Crassostrea virginica (eastern oyster): 111101293
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Entry
111101293 CDS
T09197
Name
(RefSeq) transcription factor collier-like isoform X1
KO
K09103
early B-cell factor
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111101293
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111101293
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
111101293
NCBI-ProteinID:
XP_022289442
UniProt:
A0A8B8AD86
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Position
6:42720502..42742862
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AA seq
539 aa
AA seq
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MFITAAPPVSSLRSPDPPSMKEEPVAPVQNNPIRNWMQPTSLDQGGTVGFGRAHFEKQPP
SNLRKSNFFHFVLALYDRQGQPIEVERTAFIDFVEKDQELEGQKTNNGIHYRLQLLYANG
VRQEQDLFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSD
PVIIDRFFLKFFMKCNQNCLKNAGNPRDMRRFQVAICTTISVEGTLLAVSDNMFVHNNSK
HGRRARRLDPTDGDAWFFADSYTSRAFSRYPRDAGAITTPTIKAICPSEGWTLGGTTVII
IGDNFFDGLQVAFGSVFVWSELITSHAIRVQTPARQLPGVVEVTLSYKSKQFCKGAPGRF
VYTALAEPTIDYGFQRLMKLVPRHPGDPERLPKEIVLKRAADLAEALYSMPRNPNQLSLP
PPRSPAMTNGSPMSSFNPPYSGQLAVSIQDTNGQWEEGYTRGQGSSLSPRGYGSNGSTPH
SNGSGYSSAAMNGYHAPTGGLGNMGMSSLVTSPFSSVNPFALPTCNGQTYGSSIISPAK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttcattacggctgccccacctgtttcgtctctcagaagtcccgaccccccatccatg
aaggaggaaccggtcgcccccgtccagaacaaccccatcaggaattggatgcagcccacc
agtttggaccaaggggggaccgtggggttcgggagagcacattttgaaaaacagccaccg
agtaacctacggaaaagcaactttttccacttcgtgctagctctgtacgacaggcaggga
cagcccattgaagtggagaggactgccttcatcgacttcgtggaaaaagaccaggaattg
gaaggccagaaaacaaataatggcattcactatcggctccagttactttatgccaatgga
gttcgccaagaacaggacctctttgttcgtcttatcgactccgtcacaaaacaggctatt
atctacgagggtcaagacaaaaaccccgagatgtgccgagtgctgctcacacacgaggtc
atgtgcagtcggtgttgtgacaagaagagctgcgggaaccggaacgagacgccctcggat
ccagtcatcatagacagattcttcttaaagttcttcatgaaatgcaatcaaaactgcctc
aagaatgccggaaacccgagagacatgaggaggtttcaggtggctatctgtacgaccatt
tcggttgagggcacactactggcggtgtcggataacatgtttgtccacaacaactccaag
cacgggcgacgcgcacgcaggctggatcccacggacggagatgcttggttctttgccgat
tcgtacacatccagggccttcagtcgctacccccgggacgcgggggccatcaccacaccc
acaatcaaggcaatatgtcccagtgaaggctggacgctagggggcaccactgtaatcatc
atcggcgataacttcttcgacggtctccaggtggcgttcgggtccgtgtttgtgtggagc
gagcttattacgtcacatgccattcgtgttcagacccctgctcgccaacttccgggagtt
gtagaggtcacgctgtcctacaagtccaaacagttctgtaaaggggcgcccgggaggttc
gtctacacagccttggcggaacccaccattgactacggcttccagcgtctgatgaagctt
gttcccagacatccgggagatcccgaacggctaccaaaggaaatagtcttgaagcgagcg
gcggatttggccgaggctctctacagcatgccccgaaaccccaaccaactctctctaccc
ccaccacgctccccggcgatgactaacggctcccccatgtccagctttaaccccccttac
tctgggcagctggcggtcagcatacaagacacaaacggtcagtgggaggaaggatacact
aggggtcagggttctagtctttcccccaggggatatggctctaacggatctacgcctcac
agtaacggaagcggatatagctcggcagccatgaacgggtaccacgcccctactggtggc
ctaggaaacatgggtatgagtagcttggtgacgtcaccgttctccagcgtgaaccccttt
gctcttccaacgtgtaatggacagacatatggtagctctatcatatcgcctgcaaaatga
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