Crassostrea virginica (eastern oyster): 111099211
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Entry
111099211 CDS
T09197
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111099211
Enzymes [BR:
cvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111099211
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
90S particles
Helicases
111099211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ATPase
AAA_19
ResIII
nSTAND3
Flavi_DEAD
AAA_25
AAA_30
ABC_tran
FtsK_SpoIIIE
AAA_29
Motif
Other DBs
NCBI-GeneID:
111099211
NCBI-ProteinID:
XP_022286352
UniProt:
A0A8B8A4F7
LinkDB
All DBs
Position
5:complement(32243090..32257371)
Genome browser
AA seq
1162 aa
AA seq
DB search
MGKRKHGFNWKARQQNETKIDRTTEKKIKLELGDKDVSGYDDSNALVLPSEKRSSKPKQG
PDAAAVKRLSKKERKRLQKIIEQKEKKNARASLLESLSAVQATTDELKQLSSIAEVQTGK
FKRKLLSKTDDGVGPRNAVVGSNRKKHNVDSDLGSGSDSDSSIHTSDMSSDEEEEEEEKT
GEIQQDDIENDTGDMGEGKGVKTGKLEVDSGCDEKMSEDLTTKVKDSSVKQTVKKTIEYK
PVVNIPVNRKADVQEARLKLPILAEEQIIMETINENNVTIICGETGSGKTTQVPQFLYEA
GFAHTGGIIAVTEPRRVAAISMSYRVASEMNLSNQEVSYQIRYEGNVTEKTKIKFMTDGV
LLKEVQKDFLLTKYSVVIIDEAHERSVYTDILIGLLSRIVPLRHKKGTPLKLIIMSATLR
VEDFTENRRLFKAIPPVVKVDSRQFPVTIHFNKRTPLEGYLNEAYKKVCKIHRMLPSGGI
LVFVTGQQEVYTLCKKLKNTFPTYSGQKDQSTEKKDQTKKRRKGDKRKDDVLPTINLDNY
SVDPIDEEEEREAGNDSDLELLDDMDIEDTVHLSSDEEGQSKQVCTDPLYVLPLFSLLST
EKQAKVFSPPPEGCRLCVVATNVAETSLTIPNIKYVVDTGKVKTKFYDKVTGVSTFKIVW
TSKAAANQRAGRAGRVAPGHCYRLYSSAVFNEDFVKFSPAEITRRPVDDLILQMKDMNIE
KVINFPYPTPPEIEQIKAAESLLVSLGALAVENVPRPLSRRGKRKPQDSVSRITPLGRAM
ACFPVSPRYAKMLSLGHQQGLLPYVVAMVAALSVQEVFVEFHKSPTDDKSEFQEKLKYMT
QIKRMWAGSNHSLLLGDLMVLLKAVGACEYQGATPEFCEKHGIRYKAMKEIRKLRAQLTN
AVNTVIVDANLCVDPKLDPPNDLQAKLLRQIVLAGLADHVAKKCPDPAADADEEAKKLKH
AYFCTDLEEPVFIHPLSVLYKQKPEYIVYQYIQETSKVYMKGIIAVEPEWLPIFAPYHCT
FSKPLEDPEPSYSRSKGQVMCHMTCTFSRCSWAVPAVELEYPAGLDRYRWFARFLLEGQV
VPRLKQYAADLLSTPSTMIKSWAKLQPRTEVLLKALVAKGVDNKQTLLKAWKADPTYLLT
EYSQWLPQSKHTDLKDSWPPAT
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagaaagcatggatttaattggaaggcgcgtcaacagaatgaaactaaaatt
gacaggaccacggaaaagaaaatcaaattagaacttggtgacaaagacgtgtcgggatat
gatgacagtaatgctcttgtactgccatcagaaaaaaggtcttctaaaccaaagcaggga
ccagatgcagcagctgtcaaaaggctcagcaagaaggagaggaaaagattacaaaaaatt
attgaacagaaagaaaagaaaaacgctagagcttcactgctggaatccttatcagcagta
caagcaaccacagatgaattgaaacaactttcaagtattgcagaagttcagacagggaag
tttaaaagaaaacttttatccaaaactgatgacggagtaggcccaagaaatgcagttgtg
ggaagtaacagaaagaaacacaatgttgacagtgatttaggcagtggtagtgactcagat
agctccattcatacctctgatatgtcctcggatgaggaagaggaggaggaagagaaaaca
ggagaaatacagcaagatgatattgaaaatgatacaggagacatgggggaaggtaaaggt
gtaaaaacagggaaactagaagtggacagtggctgtgatgaaaaaatgtcagaggattta
acaacaaaagttaaagattcttctgtgaaacagactgtaaagaaaaccattgaatataag
cctgttgtgaatatcccagttaacagaaaagcagatgtacaggaagctagattgaaactt
cccattttggcggaagaacagatcattatggaaactatcaatgagaataatgtgaccatt
atttgtggagaaacaggttctgggaaaactacacaagttccacagttcctatatgaagct
ggatttgctcatactggagggatcattgcggttacagaacccaggagggtagctgccatt
agtatgtcttacagagtggcatccgagatgaacctcagtaaccaggaagtatcttaccag
ataagatatgagggaaatgtgacagagaaaaccaagattaaatttatgacggatggagtc
ttgttaaaggaagttcaaaaggattttcttctgactaaatacagcgttgtgatcattgat
gaggcccatgaaaggagtgtttatacagatatcctgataggtctattatcaaggattgtc
ccccttagacacaagaaaggaacccctttgaagttaatcatcatgtccgccactctgcgg
gtggaagattttacagagaaccgtcgactgtttaaagccatacctcctgtcgtcaaggtg
gactctcggcaattcccagtcaccattcacttcaacaagagaactcctttggaaggttat
ttaaatgaggcctacaaaaaggtttgtaaaattcacagaatgcttcctagtggagggatc
cttgtctttgtcacgggacaacaagaggtgtacacactgtgtaaaaaactcaaaaataca
tttcccacttactccggtcagaaagaccaaagtacagaaaaaaaagaccagactaaaaag
agaagaaagggggacaagaggaaagatgatgtgttaccaacaattaatctagacaattac
tctgtggatccaattgatgaagaagaggagagagaggcaggaaatgactcagatttggaa
ttgttagatgatatggacatagaagacacagtgcacttgagttctgatgaggaaggccag
agcaaacaagtgtgtacagaccccctgtatgttttgcctttattttctctgctatccaca
gaaaaacaggcaaaggttttttcaccacccccagagggctgtcgcctatgtgtggtggct
actaatgtagcagaaacttccctcaccatccctaatatcaaatacgtggttgacacaggc
aaggtgaaaaccaaattctatgataaagtgactggagtgtcaacgtttaagattgtatgg
acatcaaaagctgcagccaatcagagggcaggaagagctgggcgtgttgctccaggccat
tgctacaggttgtatagttcagctgtgttcaatgaggattttgtgaagttttcccctgca
gagatcaccaggcggccagtggatgatttaatactgcaaatgaaggatatgaatatagag
aaagtcattaacttcccatatcccacccctcctgagattgaacagatcaaggctgctgaa
agcttgctagtctcacttggtgctctggctgttgagaatgtaccccggcccttgtctcga
agaggaaagaggaagccccaggactcagtcagccggattacccccctggggcgagcgatg
gcctgttttcctgtttctcctcgctatgccaaaatgctgtccctgggtcaccagcagggt
ctactgccatatgtggttgccatggtggcagctctctctgtgcaggaagtgtttgtagag
ttccataaatcgcccactgatgacaaatccgagtttcaagagaaattaaaatatatgaca
caaataaaaaggatgtgggctggttcaaaccactcgctgctgttgggagacctgatggtc
ctgctgaaggcagttggagcctgtgagtatcaaggagccacacccgagttctgtgaaaaa
catggaataagatacaaagccatgaaggaaatcaggaaattacgagctcaactaactaat
gcagtaaacacagtcattgtggatgccaatctgtgtgtagacccaaaacttgacccacca
aatgatctgcaggccaaacttttacggcagatagtccttgctggattggctgatcatgtc
gcaaaaaaatgtccagaccctgcagctgatgctgatgaggaggctaaaaaactgaaacat
gcctacttttgcacagatctggaggagccagtgtttattcatcccctctcggtcctatac
aagcagaagccagaatacatcgtgtatcagtatatacaggaaacttcaaaagtctacatg
aaagggatcatagctgtggaaccagagtggttgcccatctttgcaccataccactgtaca
ttttccaaacccttagaggacccagaaccttcttatagtaggagtaaaggtcaggtcatg
tgtcacatgacctgtacatttagcaggtgttcctgggcggtgccagcagtggagctggag
tatccggctggattagacagatacaggtggtttgctcgttttctgcttgagggtcaggtg
gtgcccaggttaaagcagtatgcagctgatcttctctcaactccatccacgatgattaag
tcctgggccaaattacagccaaggacagaagtattgttaaaagctttagtggctaaaggt
gtggacaacaaacagactctattgaaagcatggaaggcagacccaacatacctacttact
gaatattcccaatggctgccccagtccaaacatacagaccttaaagactcttggcctcct
gctacatga
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