Crassostrea virginica (eastern oyster): 111099218
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Entry
111099218 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111099218
Cilium and associated proteins [BR:
cvn03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
111099218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
TPR_8
TPR_2
CHAT
TPR_10
TPR_MalT
TPR_16
TPR_17
Rapsyn_N
TPR_NPHP3
RPN7
TPR_9
TPR_11
ANAPC5
Motif
Other DBs
NCBI-GeneID:
111099218
NCBI-ProteinID:
XP_022286358
UniProt:
A0A8B8A6S0
LinkDB
All DBs
Position
5:27673767..27721261
Genome browser
AA seq
2775 aa
AA seq
DB search
MKRADPRPPGQSRPGGGTRQTGDEAPAHSSSAQPFHRSHAIRGPPSPRGKGPPSPREPPS
PITHRTPHHNVDTSQMYTNHVAVTSPRQPASSSSDSQSSSCGPRGTNQTLYLQKIRESSE
AVNGGDFRRAVQLYTEAIQLDPSNHILFTNRSAAYCKLRQFHKSLEDAKRAKQLNSKWAK
AYLREGVALQNLGQHGEALAAFGAGLAQDANNTNLITGLIDAALKSPLKDKLGPTFTQLQ
KLKLNQSAFVIISVIGQELLAAGHYSAAVSMLEAALQIGTCSLKLRGSVFSALSSAYWGL
GSIETAISYMQHDLSVAKSLGDHDGECRAYGNLGSAYFSKGHYKEALSNHRYQLALAMKL
KQRQAAASALGSLGHVYTAIGDYPNALQSHKQCLFLMKQSGDKLHEAREIGNAGAVYLAM
GEFNSAVECHNKHLQIAKNLKNSVEEARAYSNLGSAFHYKRDYQKAISYHRQVLQIAEER
QDKTLEARAYAGLGHASRCMMDYENARKYHEKQLDNALQTKDKVAXGRACSNLGIIFHQL
GEFNSALKLHQVHLRIAKELGDNASQGRAYGNLGNAYCALKNYEQAVKYHKQELQISSQV
NDRHSEGATHGNLAVAYQALGMVDKAQFHYSTHLNISQELKDTPSEARALCNLGNFHSSR
GDYSSAVRFYEQYLMLSQELHDSEGEAKACFNLGYAHFALGNHLEAVRYYEQDMSIAREL
KDQLGMARAYCNLGLAHKALHDYQESLECQRNSLAIMKSIKNTKGIFRALGNIGDVLLKM
GNVSEAIAMYKEQLQMAKKSSSKDLIATAFGALGAAHRNLGQYDKALGYHTQELSIRQDM
DDRRGECRXHGNLGNVHMSLGHYMDALKCYEEQLEKARELQNSSLEAQASGNLAITKMNM
NCFEDAIGLXEQQLAMLEQVSCAASIFDKGRALGNLGDCYEALGDFDESVKCHEQYLAIS
QQANSLSDQDKAYRGLGNAHRNMGNLQQALVCFEKRLVVAHELNSSSAKASAYGELGCLH
SLLGNFEQAISCLQHQLTIAKEMGDRRCEGEAACGLGGVYQNMGDYDKALEYHQMDLQIA
EQTHNSTCQCRAYGNLGLTHESLGNFEDAIQYQEQHLSIAAQLNDRVAKTLAYSSLGRVH
HALNNHSQAVEYLRQGLTIAEQLGRREDEAKIRHRLGLSLWGKGDLDECQQQLYRATDLF
ESIRXDGQLNSEYKMSLFDLQTACYQALQRVLVSLNRHEEALVMAERACTRAFIDYLLER
QAGSEGLFRNDIDPAPITCDQIVHSVSKQKXLVLYFSIAAGYLYSWLLTPDNGIVKFHEX
NMSELETDYGEHSDTLSMRSVNFGSCSLLDQYVGHVRESMGIESHAQKNNSSRESETDSE
SDDVWQQHLEELGDKLNAENDRTGFLRMVNRNHKLNSSNYSLSSMFSLXTSFTTNSFNMH
RKSSLRMKTQASSRAPLSVLYQVLIAPMEEAIATVSSEWGSGPIDLVLVLQGELYLIPFP
VLRKEQNQDTCLXRFNLSIMPSVTALANGQKRDRHGRPVIDSSGAIIVGSPKMPMSVSQG
WCFKDIPGSEYEARIVGELLTSRPLIGAEATKAAVLNQIEQVEVIHFATHLSWKLSXIVL
SPGDNMTTQHSFPTIDSDDSSSDMGGFDGPSLSEYLLTAADIXNLKLHAKLVVLSSGYTD
DRAGRINSDGVVGLTRALLSAGAKCVLYSLWPXPDAAAKLMMRNFYTALQEGRKVTQALS
HGIKSVQSTKQFSHPANWGGWILVGHDIKLSSKIALMGHAICELLQSQDQCREAMRVLLH
LIEKSLQRIHQGIKNSMYTTCQSIENKVGGIPGWKDLLQAVGFRFEXARNGLPPAVFFPQ
TDPGDRLTQASASLQALLGLPPSCLTALSKFLPNYEAGEAYILVVRDILSKMAAKESNID
VQICVKLWRMTGCHEFLASLGLDLVEVGXDEVTLRLGKQXNRRQLQFALQSLVAVFDTQE
APXSLSVDSSSSLESLSSSHSGSTSTSNFSKGSTPPLSPRGSRKKSLFNPAEMEKMRMNK
MQLMYQGGLSGRKXSSRRERTDPSIYLSHQNRIRNMYGPAGTTLSHHSHHTDIHELQEIS
ENSESETDGHTSSGNSWKECRMTVSTNSDSECSTIPNSRTPDQDMLHSSTEHYSLSDGLI
TQSPSSQEYTYSYPGKSSRRVRSSGGSDHSEHEEYKFSRQNSGFSDISVNSADMSHHHPS
NFDRYDVHRSSDVSNISSAFEAEPQNSLSDSGSDMFHRSDTLRQSDMSDTSGISDTNGLP
NELPEAMIMSKNVVDPVPSESGFHSEVTSSNQSDASQQSIDVTKLTHTELALRINADVEN
QRERLEKVQKESLASSRQEAMALRKEFYTSQQSSVNSAAQQTLGHPSDDKSVVAKPFYSE
GKRPPPIPQKPKSFQPFVENPSPNSPQSANVSNTHPLSDQQFNKVNSIVSRINSLAGPQQ
KFQSNTISAFSSSPAKSNISPMRNDQAVEKVALQSLAKGGVTRDVSSFLNSIHSQNQPRP
DSKMSVSSSASSIVTVIHNPNKHVXNSRSNNRLTQSPSLMHNSHTSXPEISESPISEGGN
SHPLHDISFNSSHSSLRGTSPKSILNSSPSCLREKNKKPKKRVSFSDSEPSDLESSSNQN
SNRASPVTPXSFPINPADRYKPNNVIGSKQTIRIAGNHFNNSTNQYPQMKTFGNGSVPTA
MESFYMNGTARGGVVVNGNQKHSAMETKNSAHPTYKPNLVQGAGNPGGPGTRSSDQIRQL
YLGRGRSQVLQSSKC
NT seq
8328 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagcggatccccgacccccgggccagagtcgacccggcggaggcactcgtcag
actggtgatgaggcacctgctcacagttcttcagcccaaccattccatcgctcacacgcc
ataagaggaccgccatcacccagagggaaagggccaccgtccccaagagaaccgccctcg
cccatcacacaccgcacgccgcaccacaatgtcgatacctcccaaatgtacaccaaccat
gtagccgtcacaagtcctaggcagcccgcttcttcttcatcagacagtcagtcatcctct
tgtggaccaagaggcaccaaccagaccttgtacctgcaaaagatccgagagagctctgaa
gccgtaaacggtggggatttccggagagctgtccagttgtacacagaagccatccaactt
gatccttccaaccacattcttttcaccaacagatcagcagcatactgcaaactgaggcag
ttccataagagtttagaggatgccaaaagggccaagcagcttaactccaagtgggcaaag
gcctacctaagggagggggtagccttacagaatctaggacagcatggagaagcactggct
gcgtttggggcggggctcgcccaggacgccaacaacaccaacctcatcaccggccttatt
gatgcagctctcaaatctcctctcaaagacaaacttggaccaacatttacccagttgcag
aagttaaaactgaatcaaagtgcttttgtcatcatctctgtaattggccaagaacttttg
gcagcagggcactacagtgctgcagtgtctatgctagaggctgcactgcagattggaaca
tgcagtctaaagctacgaggttctgtcttctcggcgctcagcagtgcttactggggactg
ggcagcatagaaacggccatctcctacatgcaacatgatttgtctgtagcaaagtcactt
ggtgaccatgatggcgagtgccgtgcctatggtaacctggggtcagcctacttctccaaa
ggtcactacaaggaagccctgtccaatcacagataccagttggccctggccatgaagctc
aagcaacgccaggcggcagcatcggcgcttggtagtctgggacacgtgtacactgccatt
ggagactaccccaacgctctacaaagtcacaagcagtgcctctttctaatgaaacagagt
ggcgacaaactccacgaggcacgggaaattggaaacgctggcgcagtgtaccttgcgatg
ggagaattcaacagcgccgtagaatgtcataataaacatttacaaatcgccaaaaatttg
aaaaacagtgtagaagaagccagagcctatagtaatctaggtagtgcattccattacaaa
agggattatcagaaagcaatatcttatcatagacaggttcttcagatagctgaagaaaga
caggataaaactctggaagccagggcttatgctggcttgggtcatgcatctcgctgcatg
atggactatgaaaacgcaaggaagtaccatgagaaacaactggacaatgctctacagaca
aaggacaaagtagcangaggtcgtgcttgttctaatttgggaattatttttcatcagctt
ggtgaatttaactccgctttaaaacttcatcaggtgcatcttcgcattgcaaaggagctg
ggtgataatgctagtcagggacgtgcttatggaaatctgggaaatgcttactgtgctttg
aaaaattatgaacaagctgtgaaatatcataaacaggaattacaaatttcttcgcaagtg
aacgatcggcattctgaaggagccacacatgggaacctcgcagtggcgtaccaggctcta
ggcatggtcgacaaagctcaattccattactcaactcatctcaacatttcccaggaactt
aaagacacccccagtgaagcccgagctctgtgtaacttgggaaatttccatagttcaagg
ggagattactctagtgctgtgagattctatgagcaatacttaatgttatcgcaggagtta
catgattcagagggtgaagccaaagcttgctttaatctgggatatgctcactttgccttg
ggaaatcatcttgaggctgtgaggtactatgaacaggatatgtctatagctagggaatta
aaagatcaactgggcatggcccgggcttactgtaacttgggccttgcccacaaggctcta
catgactatcaggaatccttagagtgtcagaggaacagtttagctatcatgaaaagtatc
aaaaacaccaaaggaatattcagagctttgggaaatattggtgacgtgttgttaaaaatg
ggtaatgtttcggaagcgatagcaatgtacaaagaacaattacaaatggccaaaaaatcc
agcagtaaagatcttatagccactgcttttggtgcactgggagctgctcataggaatctt
gggcaatatgataaagcccttggttaccacactcaggagctcagcatacgccaagacatg
gatgatcgccgaggtgagtgcaggnngcacggaaacctgggaaatgttcacatgtctctt
ggacattacatggatgctctgaagtgttacgaagaacagttggagaaagctagggaactc
cagaacagttctctagaggcacaggcttcaggaaatcttgcaataactaaaatgaacatg
aactgttttgaggatgcaataggtttgnttgagcagcagttggccatgctggaacaagtg
agttgtgctgcttccatattcgacaaaggacgggctttgggaaatctcggtgactgctat
gaagcattgggagattttgatgagtctgttaagtgtcatgaacagtaccttgccatatct
caacaagccaacagtttgtcagatcaggacaaagcatacaggggccttggtaatgcccac
agaaacatggggaacctgcagcaagccttggtgtgttttgaaaagagactagttgttgct
catgaactcaatagcagctcagcaaaagcatcagcctatggtgaactgggctgtttgcat
agccttctgggtaatttcgagcaggccatttcctgtctgcagcaccagctgaccattgcc
aaggagatgggggacaggaggtgtgagggtgaggcagcatgtggtttgggaggggtgtat
cagaacatgggagattatgacaaggccttagagtaccatcaaatggacctacagatcgcc
gaacagacgcacaattcaacttgtcaatgtcgagcctatggaaatcttggtcttactcat
gaatcactcggaaactttgaggatgcaatacaataccaggagcaacatctgagtattgcc
gctcagctgaatgacagggtggccaaaacactggcttacagcagtctcggtcgtgtgcat
cacgcactcaataaccactcccaggctgtggagtacctgcgtcaaggactcacaatcgca
gaacagctgggtagacgagaggatgaggccaagatccgtcaccgcctgggcctgtccctg
tggggtaagggcgacctggatgagtgtcagcagcagctgtatcgggccacggatctgttt
gagagtattcgcncggacgggcagctcaacagcgagtacaagatgtccctgtttgacctg
cagactgcctgttatcaggcactccagcgcgtgctcgtttcgttgaaccgacatgaggag
gctctggtgatggccgagcgagcttgcacccgagcattcatcgactatctgctggagaga
caggccggaagtgaggggttgtttaggaatgacattgaccctgctccgatcacatgtgac
cagattgtacacagcgtctccaagcagaaantcctggttctctatttctccattgcggca
ggctatctctatagctggctcctgacccctgacaatggcattgtgaagttccatgagnac
aacatgtcagagttggagacagattacggggaacacagcgacactctgagtatgaggagt
gtgaactttggctcgtgttccctactggaccagtatgtaggccatgtcagagaatccatg
ggaatagaaagccatgctcaaaagaacaacagcagtcgtgagagtgaaactgacagtgaa
tcggacgacgtctggcagcaacatctggaagaacttggcgacaaactcaatgcagagaac
gaccggaccggtttcctccggatggtcaaccgtaaccacaagctgaacagcagcaactac
agcctcagtagcatgttcagtctgntcaccagcttcaccaccaacagcttcaacatgcac
aggaagtccagtctacgaatgaagacacaggcctccagtagggcccctctgtccgtgttg
tatcaagtgttgattgcaccgatggaagaagccattgctacagtgtcttcggaatgggga
agcggaccgatagacctagtcctggttttacagggcgagttatatctgattccatttcct
gtgctgagaaaagaacaaaatcaggatacatgtttgnnacgtttcaatttgagtatcatg
ccgtccgtaactgctctggctaatggccaaaaacgtgatcgtcatggtcgaccggtgatt
gactcttctggagccatcattgttggaagtccaaaaatgcccatgtctgttagtcaagga
tggtgtttcaaggatattccaggctcagagtatgaagcgagaatagttggagagctactg
actagccgtccactcattggagcagaggctactaaagctgctgttctgaaccagatcgag
caagtggaagtcatccactttgccactcacttgtcatggaagctttccntcatcgtgtta
tctcctggtgacaatatgaccactcagcactcattccctaccattgattctgatgacagt
tctagtgatatgggaggctttgatggaccttcattatcagagtaccttcttacagctgcc
gatatcnctaacctcaaacttcatgccaaactagttgtgttgagttcgggttacactgat
gatcgtgctggacgtattaattcggatggtgtggtggggctcactcgagccctgttgagt
gctggtgccaagtgtgttctgtactctctctggccangtcctgacgctgcagccaaactt
atgatgaggaacttttatactgcccttcaggagggtaggaaagtaacgcaagctctgtct
catggaattaaatctgtgcagtccaccaaacagttctcacaccctgccaactggggtggc
tggatattggtcggacatgatataaaactcagcagcaagattgcactgatgggacatgcc
atctgtgaactgcttcagtcacaagaccaatgtcgggaggctatgagagtcctactgcat
ttgatcgagaaatctcttcagaggatccatcagggaataaagaattccatgtacactact
tgccagtccatagagaacaaggtggggggaattcctggctggaaggatcttctacaggcg
gtggggttccggtttgagngcgcaaggaatgggctcccaccagccgtgttctttccacag
accgaccccggggatcgcctaactcaagccagtgccagtctgcaggctctgctaggtcta
cctccaagctgtttgactgccttgtccaagttcctgccaaattatgaagctggagaggct
tatattttagtggtcagagatattctgagcaagatggcagctaaggagtccaacattgat
gtgcagatttgtgttaaactgtggcgcatgactggttgtcatgaattcttggcatcttta
ggtttagatttggtagaagttgganaagatgaagtcactctgaggttgggaaaacagncc
aaccgtcgccagcttcagtttgctctgcagtctttggtagctgtgtttgacacacaagag
gcccccnaatctctgtctgtggacagttccagcagcctggagagtctgtcctcgtcccac
agtggctccacctctacctccaacttctccaagggaagcacccctcccctgtcccccagg
ggtagcagaaagaagtccctcttcaaccctgcagaaatggaaaagatgaggatgaacaag
atgcagttgatgtatcagggagggctctctggaagaaaangtagttcaagaagagagaga
accgacccgtccatctacctcagtcaccagaatcgaatccgcaatatgtacggaccagca
ggcaccaccctatcccatcattcccaccacacagatattcacgaactgcaggagatcagt
gaaaatagcgagagcgagactgatggccacactagttctggaaacagctggaaagaatgc
agaatgactgtatctacaaactcagatagtgagtgtagcacaattccaaattcaagaacc
ccagatcaggacatgttacattccagtacggaacattacagtttgtctgacggattaatc
actcagtccccaagcagtcaagagtatacttattcttatccgggaaaatccagtcggagg
gttcggagtagtggtggctctgaccattcagaacatgaggagtataaattcagccgacaa
aatagtggatttagtgatatcagtgttaacagtgcggatatgtctcaccaccatccatcg
aattttgacaggtatgatgttcacagaagctcggatgtgtccaatattagtagtgctttc
gaagctgaacctcagaattccttgtctgacagtggaagtgatatgttccacaggagtgat
actctgagacaatcagacatgtcggataccagtggtataagtgacactaacggattaccc
aatgaactcccagaagccatgatcatgagcaagaatgtggtggatcctgtgccaagtgaa
tctggatttcattcggaggtcacctcttctaatcagagtgatgccagtcagcaaagtatc
gacgtaaccaaactcactcacactgaactagctctgcggataaatgcagatgtggagaat
caaagggaaagattggagaaggtgcagaaagagagccttgcttcatccagacaagaggca
atggctctgcggaaagaattctatacttcacagcaaagcagcgtgaattcagctgctcag
caaaccttgggacatcctagtgatgacaaaagcgttgttgcaaaaccattttattctgaa
ggaaagcgaccacctcctattccccaaaaaccaaaatcattccaacctttcgtggaaaat
ccttcaccaaactcacctcaaagtgccaatgtgagcaatactcatccattatcagaccaa
cagttcaataaagtgaactcaatagtttccaggataaattcattagctggtccacaacag
aagtttcaatccaatactatttctgctttttcaagttctcctgcaaaatcaaacatttct
cccatgagaaatgaccaggctgttgaaaaggtagcattgcaaagtctagccaagggtggt
gtcacaagagatgtgtcttctttcctgaattccatccactcccaaaaccaaccaaggcca
gacagtaaaatgagtgtgagctcctctgcttcatccatagtgacagtgattcacaaccca
aacaaacatgtgnacaactctcggtcaaataacagactaacacagtcaccctcgctcatg
cataatagccatacaagtnaccccgaaatatctgaatctccaattagtgagggaggaaat
agtcaccccttacacgatatcagttttaacagttctcatagttctttaagaggtacaagt
ccaaaatctattctgaactcttcaccaagttgtttgcgagaaaagaataagaaacccaag
aagagagtgagtttttctgactctgagcccagtgatttagaatcttcaagcaaccaaaat
tccaatagggctagtccagtgactccgntgagctttcccataaaccctgcagacagatat
aaacccaataatgtcattggctcaaaacaaaccattcgcattgcaggaaaccatttcaat
aactcaacaaatcaatatcctcagatgaaaacctttggaaatggaagtgtacccactgca
atggaaagtttctacatgaatgggacagcgaggggtggagtggtcgtcaacggaaatcaa
aaacatagtgcaatggagaccaaaaatagtgctcatccaacatacaaacccaatctggtt
caaggtgcgggaaatcctggaggcccgggaaccagatcctcagaccagatccgacagctt
tatttagggcgtggaagatctcaggttctacagtcgtcaaagtgctaa
DBGET
integrated database retrieval system
