Crassostrea virginica (eastern oyster): 111099968
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Entry
111099968 CDS
T09197
Name
(RefSeq) deformed epidermal autoregulatory factor 1 homolog
KO
K23041
deformed epidermal autoregulatory factor 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111099968
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111099968
Transcription factors [BR:
cvn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
111099968
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111099968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAND
DUF5086
Motif
Other DBs
NCBI-GeneID:
111099968
NCBI-ProteinID:
XP_022287214
UniProt:
A0A8B8ABC2
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Position
6:11438778..11443105
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AA seq
490 aa
AA seq
DB search
MSEVDISEELPNGDDSAFTDDHQQPNAGGDGGNTSVNAESPSINHQPIPSQLYVTTTQGL
VPAEQIQEDIKTTHIVIHDQTFDSGLKTPTTPLPPPTPATPLSREKGFKYTWDESVQGNI
LPVRCKNSNGELYKNKFGSGGRGRCIKSDGEWFTPNEFEARSGRASSKDWKRSIRYGGRT
LQCLIEDGVLQPHATSCTCAACCDDETVTGPVRLFVPYKRRKKDSESGPPSPPLSSPLPI
KKQRINSVKSPAPPPSQQIPNATSPVSLATIVPTTNISKDTGTVMVSIGGQTHTAQPIKV
TTSEGESMQMQILTADNLGTFLTTGDAVVMAPITDVKSANGGLTNAAILSVPDMSEQRQW
WQLEELANNMLLQAQQLKAMIEQAKQQTQLFRDAAVQQVKNQMEKEKQEAINALKMEHQV
NLSRTMIAERAQRQIAVQQAVANARSEVKDGLDVSVVSCDSLALESGQSSSNNIVETIMV
TEVDSEKEKE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagtcgacatttccgaagagcttccgaatggagacgactcggcctttacggac
gatcatcaacaacccaacgccggtggagatggtggcaacacctcggtaaatgccgagagt
ccttcgattaaccaccagccaataccgtcacagctttatgttacaacaacacaaggcctt
gtccccgcggaacaaatacaagaggatatcaaaacgacgcatattgtaattcatgatcaa
acttttgactcggggctgaaaacccccaccaccccattacccccgccaaccccagcgacc
ccgctcagcagagagaaagggttcaaatacacgtgggacgaatcagtacagggcaacatt
cttccagtaaggtgcaagaattccaatggagaactctacaaaaataagtttggctcaggc
gggagaggacgttgcatcaagagcgatggggaatggttcacaccgaacgagttcgaggct
cgaagtggaagagctagcagtaaagattggaagagaagcattcgttacggggggcgcaca
ctgcaatgcctgattgaagatggtgtgctgcaaccccacgctacatcctgcacctgtgct
gcttgctgtgatgatgaaacagttacgggtccggtgcgattgttcgtcccctacaaaaga
cgtaaaaaggacagcgagagtggtcccccttcccctccattatcatccccgctacccatc
aaaaaacagagaattaattccgtcaaatctcctgccccacccccctcccagcaaattcct
aatgccacatcacctgtgtctctggcgaccattgtacctaccaccaacataagcaaagat
accggaacggtgatggtttccattggtggacaaactcacacggcccaaccaatcaaagtg
acaacttccgagggagagagcatgcagatgcagatcttaacggccgacaatctcgggact
tttttgacaacaggagatgctgttgtcatggcccctataacagatgttaagagtgctaac
ggcggactgacaaatgccgccatattgtcagtacctgacatgtcggagcagagacagtgg
tggcagctagaagagctggccaacaacatgttgctacaggcccagcagctgaaggccatg
atcgagcaggccaagcaacagacccagctgttcagagacgccgctgtgcaacaggtcaaa
aaccagatggagaaggaaaagcaagaggcaattaatgcactaaagatggagcatcaagtg
aacctgtctcgcaccatgattgctgagcgcgctcagagacagatcgcagttcaacaggct
gtggcaaatgcaaggtcagaggtcaaggacggtttagatgtgagcgtcgtttcctgcgat
tccctggcactggagagcggccaatcctcatcgaacaacatagtggaaacaatcatggtc
acagaagtggactcagaaaaggagaaagaatga
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