Crassostrea virginica (eastern oyster): 111100355
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Entry
111100355 CDS
T09197
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111100355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111100355
03012 Translation factors [BR:
cvn03012
]
111100355
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111100355
Translation factors [BR:
cvn03012
]
Eukaryotic type
Release factors
111100355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
111100355
NCBI-ProteinID:
XP_022287830
UniProt:
A0A8B8A9J7
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All DBs
Position
6:36800467..36810453
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AA seq
443 aa
AA seq
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MASNGVDGESSADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRIAKMLADEF
GTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVIYCGTIVTDEGKEKKVNIDFEP
FRPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLSGNTREVLHKFTVDL
PKKHGRGGQSALRFARLRMEKRHNYVRKVAEVAVQLFITNDKPNIAGLVLAGSADFKTEL
SQSDMFDPRLQAKIIKIVDVSYGGENGFNQAIELSSDSLANVKFIQEKKLIGRYFDEISQ
DTGKYCFGVDDTLKALEMGAVDILIVWENLDVTRYVLKNHATDVENILYLRPEQEKDKTH
FIDKDTGVELELSEQMPLLEWFANNYKNFGATLEIITDKSQEGAQFVRGFGGIGGILRYQ
IDFQVLSGQVFDELEDDFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaacggtgtagacggtgaaagcagcgctgaccgaaacgtggaaatatggaaa
ataaagaaacttataaaaagtttggaagccgctagaggaaatggcacgagtatgatatca
ttaatcattccacctaaagatcaaatctcaagaatagcaaagatgttagcagatgaattc
ggaacagcgtcaaatattaagagtcgtgttaaccgactgtctgttttgggagcaattaca
tcagtacaacagaggttaaaactttacaacaaagttccaccaaatgggcttgtgatatat
tgtggtaccattgtaacagatgaaggaaaggaaaagaaagttaacattgactttgaacct
ttcagacccatcaatacatctctgtatttatgtgataataaattccacacggaggcatta
acagctttgttagcagatgacaacaagtttggcttcattgtgatggatggtaatggggca
ctatttggaactctgtccggaaacacgagagaagtcctacacaaattcacagttgattta
cccaagaaacacggaagaggaggtcagtccgctctccgttttgcccgtctacgtatggag
aagcgtcacaattatgtcaggaaggttgcagaggtcgcagtgcagctgttcatcaccaac
gacaaacccaacattgctggactcgtcttagcaggttcagccgacttcaaaacggaactc
agtcagtcagatatgtttgatccaagattgcaagccaagatcattaagattgttgatgta
tcttatggaggagaaaatggtttcaatcaggcaattgaactttcttcagattccttagca
aatgtgaaattcatccaagaaaagaagctcataggtcgatattttgatgaaatttcacaa
gacactgggaaatactgttttggtgtggacgacactctgaaggcattagaaatgggagca
gttgacatccttattgtgtgggaaaatctggatgtcacacgatacgttctgaagaaccat
gcaacagatgttgaaaatatcttataccttcgacctgagcaggaaaaagacaaaacccat
ttcattgataaagatactggagtagagttggaattatcagaacagatgcctttactagaa
tggtttgcaaataactacaaaaactttggtgccacccttgaaatcatcactgataagtca
caggaaggggcccaatttgttcgaggatttggaggaattggaggaattctgcgatatcag
atagactttcaagtgttatcaggacaggtgttcgatgaactggaggatgattttgatcta
gatgactattga
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