
LLNIAAPVKSECNNNHITSPIKSTPISGQFQIIPSNLYNGPVAVYVGQFNQRQSATSPDA
MPVFTLQVPANNISPSFHNNSSPQDFSQQQKSKPFAQHHQQQHRSAFVECKQGVPEASDN
LWRPW
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcccgggagtataaaaggctcgtgtcaaccgcaattccgatacacttttaaaatcact
gcgcaagcggacacaccacattcgaaaattatagataacacaaatatgtctgttgatacc
ttggataacgttatgtcgaaggaccacaagacttctttgagaaagagcaataagccaatc
atggagaagagaagacgtgccaggattaaccactgtctaacacaactgaaatctctcgtc
ttggaatcaatgagaaaagacagttcgcaatattcaaaactagagaaagctgacatcctg
gagatgacggtgaaacacttgaggaacctccaaagaaaccagcttgcttctgcaatggct
tccgatccgacagtcgtcactaagttccgtgctgggttccatgagtgtgcaaatgaagtt
atgcgttaccttggaaccgtgcaaaacgttggacctgacgtcaaatctcgcctcgtctct
cacctctcaacgtgccttcaaacatccaacaacacaccgtcatccgacaacgtgcataca
cccgtaccatcttgtcctcctcctcagcaggtgcccgtgacgtcaccccaacaagttaac
attctacaacccctcagtgttcacattccccacaacgccaacgtaccatctcgtccacag
tcttccgagtttgtctacagtcgccaaacgtcccctccgtcgcaaacccagtcgccacag
ttactgaacattgctgctcccgtgaagtcagagtgcaacaacaaccacatcacttctcct
atcaaatccacccctatttctggacaatttcaaatcattcccagcaacctctacaacggc
cccgtcgctgtgtacgtgggtcagttcaatcagcgacagagtgcgaccagtcctgacgcg
atgcccgtgttcacgttacaagttcccgccaataacatctccccgtcttttcacaacaac
tcctccccacaagacttttcccagcaacagaaatccaaaccctttgctcagcaccaccaa
cagcaacacagaagtgcctttgtagaatgcaagcagggcgttcccgaggcttccgacaac
ctctggagaccctggtga

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