KEGG T09197: 111100612

Crassostrea virginica (eastern oyster): 111100612

Entry

111100612         CDS       T09197

Name

(RefSeq) eukaryotic translation initiation factor 4E type 2-like isoform X1

K03259

translation initiation factor 4E

Organism

cvn Crassostrea virginica (eastern oyster)

Pathway

cvn04150

mTOR signaling pathway

Brite

KEGG Orthology (KO) [BR:cvn00001]
09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    111100612
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvn03019]
    111100612
   03012 Translation factors [BR:cvn03012]
    111100612
Messenger RNA biogenesis [BR:cvn03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     111100612
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111100612
Translation factors [BR:cvn03012]
Eukaryotic type
  Initiation factors
   eIF-4
    111100612

SSDB

Motif

Pfam:

IF4E

Other DBs

NCBI-GeneID:

111100612

NCBI-ProteinID:

XP_022288377

UniProt:

A0A8B8AA89

LinkDB

Position

6:complement(31568863..31572333)

AA seq 234 aa
MPQKIKSYDVLRSTIEENENGLKTEDSGEEDNEQRQDADEPPRPSPKPGPGEHPLQFNYS
LWFSRKAPGKHSTATSYDQNLKLVGTFASVEQFWKYYAHIVRPSDLSGHSDYHLFKEGIR
PMWEDNANNKGGKWIVRLKKGLASRCWENLILAMLGEQFMVGEEICGAVISIRYQEDILS
LWNRTASDQQTTSRIRDTLKRVLNLPPNTIMEYKTHNDSIKDNSSFRNTDIFMR

NT seq 705 nt +upstreamnt +downstreamnt
atgccacaaaagataaaatcttacgatgttttgcgttcaacaattgaagaaaatgaaaac
gggttaaaaacagaagatagcggtgaggaagacaatgagcaaagacaggatgcagatgaa
cctcccagaccctcaccgaaacctggtccaggagaacatcctcttcagtttaattattct
ctgtggttctcaaggaaggccccaggaaaacactcaacagccacaagctatgatcaaaat
ctaaaattggtgggaacatttgcatcggtagaacagttttggaagtactatgcacacatt
gtgcgcccaagtgatttatctggacacagtgattatcatttgttcaaggagggaattcgt
ccgatgtgggaggacaatgcaaataataaagggggtaaatggatcgtcaggctaaagaaa
gggctggcctcgcggtgctgggagaacttaatactggccatgctgggggagcagtttatg
gtcggggaagaaatctgtggggcggtcatatccatccgctaccaggaggatattttgtct
ttgtggaatcgtacagctagcgatcagcagactacctccagaatccgagacacgctaaag
cgagtgttgaacctcccccccaacaccatcatggagtacaagacacataatgacagcatc
aaggataattcaagcttcaggaacacagatatatttatgaggtga

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