Crassostrea virginica (eastern oyster): 111100325
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Entry
111100325 CDS
T09197
Name
(RefSeq) filamin-C-like
KO
K04437
filamin-A
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvn04812
]
111100325
04147 Exosome [BR:
cvn04147
]
111100325
Cytoskeleton proteins [BR:
cvn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111100325
Intermediate filaments
Intermediate filament-binding proteins
111100325
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111100325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
CH
DUF4493
Complex1_49kDa
Motif
Other DBs
NCBI-GeneID:
111100325
NCBI-ProteinID:
XP_022287770
UniProt:
A0A8B8A9E0
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All DBs
Position
6:41523747..41534338
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AA seq
1124 aa
AA seq
DB search
MSKEEQSSTQGKDFSKVSPENRWVEIQRKTFTNWINEQLSVSGRAIQDIEKDFCDGVNLV
ALVESLQFKKIGKVIPNPTGRIQMIQNVALACKAIVEDNIRLVNIGNDDIVNGNGKLILG
LIWHLIVRYQISSRKTKVPPKKLMMNWFQLILPELEISNFTSDWRTGIPLHALIDYLRPG
TSPKWRELHSKDSVENCKSAMLLAKEHLNIPRVISPEDFASEALDELSAMTYLSYFVRSE
SPGYYDTLNWVCKQLRTTQITNLTTDWNDGYNLCSIVTSLGGTIPNWPDLDKDDKKKNLQ
LAIDAGKKMGVDPVLTATEMEDPNIDHLSVMAYLNRFRYAKPVKSDNEKLTIQGDFDNHL
TGVQTHFKLITEDKDVQKELTKVSIKGPKGAVNCSVSWKDRFAECRFTPMDPGSYTLTVS
YNNTPLAVCPINFSVKADLSKVKLKTQSSSCMVGSTNEIEVASEAEVEDVLIECCSPSDE
VRSLTTLYDNGVFSANFRPKSVGLWIVHVFCQGEEVSSSPISFDVYDPQKAWLSGPQKGI
VGEEVVFTVNFSEAGIGEIEAAVRNVGKEIECEVNDTEYSGVKTIEFVPQNSGMYFVYSK
FNNTEITGSPKSIDVLDPGQILVTGEGLTRGLKGKECQFQVNLGDLEGNIHVVVENEGRE
VDTSWREAGSSTYVFTYLPSRAGTFKITVTWDDRAVPGSPFYAKITDRSRVTLITDLTEL
TDENGHLALVCGEETRLLYDISAAGPGRLTAAVLSPKGKLKVDVRKPKKEEVEIAFTAAV
EGDHYIHVYWSDVPLDTSPILAYCPGPILLVDHTKVVIEGKGKEKARALVPAEFIINGKS
AGPGTPRVLLKGVKKDVTVDVWPMKYDRYRCTYSAPNPGAYVLYVYWSEQLVPKCPYKIT
ATSKGASGKVKVTGLGLKGGYVGQELHLDIDTTEAGLGEIKVSCFGELREARCDIFDQHN
GTYKVHFYPKEACRHRLEITYDHEHVPGSPFKVPIGEPPDPRKVRVYGPGIQNGLIQTFE
SKFLVETAGAGAGQLAVRIRGPRGAFKVNIQREEENDRTVLCSYDPEEPGIYVVSVKWSG
RHVRGSPFCVNLFESQAELDNFNGDKKGFFVEKTKANLQWRAEI
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggaagaacaaagttccacccaggggaaagacttcagcaaagtgtcccccgaa
aaccgctgggtggagattcagaggaagactttcacgaactggatcaacgaacaattgagc
gtgagtggtcgagccatccaggacattgagaaggatttttgtgatggcgttaatctggtt
gcattggtggagtcactgcagttcaaaaagatcggaaaagtcatccccaatccaacgggg
cggatccaaatgattcagaatgtggcgctggcctgtaaggccattgtggaggacaacatc
cgactcgtcaatatcgggaacgacgatatagtgaacgggaatggcaaactaattctgggt
ttgatatggcatcttatcgttcgataccaaatttcttcccggaagactaaggttccaccc
aaaaaactgatgatgaactggtttcagcttatacttccggaacttgaaatttcaaacttc
acttctgattggaggacaggaataccgctacatgcactcattgactatcttcgaccagga
acgtcacccaaatggcgggaacttcacagcaaagactcggttgaaaattgcaaatctgca
atgctccttgcaaaggaacacctcaatatccctcgagtcattagtccagaagactttgcg
agcgaggctctggacgagttatctgccatgacctacctctcttattttgtgaggtcagaa
tcgcctgggtactacgacaccttaaactgggtgtgcaaacagttgaggacaactcagatt
acaaatcttacgaccgactggaatgatgggtacaacctttgctctatcgtgacgtcactg
ggagggacaattccaaactggccagacctggacaaagatgataaaaagaaaaatctacaa
ttggcaattgatgctgggaagaaaatgggcgttgatccagttctcactgctactgaaatg
gaggatccaaacattgaccatcttagtgtcatggcttacctgaacaggttccgttatgcc
aaaccagtgaaatctgacaatgaaaagttaaccatccagggagatttcgacaaccatctg
acgggagtgcagactcattttaagcttataacggaagacaaggatgtccagaaagagtta
acaaaggtttcaatcaaaggcccgaaaggcgctgtgaattgtagcgtcagctggaaggac
agattcgccgagtgtcgcttcacccccatggacccagggtcttacacgctgacggtttct
tacaacaacacgcccttggctgtctgtcccattaatttcagtgtcaaggccgatctttcc
aaggtcaaacttaaaacacaatcgtcctcgtgtatggttggatcaacgaacgaaatcgaa
gttgcctcagaagccgaggtggaagacgttctgattgaatgctgctcacccagtgacgag
gtccgatccctgaccacactgtacgataatggagtcttctcagcgaatttcagacccaaa
tcagtcggtctctggattgtgcacgtgttctgtcagggggaggaagtctccagtagcccc
atctccttcgatgtttacgatccccagaaggcatggttatccgggccacagaagggaatt
gtgggagaggaagttgtcttcacagtgaattttagtgaagctgggattggtgaaatcgag
gctgctgtaaggaatgtcgggaaggaaattgagtgcgaggtcaacgatacggaatacagt
ggcgtaaaaacgattgagtttgttcctcaaaactctggaatgtattttgtctacagcaaa
ttcaacaacacggaaattacagggtctcccaaaagtattgatgtattagatcctggacag
attctggtgactggcgaaggcctgacacgtggtttgaaaggaaaagaatgtcaatttcaa
gtcaacctaggggacttggagggaaacatacacgtggttgtagagaatgaaggcagggaa
gttgacacctcgtggcgtgaggcgggctcctcgacgtatgtcttcacgtacctacccagc
agggcgggaaccttcaaaatcacggtcacgtgggatgacagggccgtcccaggcagtcca
ttctacgctaaaatcacggacagatcacgcgtgacattaatcacggatttgacggagttg
acagacgagaatggacatctggcactggtttgtggagaggaaacacgccttctctacgac
atcagcgctgctgggccaggtagattgactgcagccgtactatcacctaaagggaaactg
aaagtagacgtcagaaaaccgaaaaaagaggaagttgaaattgctttcactgcagctgta
gaaggggatcattacatccacgtctattggtcggatgttccactggatacgtcaccaatc
cttgcgtactgcccaggaccaatacttcttgtcgatcacacaaaagttgtcattgaggga
aaaggcaaagagaaagcacgtgctcttgttccagcagaattcatcatcaacggaaaatcc
gcggggccaggaacgcctcgagtgttgttaaaaggcgtgaagaaggatgtgactgttgat
gtttggcctatgaagtatgaccgttacagatgtacatacagtgcaccaaaccctggagcc
tatgttttatatgtttactggtcagaacaacttgttccgaaatgtccatacaagatcacg
gctacgagcaaaggggcgagtggtaaggtcaaggtcacaggtctcggtctcaaagggggt
tatgtgggtcaagaactacatttagatattgacacaacagaagcaggtttgggtgagatc
aaagtaagttgttttggagaattacgagaagcaaggtgcgatatatttgaccaacacaat
ggaacatacaaggtgcatttttatccaaaggaggcgtgtcggcatagactcgaaatcact
tacgatcacgaacatgtaccaggtagtccatttaaggtccccattggggagcctcctgac
cctcgcaaggtccgggtttatggaccagggatccaaaacggcctcatacaaacgtttgag
agtaaatttctggtggaaactgccggagccggcgctggtcagctggccgtccgaatccga
gggccgcgaggtgcatttaaagtaaatattcaaagagaagaagaaaacgacagaaccgtc
ttgtgttcatatgacccagaagaaccaggaatttacgtcgtgtccgtgaaatggtcagga
cgtcacgtgagaggaagccctttttgtgtaaacctgttcgagtctcaagcggaactggac
aatttcaatggcgacaaaaagggatttttcgtagaaaaaacaaaggctaacttacaatgg
cgggctgagatttaa
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