Crassostrea virginica (eastern oyster): 111100641
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Entry
111100641 CDS
T09197
Name
(RefSeq) peroxisome biogenesis factor 1-like isoform X1
KO
K13338
peroxin-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111100641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111100641
Membrane trafficking [BR:
cvn04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
111100641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
nSTAND3
AAA_22
NACHT
AAA_14
RNA_helicase
AAA_18
TIP49
Zeta_toxin
AAA_25
NPHP3_N
RuvB_N
AAA_lid_PRS2_C
AAA_5
DUF815
AAA_28
AAA_33
PEX-2N
AAA_29
Sigma54_activat
AAA_7
KAP_NTPase
ABC_tran
Vps4_C
AAA_23
APS_kinase
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
111100641
NCBI-ProteinID:
XP_022288432
UniProt:
A0A8B8AAE5
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Position
6:41729784..41773189
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AA seq
1257 aa
AA seq
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MNFDVVPVHFTNDRTCFISLPSSIIKKIANKSELLVFEVQTEDGHVVHVSLKDSTANNHL
GINGLFAEKLKLKDKQQVIVRVKRNVPACSQVSIEPQSCDDWEILEKHASYVEIHLLDQV
RVVWQGLVLPVWVERNVCVYLKITTTTPSEDCVLLVPDTEVVVSPKVRGGTAVSKEKKVR
KPDYLPTREQEEDNRETSMNSPMRSSSRSVSPSKWRWKEWVPWLLGVQHTSNRIQDPYSR
EHLRKKSIDYKRTDSIPEGLNFTFRVQPRSVRGTSTEQKTEEDFYECHFLQQPAVVFVNA
EDIIEQTGNMNLHIPGTFLARLSKLLSPKVQMTEIEKELNEEKNKGKSKAVQSPKLEPSG
VSRKEKDHLTQCVVRVVVLDRKKANSNEDCEDMLQAVTEEQPLVCHHVVVSDLLRRLMKL
DATSCVWLHTIGTSPVTPTTYHVHPVGSLPHGFSSQMVEMAFRRWIATVTTAKLPLIIFN
GILIQFPLFKDKNMEFQLVFPEGTGNESSDIPPYSLIYQGNMNEVPLTLNQSNQDPTKNP
PKWPVFPMLQYTNLETVDSMLPKIQLSDLGGVEEYIPKALSHLEMCLGTKPLADSMFRVT
TPGLSNGMILITGSKGSGKSSLAKALCRKMAEKENLARIFHVDCKPLRGKRPDSILKYLE
EVFDEAIWRQPSIILLDDLDHVVPAPSGPEAELSGEAIYGARIGEVVRDILRKEVSNQGC
VAVIATSQSRSSIHPLLVTSRGTHFLQELIRIDPPDKNKRQKILTAIIKNRHMVSVETLE
QLDLNVILGKTEGYVAQDLENLISRAIHSHTLKQVANCCSERKPEQSADRPQPEMILTQE
DFREAMEGFTPASIRNVPLHQAGELGWKDVGGLTDVKNTLIETLMWPSKYPLLFSSCPLR
LRSGILLYGAPGTGKTLLAGVVAKECGLNFISIKGPELLSKYIGASEQAVRDNFVRAQSA
KPCVLFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLEGVYVLAATSRPDLIDPA
LLRPGRLDKCLQCQLPNEEERLKIFEALTRKMSIGKSIDFKYFAEECEHFSGADIKALLY
NAQLEAIHEYTGKVLKGENPELLEPPIDKNRQQRSRSPRKSKSQKLLKVETLPPKVSTNK
TIAHIPKLQDGPSPVMEEMEEKLSSQVDQIRARLMVNKATEHVSTVDSMFSPVTTCKGQL
IQINQSHLLAALQKTHPSVNEKERRKFQKIYENFTSTRGGDFGASVEQTIGSRQTLA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgacgtagtcccagtacatttcactaatgacaggacttgttttatatcccta
ccatcctcaattatcaagaaaattgcaaataaatcggagttgctggtgtttgaagtgcag
acagaggatgggcacgttgtgcatgtgtccctgaaagattccacagctaacaaccatcta
ggaatcaatggcttgtttgctgagaaattgaaattaaaagacaagcagcaggtgattgtt
agagtgaaaagaaatgtgccagcatgcagccaagtgtctattgaaccacagtcatgtgac
gactgggaaatacttgagaaacatgcaagttacgtggaaatacacctgttggaccaggtg
agggtcgtttggcagggtcttgtcttacctgtgtgggtggagagaaatgtctgtgtctac
ctgaaaatcacaacaacaactccatcagaggattgtgttttgttagtccctgacactgaa
gttgtcgtgtcccccaaagtcagagggggaacagcggtttccaaggaaaaaaaagtcagg
aaaccagactaccttccaacaagggaacaagaggaagacaacagagaaacatcaatgaac
agtcccatgcgctcttccagtcgaagtgtttctccatcaaaatggaggtggaaagaatgg
gtaccatggttacttggggtgcagcatacgtccaataggattcaggatccttatagtcga
gaacatctgcgcaagaagtctattgactacaaaaggactgattcaattccagaagggctg
aatttcactttcagagttcaaccgcgttcagtgagaggaacttctacagaacagaaaaca
gaggaggatttttacgagtgccatttcttacaacaaccagccgtagtttttgtaaatgca
gaggacatcattgagcaaactggaaatatgaatttacatattcctggaacattccttgct
agactttctaaactactttcacccaaagtacaaatgacagaaattgaaaaagaactgaat
gaagagaaaaacaaggggaagtcaaaagctgttcagtctccgaaattggagccatctggt
gtgagtcgtaaagagaaagatcacctgacgcagtgtgttgtccgagttgtggtgttagat
aggaagaaagcaaactccaatgaagactgtgaagacatgttacaagctgtgaccgaggag
caaccattggtgtgccatcatgtggttgtgtcagacttgttgagaagactgatgaagctg
gatgctacaagttgcgtttggttgcacacaatagggacatctcccgtcacacccaccacc
taccatgtgcatcctgtggggagtttaccacatggatttagtagtcagatggtggagatg
gcatttaggaggtggatagcaactgttaccacagctaaacttcctctgattatttttaat
ggaattctcattcagttcccactctttaaagacaaaaacatggagtttcagttagtgttc
ccagaaggaacaggcaatgagagttctgatattccaccttacagcctcatttaccagggg
aatatgaatgaagttcctctcaccttaaatcagtcaaaccaagaccccaccaaaaaccct
cccaaatggccagtgtttcctatgctacagtataccaaccttgagactgtcgattccatg
cttcctaagattcaactgtctgatttagggggggtggaggagtatattccaaaagctttg
tctcacttggagatgtgtttgggcactaagcccctggcagacagcatgttcagggtcacg
accccaggtctctccaatggcatgatcctcatcactggcagtaaggggagcggcaaaagc
tctctggccaaagcactctgtaggaaaatggcagagaaagaaaacttggctcgaattttt
catgtggactgtaagcctctgagaggaaaacgtcctgatagtattttgaagtatttggag
gaagtttttgatgaggccatttggagacagccatccataattctactggatgatttagat
catgtggtacccgctccgagtggtcccgaggcagaactcagtggagaagccatctatgga
gcaaggattggtgaagtggtgagggacatcctgagaaaggaagtttccaaccagggctgt
gtagctgtcatagcaaccagtcagtcccgaagctccatccaccccctgctggtcacctcc
agagggacacacttcctccaggagctcatccgaatcgaccccccggacaagaataagaga
cagaagattctaacagccataataaagaacagacacatggtgtcagtagaaaccttggag
cagttagatttgaatgtgattctggggaaaacggaaggctacgttgcacaggacttggaa
aacctcatcagccgtgccatccattcacacactcttaaacaagtggcaaactgctgttca
gagaggaaacctgagcagtcagcagacaggccccagccagagatgatcctgacccaggaa
gactttagagaggccatggaggggttcacgccagcatccattagaaacgtaccactgcac
caggcaggagaactgggctggaaggatgtgggaggactcaccgatgtcaagaatactttg
atagaaactctcatgtggccttcaaagtaccccctcttattttcctcctgccccctaagg
ctgaggtcaggaatattgttgtatggtgccccggggacagggaagacactgttagcgggg
gtagtggccaaggaatgtgggctcaacttcatcagcatcaagggtccagaacttctcagc
aagtacattggtgctagtgaacaagcagttcgggacaactttgtgagagctcagagtgcc
aagccctgtgtcctgttctttgatgagtttgattctctcgctcccaggcgtggccatgac
aacacgggggtgacagaccgggtcgtgaatcagctgctgacacagctggatggggtggag
ggtctggaaggtgtttatgtactagcagccaccagcaggcctgatttgatcgacccagct
cttctgcgtccgggcagattagacaaatgtctacaatgtcaacttccaaatgaggaagag
agactgaaaatatttgaagctctcacaaggaaaatgtcaataggaaagtctatagatttc
aagtactttgctgaagaatgtgaacatttctcaggagctgacataaaagcgttattgtac
aatgctcaactagaagccatccatgaatatacgggaaaggtcctcaagggagagaaccct
gaattgttagagcccccaatagataaaaacaggcaacaaagaagcaggagtcccagaaaa
tcaaaaagtcaaaaacttcttaaagtggagacattgcctcccaaggtctccaccaataag
acgatagctcacattcctaagctgcaggatggtccctctcctgtcatggaggaaatggaa
gagaaactctctagtcaggtggaccagataagggctagactgatggtaaataaagccacg
gagcatgtgtccactgtagactccatgttttccccggtaacaacctgcaaaggtcagctg
atccaaatcaaccaatcacatttactggctgccctacagaaaactcatccatctgtcaat
gagaaagagagaagaaaatttcagaaaatttacgagaattttacttctacaaggggaggc
gactttggggcgtcagtggaacaaacgattggtagcagacagacacttgcttaa
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