Crassostrea virginica (eastern oyster): 111100540
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Entry
111100540 CDS
T09197
Name
(RefSeq) dynein assembly factor with WDR repeat domains 1-like isoform X1
KO
K19760
dynein assembly factor with WDR repeat domains 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111100540
04812 Cytoskeleton proteins [BR:
cvn04812
]
111100540
Cilium and associated proteins [BR:
cvn03037
]
Motile cilia and associated proteins
Dynein assembly factors
111100540
Cytoskeleton proteins [BR:
cvn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
111100540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_RIG_2nd
WD40_like
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_HPS5
eIF2A
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
CEP19
Beta-prop_VPS8
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
111100540
NCBI-ProteinID:
XP_022288221
UniProt:
A0A8B8A9T3
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All DBs
Position
6:35309621..35319900
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AA seq
417 aa
AA seq
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MKLKRFLLRYYPPGIILEYEQGGNLKTKSIDLLDLKVETDVDAVVDEIARKEPLITASKT
EQVRKLVQRLQEKLAQKDDHHFYLFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKVWD
TASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSSETGKCYHTFRGHSAEI
VCLSFNPQSSVVATGSMDTTAKLWDVQTGQELVSLAPQGHSAEIISLSFNSTGTQLITGS
FDHTVSVWDINSGKRIHSLIGHKAEISSAQFNWDCSLIATGSMDKTCKIWDPPSGRCIGT
LRGHDDEVLDVAFDFTGQMLLTASADGTARCYNAVSHNLISKFEGHEGEISKITFNPQGT
SVLTASSDKTARLWDPETGRCKQILEGHTDEIFSCAFNYEGNTIITGSKDNTCRIWR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaagcgatttcttcttcgatattaccctcctgggatcatattagaatatgag
cagggaggaaaccttaagactaaatccattgaccttttggatctgaaagtagagaccgat
gttgatgctgtggtggatgagattgccagaaaggagccacttattacagcatccaaaaca
gaacaagtcaggaaacttgttcaaagactgcaagaaaagttagcccaaaaagatgatcat
cacttctacttattcaaggttctaagagcccacattctgccccttaccaatgttgcattt
aacaaatcaggatcaagcttcattactgggagctatgacaggacgtgtaaagtgtgggac
acggcctcgggggaggagttacacaccctggaggggcaccgcaatgtggtgtatgccatt
gcattcaacaatccatatggtgataaaattgccactggttcctttgacaaaacctgcaaa
ctatggagctctgaaacggggaagtgttaccacactttcaggggacattctgccgaaatt
gtttgcctgagttttaacccacagagttcagtggtggccactggaagtatggacaccacc
gccaaattgtgggatgtccagacaggacaggaacttgtctctctcgctccacagggccat
tcagctgagattatctccctttcctttaactccacgggaacccagctgatcactggttct
tttgatcacacagtgtcggtgtgggacatcaactcgggcaagcgaatccattcccttatt
ggacacaaagcagagatcagcagtgcacagtttaattgggactgttctctgatagccacg
ggttctatggataagacctgcaaaatctgggatcccccttccggtcgctgtattggtact
ttgagaggacatgatgacgaggttctagacgttgcatttgacttcacgggacaaatgctg
ctcactgcttcggcagatggaacggcccggtgctataacgccgtctcacacaatctcatc
tccaagtttgagggacacgaaggggaaatttcaaagataacatttaaccctcaaggaacc
tcggtgctgactgctagctcagacaagacagctcgtctgtgggacccggagactggtcgt
tgtaagcagattctggagggacacacagatgaaattttcagttgtgcattcaactatgaa
ggcaacaccattatcactggtagtaaagataacacgtgcaggatatggagatga
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