Crassostrea virginica (eastern oyster): 111101598
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Entry
111101598 CDS
T09197
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5-like isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111101598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111101598
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111101598
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
HECT type E3
111101598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
111101598
NCBI-ProteinID:
XP_022289882
UniProt:
A0A8B8AEG6
LinkDB
All DBs
Position
1:complement(21868636..21896883)
Genome browser
AA seq
2981 aa
AA seq
DB search
MTSIHCVVHALPGSDTQLNDRIRDVAEKISHHGFNSPPAFSALTNVTVTQCAVGPNYLAF
LLEDGRVCRLSYAIAVDKLDLNKSDGKSKPVSRPERSERTSGIPSRSSSLVVESPMVLVS
DVLNSNTDPPTGRWGSGTTTISGSTTTRSQPAYSRMQRTVHVSRGRRSGVIVGSRPLVPA
SVVPEDLISQCQVVLQGKSRNLIIRELQRTNLDVNQAVNNLLSRDDEGEGEDEDSQDSYM
PDDLISLLDGGMHSEHPSVIIDADTMYNEDVFGYSTLRSRTSGTRSRLGDRDRDLDRESR
ESIFRIRDRRRLDTTLRDETLKSLERDKVDSSLEGENLKKQVPPSQTPVNFGDDVHFMTE
KDGTHSTFTHIAAMHSDLVAVGTDGQLYSWKWNESEPYKHHDNPSIRHPKVLALGLQNER
IMGLSACGVRASVFTESNKVATWVDDTLNSVASRLEHPAQTFPEFQSDRIVSLHTCSLYT
CTRLESSALYWWGIMPFGQRKKMLEKTKKKKSKDGSVSSELAAGSLVCLRSSPMYHSGAL
AFATIDGVPKVGQLLESAWSLSDTCRFKILKQTPLEPKPEVKIEVKSCDVKPDMPPPPSP
DSSTCSDHSGPTLISTSLKRKKAPTPLKDLEKKDEENWPLKNVIFVEDVKTVPMGKVVKV
DGAYAVVKFQSRDALDSGVGREDPISLLQDCRILRKDELQVLKSANAPRLPDCFQKTPKK
VTLTESGQILAVAVDCEGIHLIARSGSRLSYTIYNLTTGKVDQDATFQTDAQTFLGENRS
DITLHNTGDELLVQLQDGNGALYPLAKDCAEGIRDPLWLNLPPVRALGIRVQCLTPLGTN
LKNKACVLVLAVEHQVLVPHILRCDVDKVKSILSSLEQEQDSAAGQKMLQDIFKEHCDGN
RNILHTCVAMCSPTSNKDYDQEPVSLSTAAGPNPAATTSSSSFSSALEAINAVSSAVDAL
NAIQSRTTDPSSRCVNLREMMKRASSAARAVSGIDVRESEDMSIPTLQWPPDPPSYETLQ
QEHSLSRQSSSGLGAPLVSGEFSTVSIPPVKLEEKERRVNAMAILKLLCECPQLQRHLVE
LLSARNADGCTVFMQAVRSCAYAAALVVLDTAKKVATNESGWLDRATFMQMLYPTGSSLD
NSPLQMLCCNDTCSFTWTGREHIKQDIFECKTCGLVGSLCCCTECARVCHRGHDCKMKRT
SPTAYCDCWEKCKCKALIAGQQQPRFELLNRLLAETDLVKLPNSRGENILLFLVQTVGRQ
LIEQRQYRPNRTRVPTSRKAITQDPDAEMPEHDLEPPRFSRRSLERILNDWTAVKAMIMS
GKKGTSSPDVVYEDQLYLDSQSGTARLDKFTHTLLVKCSVEMLDTLLTTLIREMQNDNTE
GRRSEARTVTRRFLRSVARIFVVLNIEMTPATNKKKSSSITACQPLIRCKRAFNALITIA
IEELCEIADSLIAPVRMGVLRPTAPFTLATANIDAIQGSEEIFNIDPLPPRSHPADSENH
SVSYISHPRISPSESSQRRGQDREEDEILQQEEEAVEGMGGDDDQSDHEDRDDHQSEHSD
QDQVDNEGGAAESDMDLDLLAESESDSESSHSNQDNVSVQRSAVTAATAGSDAGLGSLAH
FSEDSGESSNQEEDYESEGEQSNDGNDADDMNYIDEQLERCHTSGSHGQRTLQAPQTMQW
AIRQRETPATRPPPASGTTTTAGGTGGLIYIDPATMRRTSTVTTTTVHHHQESQVTMTTT
ASQLARAFSVVVRQVADLLTMIQDYNALAPGLPRVLEISDQEASDLQCYTEMHLSLTWDW
LIDIMDSTEAQLRFGAALCHTTDPANPNHPFHSNYVRNLRERTNREESRILQALDRRRAR
FGTIGGDGNLARREFLNYALSLMRSHNDEHADSLPSLDISSMRHVAYVFDALIYYMRSGI
DTDADVFRDGISVISWDHDENENEDHDDDPVTNMSVDNESVDGESDVTTKSGRKHPFFHR
SDSTTFLGCPPPDPFQTPLVQALPLADQPHLLQPNARREDLFGMIRQTVVPFRSATDIKT
AQKMSGSRNQFDKLPIRMALSERRPGSSLIQTGTLPMPPVPGSLNQPGPSHLPDVAFSGP
SVIVKPPSQTLANPMTASQPSQESSAVSSIPLPGQGPDTVKAHEVLNQASVIVHSSSAQG
LPVQGPAYAGSPIPEPRFLAGDRRMDSSVPLGTSQSESLDRSMDTQSLSVGSLPSESPGT
SLLSGATTQCSTGGTSSSLTKSHTDNSSMSTDAPPDRGLLESRSLHSLSSDSLSESVPFP
DQIPGPSTVEMTDQRASSSSDGPSMQASYNDSLPTGSADNGLDLVGAHENVCNTVDIETS
AVPPGLGPVRMNPLSNLVSHDVLLGRWRLALDLFGRVFCDDVGAEPGSVISELGGFPVKE
SKFRREMEKIRNSQQRDIILDVERDRNLLIVQSFKQLNTQYNRRTNTSGPPLAVHRVKVT
FKDEPGEGSGVARSFYTAIANAVLSQEKLPSLDGVLIGGKNLQYNLLQRARSRERERERL
AQRTSLRRQRSRERDTRRTLSYDATPFYMPADPPTPNNNPSSVGPPSSDSSNDGAPDNVS
QYRRQLGERLYPKVRALQPSLAPKITGMLLELSPAQLLLMLTSEETLRQRVDEAVDIIMS
HGRELSAEALLDLDIFNLSASDKKKKPTERKSEVEEEEELEDNSPLFWQPGKRGFYSPRP
GKSTPERLNAFRNVGRIIGLCLLQNEMCPLFLNRHVLKYILGRKIGWHDLAFFDPVMYES
LRQLVLDSEHKDASVLFAALDMNFFVQLGAEEGGEEVELIPGGNDIEVNAQNVHDYVRRY
AEFRMVKVLEKALKHIKLGVFDVIPSNSLEGLTAEDLRLLLNGVGDINVQTLISYTSFND
ESGENNDKVQRFKRWFWSVVEKMNNQERQDLVYFWTSSPALPASEEGFQPMPSITIRPAD
DDHLPTANTCISRLYIPLYSSKIVLRSKIILAIKTKAFGFV
NT seq
8946 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatacattgtgtggtccatgctctccccggaagcgacacacagctaaacgac
aggattcgtgatgtggcggagaagatcagtcaccacggcttcaacagccccccagcgttc
agtgccctgaccaacgtaactgtcacacagtgcgcagtcggaccaaactacctggctttc
ttgttagaggatggacgggtctgtagactctcgtatgctattgctgtggacaagctggac
ttgaacaagtcagacggaaaatctaagcccgtgagccggccggagcgcagcgagaggacc
tcgggaattcctagcaggagtagttccctggtggtggagagtcccatggtcctggtgtcc
gacgtcctcaactccaacaccgacccccccacagggcggtggggaagcggcaccactaca
atcagtggatccaccaccacccgcagtcagccagcctacagccgaatgcagcggaccgtc
catgtcagccggggtcggaggtcaggggtcattgtgggaagccgacctctagtgccggcg
tctgttgtaccggaggatctgattagtcagtgtcaagtggttttacagggaaaatctcgg
aacctgatcatcagggaattacaaagaacgaacctggacgtgaaccaggcggtgaacaac
ctgctgagccgggacgacgagggggagggggaggacgaggacagccaggactcctacatg
ccggacgacctcatctccctgctggacggcggcatgcactcggagcaccccagcgtcatc
atcgacgccgacaccatgtacaacgaggacgtgttcggatactccacgctccgcagccgc
acctcggggactcgctccaggctaggtgacagggaccgtgacctggacagagagagcagg
gagtccattttccgcatcagagaccgccgacgtctggacaccacactgcgggacgagacc
ctcaagtcgctggagcgcgacaaggtggattcctctctagagggagagaacctgaaaaaa
caggtgcccccatcacagacccccgtcaacttcggagacgacgtacacttcatgacagag
aaggatggtacccactcgaccttcactcacatagctgccatgcactctgaccttgttgcc
gtgggaacagatggacaactttacagctggaagtggaatgagtcggagccttacaaacac
catgataaccccagcattcgtcatcccaaggtgctggcgctgggcctacagaatgagagg
atcatgggattgtccgcctgcggagtgcgggcgtccgtcttcaccgagtctaacaaggtg
gctacgtgggtggacgacacgctgaacagcgtggcctcacgattggagcatcccgcccag
accttcccagaattccagagcgaccgcatcgtgtccctgcacacctgctcgctgtacacc
tgtacccggctggagagcagcgccctctactggtggggaatcatgccgttcggacagagg
aagaagatgctggagaagaccaagaaaaagaagagtaaagacggatcagttagcagcgag
ctggcggccggatcactggtgtgtctgaggagctcccctatgtaccacagtggagccttg
gcttttgccactatagatggcgtccccaaagtaggtcaactcctggagtcagcctggtcg
ctctcggacacctgtcgcttcaagatcctcaaacagactcctctggaacctaagcctgag
gtgaagatcgaggtcaagtcatgtgacgtgaagccagacatgcccccacccccctccccc
gactcctccacctgtagtgaccacagtggccccaccctcatcagtacctccctcaagagg
aagaaggcccccacccccctgaaggacttggagaagaaggacgaggagaactggcccctc
aagaatgtcatctttgtggaggacgtcaagaccgtccctatgggcaaagtcgtcaaggtg
gatggtgcatacgctgtggtcaagttccagtcccgcgacgccctggactccggggtgggg
agagaagaccccatcagtctgttacaggactgccggatactgaggaaagacgaactacag
gtattgaagagcgccaatgccccccgcctaccagactgcttccagaagacccccaagaag
gtcaccctgacagagagtggacagatactggcggtcgctgtcgactgtgaaggtatccac
ctgatcgcccggtccggatctcgcctcagctataccatctacaacctgaccaccgggaaa
gtggatcaagacgccacgttccagacggatgcgcagacgttcctgggagagaatcgcagc
gacatcactctacacaacacaggagatgagctgttggtgcagctacaggacgggaacgga
gccctctaccccctcgccaaggactgtgcggaggggatacgtgaccccctgtggctgaac
ctgcccccggtccgagccctggggatcagggtgcagtgtctgactccattagggacaaac
ctgaagaacaaagcctgcgtgctggtgctagctgtagagcaccaggtgctggtcccccac
atcctacgctgtgacgtggacaaagtcaagtccatcctgtcgtctctggaacaggaacaa
gactctgcggccggacagaagatgctccaggatatattcaaggaacactgtgacgggaac
cggaacatcctgcacacctgtgtggccatgtgttcccccacctccaacaaggactacgac
caggagccggtgtccctatccaccgcggcgggccctaaccccgcggccaccaccagcagt
agttccttcagctccgccctggaggccattaacgcggtcagcagcgcagtggacgcactc
aacgccatccagtcacgcaccaccgaccccagctcccgatgtgtgaacctgcgcgagatg
atgaagcgagcctcgtccgctgcccgagcagtcagtggtatagacgtcagggagtcagag
gacatgtctatccccaccctgcagtggcccccggacccccccagctacgagaccctccag
caagaacacagcctctctcgtcagtcctccagtggtttaggagcccccctagtgtcgggg
gagttcagcacggtctccatccccccagtcaaactggaggagaaggagaggcgggtcaat
gccatggccatcctcaagctcctgtgtgagtgtccccagctacagcgccacctggtggaa
ctcctgtcagcaaggaacgctgatggatgtacagtgttcatgcaggctgttcggagctgc
gcatatgcggcagctctggtggttctggacacagcaaagaaggtcgccacgaacgagtcg
ggctggctggaccgtgccacgtttatgcagatgctctaccccacagggtccagcctagac
aactcccccctacagatgctgtgttgtaacgacacctgtagttttacttggacggggcgg
gaacacatcaaacaggacatctttgagtgcaagacgtgcggactggttggctcattgtgc
tgctgcacagagtgtgctagagtgtgccatagagggcacgactgcaagatgaagcggacg
tcacccacagcctactgtgactgctgggagaagtgtaagtgtaaggccctgatcgccgga
caacaacagcctcgctttgagttgctgaatcgtctgctggcagagaccgacctggtgaag
ctccccaacagcaggggggagaacatcctgctgttcctggtccagacggtgggcagacag
ctgatagaacagcgacagtaccgtcccaacaggacgcgtgtccccacctcccgtaaggcc
atcacccaggaccccgacgccgagatgccagagcatgacctagaacctccccggttcagt
cgccgctcactggagcgaatcctgaacgactggacggcggtcaaggctatgatcatgagc
gggaagaagggaaccagttcaccggacgtggtgtacgaggaccagttgtatctggacagc
cagagcgggacggctcgcctggacaagtttacccacactctgctggtcaagtgcagcgtg
gagatgctggataccttactgacgacgctgatccgtgagatgcagaacgataacaccgaa
ggtcgaaggtcagaagcgaggaccgtgactcggagattcctccgatctgtggcccgtatc
tttgtcgttctgaacattgagatgacgcctgctacaaacaaaaagaaaagttccagcatc
acagcctgccagcccctaatcagatgtaagcgagcctttaacgcgctgatcactatcgct
attgaggagctgtgtgagattgcggactctctgatcgcgccggttaggatgggggtgtta
cgcccaaccgcacccttcaccctggccaccgccaacatcgacgccatacagggtagtgag
gagatattcaacattgacccccttccccccaggtcccaccctgcggactctgagaaccac
tctgtgtcctatatctcccacccccggatctcccccagtgagtcctcccagaggcggggt
caggatcgggaggaggacgagattctacaacaggaggaggaagctgtggaggggatggga
ggggacgacgaccaatcagatcacgaggatcgggacgaccaccaatcagaacactcggat
caggatcaagtggacaatgagggaggtgctgctgagagtgacatggaccttgaccttttg
gccgagtcggagagtgacagtgagagtagtcatagcaaccaggacaatgtcagtgtgcag
cgtagcgctgtcaccgcggcaacagcaggatctgatgcagggttgggaagtctagcccac
ttttctgaggattcaggtgaatcatccaatcaggaggaagattacgagagtgaaggagag
cagagcaacgacggcaatgacgcagatgacatgaactacattgatgaacagttggagcga
tgtcacacctcaggatcccacggtcagaggacgttacaggcgccccagacaatgcagtgg
gccatcagacagagggaaacccccgcgacccgacctcctcctgcctcaggcaccaccacc
accgcaggaggaactggtggtctgatttacattgaccctgccaccatgaggagaaccagt
acagttaccacgacaacagtccaccatcaccaggagagtcaggttaccatgacgaccacg
gccagtcagctggcccgagccttcagtgtggtggtccgccaggtggccgacctactgacc
atgatccaggactacaacgccctagccccggggctccccagggtcctggaaatctccgac
caggaagcaagtgatctacagtgctacaccgagatgcatctgtcccttacctgggactgg
ctgatcgatataatggattccacggaggcacagctacgcttcggggcggccctgtgtcac
accactgatccagccaaccccaatcatcctttccactccaactacgtccgcaacttgcga
gagcgaacaaaccgtgaggaaagtcgcattcttcaagctctggacagacgacgagctcga
tttggcaccatagggggtgatggtaacttggctcgccgtgagtttctgaattacgccctg
tctctgatgagatctcacaacgacgagcatgcagactcactgccgagtcttgatatctcg
tccatgagacatgtcgcctatgtgtttgatgctctgatctattacatgcggagtggaatt
gacactgatgctgatgtattcagggatgggatctctgtcatctcctgggatcacgatgag
aatgagaatgaggatcatgatgatgatcctgttaccaacatgtccgtggacaacgagagt
gttgacggagagtcggatgtgaccaccaaatctggcaggaaacatccgttcttccatcga
tccgactccaccaccttcctcggctgtcctccaccagatcctttccaaacacctttggta
caggctctgccattggccgatcagccacatctcctgcagcccaatgccagaagggaggac
ctgtttggaatgatacgtcagacggttgtaccattcagatcagcgacagacatcaagaca
gctcagaagatgtctggcagcagaaaccagtttgacaagctgcccatcagaatggccctc
tccgagcgacgcccgggtagcagcctgattcagacaggaactctccctatgccccctgta
ccggggtctctgaaccagcccggaccctctcatctccctgacgtggccttcagtggacct
agcgtcatcgtgaagccgccatcccaaactttagccaatccgatgactgccagccaacca
agtcaggagagcagtgcagtcagcagtattcctttgccggggcagggtccagacacagtg
aaggcccacgaagtgttgaatcaggccagcgtcatcgtacattccagctccgctcagggt
ctcccagtgcagggaccagcttatgctggttcccctatcccagagccacggtttctggca
ggggaccgacgaatggactccagtgttcccctgggcaccagccagtcagagtctctggac
agaagcatggatacccagtccctctctgtgggttccctcccttcagaatccccagggacc
tccctgctgtcaggagccaccacccaatgtagcacaggggggacctcctcctccctcacc
aagagccacacagacaacagcagcatgtccacggacgccccaccagacagaggtctgctt
gagtcccgctccctgcactctctgtcttccgacagcttgtccgagtctgtgccattcccg
gaccagatcccaggcccctccactgtggaaatgaccgaccagagagcctcatcctccagt
gatggcccctccatgcaagccagttacaacgactccttaccgacaggttcagcagacaat
ggactggatttagtgggagcacacgagaatgtgtgtaacactgtggacatagaaacttca
gctgtacccccaggtctgggaccagtcagaatgaaccccctcagtaatctggtgtcacat
gacgtgctgctgggacgctggcgtttggcccttgacctttttgggcgtgtcttctgtgat
gatgtcggggctgagccgggctcggtcatcagtgagctgggaggcttcccggtcaaggag
agcaagttccgcagggaaatggagaaaatccggaactcacagcagagggacatcatacta
gatgtggaaagagacaggaatctgttaattgttcagtctttcaaacaactcaacactcag
tacaacaggaggaccaacaccagcggtcccccactggcagttcacagggtcaaggtcacc
ttcaaggacgagccgggagagggcagtggggtggcccggagtttctacactgctatagcc
aatgctgttttgtctcaagagaagctcccctctttggatggtgtattgattggtggcaaa
aacctacagtacaatttactacagagggctcggtctagagagcgggagcgagagagactg
gcccagagaaccagtctacggcgccagcgcagcagggagagagacaccagacggactctg
tcctacgacgccacccccttctacatgccggcagacccccccacccccaacaacaacccc
agttctgtcggtccgccatcctccgactccagtaacgatggagcccccgacaacgtgtca
cagtaccgccgacaactgggggagaggctgtaccccaaagtcagggcactacaaccgtct
ctggctcctaagatcacgggaatgttactggaactgtctcccgcccaactcctgctgatg
ttgacatcagaagagacactgagacagcgagtggatgaagctgtggacattatcatgtca
cacggaagagagttgagtgctgaggctctgttggacctggacatcttcaatctgtcggcc
agcgacaaaaagaagaaaccgacggagcgtaaatctgaggtggaagaggaggaagagctg
gaagataacagtccgttgttctggcaaccgggtaaacgtggcttctactcgccgcggccc
ggcaaaagcacgcccgagagactcaatgccttcaggaatgtggggagaataattgggctt
tgtttgttacaaaatgagatgtgtccgttattcctgaaccgtcatgtcctgaagtacatc
ctgggtcgtaagatcggctggcacgacctggccttctttgacccggtgatgtacgagagc
ctgcgtcaactggtgctggactcggagcacaaggacgcctcggtgctgtttgctgcgctg
gacatgaacttctttgtacaactcggagcagaggagggtggggaggaggtggaactgatc
cccgggggtaacgacatcgaagtcaatgcccagaatgtccacgactatgtgcgccgctac
gctgagttcaggatggttaaggtcctggagaaggctctcaagcacattaagctgggggtg
tttgacgtgattcccagtaactccctggagggcctgactgcggaggatctacgacttctg
ctgaacggcgtgggggacatcaatgtacagaccctcatcagctacacctcattcaatgac
gagagcggggagaataacgacaaggtgcagaggttcaaacgctggttctggtccgtggtt
gagaagatgaacaaccaagagagacaggacttggtgtacttttggacgtccagccccgcc
cttccggccagtgaggagggattccagccgatgcccagcatcacgatccggccagccgac
gacgaccacctgccaacggccaacacctgtatatctcgtctgtacatcccgctgtactcc
tccaaaatcgtgctacgcagcaaaatcatcctggccattaaaactaaggcctttggcttt
gtgtaa
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integrated database retrieval system
