Crassostrea virginica (eastern oyster): 111100714
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Entry
111100714 CDS
T09197
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111100714
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111100714
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111100714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8
Prok-RING_4
zf-ANAPC11
Ctr
Capsid_NCLDV
zf_RING_Vps8_fungal
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
111100714
NCBI-ProteinID:
XP_022288505
UniProt:
A0A8B8ABF2
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All DBs
Position
6:complement(32444697..32458501)
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AA seq
439 aa
AA seq
DB search
MPVDCPIPQHVTGLYVFAVINLICLFHASTVSCDIEVRRTLTNDTINSFEDELAGFGPDI
PTNGLYGYVLAMDSDTQTQKCTLHSSKIPAVNISDQMTWIALMQRNGCKFDEMVYSAQML
GFGAVIVYNRDGDDHIIKMGGDSTSKSVHIPSVFVGYTAGSIMKNNFQYDVNKTFYVKIS
RDEFIDKQYLIWPFAVVVGTCFVLMLLFMLFKWLRDCQKRRKSRLSSKHLKKIPVKKFKK
GDNYETCAICLEDYENGDKLRVLPCAHAYHCKCIDPWLTKRKKTCPVCKRKVIPGSNPDS
DSESSDEEGPTTSERTPLLAGNNNTPRRSTFDNSGLPEVVRPEVQRVQIMGHSHSSDSDS
FEDEIDTIEADITMETSSEEEDNAETGGEGRDGLNGISNAGFTDVESTSPRAEGSEQTQV
EVEVMGTQMGEEKVSNHIV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgactgtcccattccgcagcatgtgacgggactgtatgtatttgcagtcatc
aacctaatctgtttattccatgcatcaacagtgtcctgtgatattgaagtgaggagaacc
cttaccaatgacacaatcaattcgtttgaagatgagctggcaggttttggaccagacatt
ccaactaatggactctatggttatgtgttggccatggactcagacacccaaacacaaaag
tgtaccttacatagttcaaagatcccagcagttaatatatcagaccaaatgacctggatt
gcattgatgcagaggaatggttgcaagtttgatgaaatggtttacagtgcccagatgtta
ggctttggtgcagtcatcgtttacaatcgtgacggagatgatcatattatcaagatgggt
ggagactcaacttccaaatcagttcacatcccctcagtatttgttggatatactgcagga
agcatcatgaaaaacaatttccaatatgatgtcaacaaaacattctatgtcaaaataagc
agagatgagttcattgacaagcagtacctgatctggcctttcgcggtggttgtgggaact
tgttttgtcttgatgctcctcttcatgttgttcaaatggttgcgtgactgtcaaaagaga
agaaaatcacgcctttcttcaaagcatttgaaaaagattcccgtcaaaaagttcaagaaa
ggggacaattatgagacatgtgctatatgccttgaagactatgaaaatggagacaaactg
cgagtgcttccctgtgcccatgcatatcattgtaaatgtattgatccttggctgacaaaa
aggaaaaagacatgtccagtgtgcaaaagaaaagtgatccctggatctaatcccgactcg
gattcagaatcgtcggatgaagaagggcccaccactagtgaacgtacaccactgctggca
ggaaataacaatactccaagaagatcaactttcgacaattctggactgcccgaggttgtc
cgacccgaggtccagagggtgcagatcatgggccattcacactccagtgattccgactca
ttcgaggacgaaatagacaccattgaggcagacatcaccatggaaacttcctcagaggaa
gaggacaatgcagaaaccggtggggaaggtcgggatgggttgaatggcatcagcaatgca
gggtttactgatgtggagagtacgtctccccgggccgaggggtcggagcagacccaggtg
gaggtggaggtgatggggacacagatgggggaggagaaagtgtccaatcacattgtgtag
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