Crassostrea virginica (eastern oyster): 111100453
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Entry
111100453 CDS
T09197
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111100453
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Gene silencing
Transposable elements
111100453
BRITE hierarchy
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GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
HTH_Tnp_4
Sigma70_r4
DUF6840
UPF0122
Motif
Other DBs
NCBI-GeneID:
111100453
NCBI-ProteinID:
XP_022288067
UniProt:
A0A8B8A9D2
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Position
6:complement(15849090..15851597)
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AA seq
229 aa
AA seq
DB search
MATVLVLRRRKRRILRKERVYRDRSNYLFTLDDKDLIERYRFPRHVIERLINDVQPLIMR
PTYRAHAVPVHTQVLVTLRYLAKADFFSEVGDLHGISRSSVSSIIHNVCLAINHTQKNIA
FPDNASDLREIKSKFHDIGKIPNCVGAVDGTLIPIKGMSGTDEPAYVCRKNFHALNIQAV
ADVRMRFLHLNACFPGSSHDSFVLANSGLPAKCSHCLKEVGYLGTQDTH
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgttttggttttgaggcgacgaaagcggaggatattaaggaaagagagagta
tacagagacagatcaaactatttatttacattggacgataaggatctcatcgaacgctat
cgttttcctcgacatgttattgaaaggttaataaatgatgtccaacctctcataatgcga
cctacttacagagcccatgctgtccctgttcacacacaggttctcgttaccctgagatac
cttgccaaggctgattttttttcggaagttggcgacctacacggaatctcaagatcttct
gtttcgagtatcattcacaatgtttgcctggcaataaaccacacacagaagaatattgca
tttcctgacaatgcatcggacttgcgagaaatcaaaagcaagttccatgatatcgggaaa
atacccaactgtgtgggtgcagtggatggaacacttattcccattaagggaatgagtggc
acagacgaaccagcatatgtctgcaggaaaaattttcacgcactcaatatacaggcggtt
gctgatgtaagaatgcgattcctccacctgaatgcgtgtttcccgggttcgtcacacgat
tcgttcgttttggcgaattccggactaccagcaaagtgcagtcactgcctgaaggaggtt
ggttacttggggactcaggatacccactga
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