Crassostrea virginica (eastern oyster): 111101470
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Entry
111101470 CDS
T09197
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111101470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111101470
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111101470
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
CEP63
DUF1664
Nup49_C
DGCcoil
Motif
Other DBs
NCBI-GeneID:
111101470
NCBI-ProteinID:
XP_022289681
UniProt:
A0A8B8AE20
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Position
6:34735549..34748592
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AA seq
615 aa
AA seq
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MFGGGQPTTSGFSFGATPLAQQTTTATGGFSFGTPSTQPAGNVSFGTTPGQAPASTGAPS
FSFGGGTTPAAAQTGGFKLGAFSTPQSTAAPTAGFSLGGTTTAAASQPGGFKFGAPAGTP
APAFPGSTTGATAAAATGATTAPTVGFATPIASSTGGGLGGGLGGGLLGGIKPTLTSSTP
STLGGLFNTQTQAKPGGLLGATTSTGSVFSTPATTSQTVGLGGVDPKTSTATSGGSATDP
KAGDGKTLKKSQVPPELVKTVEDFKTYIKEEKSVQEGISRMSCKPMYRVQEDVASLRQLV
SIVSNGLQRNACAVEKLKREMTQELKNAEMAQRTRDIPAGLQYENTAPTEYFQRLVEDFE
TQMLSYRQQIETLEGHLHSISQPSILSPDELVDLLRKLHETFIALAAQLHQVHEAVKTQK
EHYLNYRKIFLHDTKNIFEREKKAVKPKGPAEHFGPSPFSGLSNAAAVAMASALTKSQQP
AAATAPPVAGLGTLGQTPGGFGSTGLFGATTTTAPAFGFGLGGSSTSTGTGFGGFGSGAT
TTTTASSGFPSLNTATVRPLGFGTPAPATNATSSLFGTPQAGQTPAFGTPPLFPSGGENQ
PFQLNKPPGSKRNKR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtggtggtcagccgacaacttcaggattctcatttggagccaccccgttagcc
cagcaaaccacaacagcaacaggtggattttcttttggcacaccctctactcagcctgca
gggaatgtgtcatttggtaccaccccagggcaggcaccagcctctaccggtgccccatca
ttcagctttgggggtgggactacccctgcggctgcccaaactggcgggttcaagttgggg
gccttttctacccctcagagcacagcggccccaacagcaggtttttcactgggggggaca
acaacagcagcagccagtcaaccgggaggtttcaaatttggagcaccggctggcaccccc
gccccagcatttcctggatccaccacaggtgccacagcagcggcagccaccggtgccacg
actgcacccacggtggggttcgccaccccaatagcgagcagtactggtggggggctggga
ggggggctaggaggggggctcctgggagggattaagcccacactgaccagcagtaccccc
tccacactaggagggctgttcaacacacagacccaggccaaacctggtggattgctggga
gctaccacttcaacaggtagtgtgttcagtacgccggctaccacctcccagacggtggga
ttaggaggagtggatcccaaaacttcaaccgccacttcagggggatctgcaacagaccct
aaggcaggagatgggaagactcttaagaaaagccaggttcccccagaactggtgaaaaca
gttgaagattttaagacatacatcaaggaggagaagtcggtccaagagggaatttcccgg
atgtcctgtaaacccatgtacagggtccaggaggatgtggcctctctccgacagctggtc
tccattgtgtccaacggactgcagaggaacgcctgcgctgtggagaaactcaagagggaa
atgacacaggaactgaaaaatgccgagatggcccagagaacaagagacattcctgctggt
cttcagtacgaaaacactgcacccacagagtactttcagcgtttggtggaggactttgag
acccaaatgttgtcgtatcgacaacaaatcgagaccttggaaggacacctgcactcaatc
agccagcctagtattctatctcctgatgagctggtggaccttttgaggaaactccacgag
accttcatagccctggctgctcagctgcatcaggttcacgaagcagtgaagacccagaag
gaacactatctaaactacagaaaaatcttccttcacgacaccaaaaatatctttgaacga
gagaaaaaggcagtaaagcccaagggccctgctgagcattttggccccagtccattctca
gggctttccaatgctgcggcggttgccatggcctcggccctgactaagtcccagcaacct
gcggcagccactgcaccaccggtggcgggccttggcactctgggacagacccctggtggt
tttgggtccacgggattatttggagccacgacaaccaccgctcctgcatttggatttggt
ctgggaggttcctccacctctacaggcactggatttggtgggtttggttccggggccacc
accaccaccaccgcaagctccggctttcccagcctgaacaccgcaactgttcgtccatta
ggttttggaaccccagcacctgccactaatgcaacgtcatcactgttcggaacacctcag
gctgggcagaccccagcattcggaactcctccgttgtttccctcagggggagagaatcaa
ccatttcaactgaataaaccaccaggaagtaaaagaaataaaagatga
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