Crassostrea virginica (eastern oyster): 111099220
Help
Entry
111099220 CDS
T09197
Name
(RefSeq) syntaxin-18-like isoform X1
KO
K08492
syntaxin 18
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04130
SNARE interactions in vesicular transport
cvn04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111099220
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111099220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111099220
Membrane trafficking [BR:
cvn04131
]
SNARE
Syntaxin (Qa)
Stx-rER
111099220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
Motif
Other DBs
NCBI-GeneID:
111099220
NCBI-ProteinID:
XP_022286360
UniProt:
A0A8B8A5C0
LinkDB
All DBs
Position
5:complement(62998391..63007379)
Genome browser
AA seq
332 aa
AA seq
DB search
MADVTNVFKATVKALRTRKKVPGDVTQKPKAFTNILPSTKNKGDFERKSKEVVQSITKLK
DFLMEHRKAYVSTGSHLSAETSTMSDAERDQIDEEAEKVIHICQESVALIKNLNGREQPQ
VKEHRTAVIRLLEDYLKVVCKLYSEQRAVRVKRVVDRKRLSKLEPDKLVKQRRANKQTTS
PDSTSQPSPQDSPSSGERSQSKSTKRNVEEKKEEEEEISPEEAQMVNDPFQFERENAALF
EEMSSVSQEVGQIEGKVMEIAKLQEIFTEKVLEQDKDIDRIEQVVVGSTENIKEGNEEIR
QAMKNSAGFRVYILFFLLLLTLSLLFLDWYNG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttacaaatgtctttaaagcaactgtcaaagctcttcgaacgagaaagaaa
gttccaggtgatgttacacaaaaacctaaagcattcacaaacattttaccttcaacaaag
aataaaggagactttgaaaggaaaagcaaagaagtggttcagagtattacaaagctaaag
gatttcttgatggagcataggaaagcatacgtaagcacaggcagccatctcagtgctgaa
acgtcaacgatgtctgacgcagagcgtgaccagattgatgaggaagctgagaaagtcatt
catatctgtcaggagtctgtggctcttattaaaaatttgaatggtagggaacaacctcag
gtgaaggaacatcgcacagcagtcatacgtttattggaggactatctcaaagtggtttgt
aaactttacagtgagcagcgagctgtgagagtgaagagagtcgtggaccgaaaaagactg
tcaaagctagagcccgacaaattagtgaaacagagacgagccaataaacagaccacctcc
ccagatagcacaagccagcccagtcctcaggattcccccagctcaggtgaaaggtcacaa
tcaaagtccacaaagaggaatgtggaggagaaaaaggaggaagaggaggagatatctcct
gaggaggcgcagatggtgaatgacccatttcagtttgagagagaaaatgctgcactcttt
gaggagatgagcagtgtttcacaggaagtgggacaaattgaggggaaagtaatggagatt
gccaaacttcaagaaatcttcacagaaaaagttttagaacaggataaagatattgacagg
atagagcaggtggttgtgggctccacagaaaacattaaagagggcaacgaagaaatccgt
caggccatgaagaacagcgccggcttcagggtctacatcttattcttcctgctgcttctg
accctctccttacttttcctggactggtacaatggctaa
DBGET
integrated database retrieval system