Crassostrea virginica (eastern oyster): 111101630
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Entry
111101630 CDS
T09197
Name
(RefSeq) DDB1- and CUL4-associated factor 10-like
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111101630
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111101630
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
111101630
NCBI-ProteinID:
XP_022289905
UniProt:
A0A8B8AFF2
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All DBs
Position
6:42965180..42969749
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AA seq
646 aa
AA seq
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MTCKDAKFTPLFWLKNRELGHTISSLEARSFRGGIFSSLKAVHKWDPLKTVDSTHHGGIF
NFDFSPDGSLLAAACEGQSILLFDPFNGRLIGEKSKAHTDCVNIVKFLDSRLFATCSDDS
TVALWDVRFLKQKLHELKGHTNWVKNIEYDRNTGLLLTSGFDGNIFTWDINRYTETETKG
DKVFTYKLLMRSKLSPDSSKLVVSTQNGYIIVIHDLDLLTLADDLKNFPAYGSPTSFPPQ
RNQRRNRVELIREWPSGDNASDIASLQIHPHGWCVMSRNVSRDKKSEWTCIHDLQEPIKR
RETREFSVMPHTSCGQSSSTYTPASASTAPTTVVTTAPRTATSQGTFIQTQTAPSIIINP
TYSEDSAMGTVSAPSIVINPPTFSVEGRQSAENSTRSSRNGPSALVINSNPSSGSDDFQS
SVTIHISTQAGPSTSQQRWRNVSNSEAYTASSSDSSPHLEWGLNHPSDRETESHDDLSSD
SSADESDVEFMTPEVRMRAETVSDSHQYRDLVAFIVRYDVNRGIIDVNPRVRLGSAYDNP
SSRTTDRLLYYTEEPNVARGFIKEICFSSDGRLICSPFGFGVRLLGFDPLCSELCDVVPS
QPIRLYEVANCLSHSNIVVTCKFSPRHCMFVSGCLSGKVMFHQPVL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgtaaagatgccaaatttactcctttattttggctgaagaatagggaacttgga
catacaatatccagcttggaagccagaagtttccgtggagggatattttcttctttgaaa
gctgtccataaatgggaccctctgaaaacagtggattctactcatcatggtggaatattc
aactttgatttctctccagatggatccttgttagctgcagcgtgtgaaggccagagcatc
ctgttgtttgatccgttcaatggtcgcctgattggagaaaagagtaaagcccatacagat
tgtgtcaacattgtcaagtttcttgattccagattatttgcaacatgttcagatgactct
actgttgcattatgggatgtaagatttttgaaacaaaaactacatgaacttaaaggccac
acaaactgggtcaagaacattgagtatgaccgtaatactggtcttctccttacctcaggg
tttgatggcaacattttcacctgggacattaacaggtacacagagacagaaacaaaggga
gataaggtcttcacctacaaactgttgatgcggtctaagctgtcccctgattcctctaaa
ctcgtggtatctacccagaatggatacatcattgttattcatgaccttgacttgttgacc
ttggcagatgaccttaaaaactttccagcttatgggtcacctacatcttttccaccacaa
cgaaatcagcgacgcaatagggtcgagttgattcgagaatggccgtcaggggacaatgcc
agtgacatagcatctctacagattcatccacatggttggtgtgtgatgtccagaaatgtc
agtcgagacaaaaaatcagagtggacatgtatacatgacctgcaggagccaatcaaaaga
cgggaaactcgggagttttctgtgatgccccacacgtcctgtggccagtcctcctcaacc
tacaccccggcgtcggcctccaccgcccccaccaccgtcgtcaccaccgccccgcgcacc
gccacctcccagggaaccttcatccaaacccagacggcaccatccatcatcattaacccc
acatactctgaagacagtgcaatgggcacagtcagtgccccctctattgttatcaatccc
cccaccttcagtgtagaggggcgacaatcggcagaaaactccacgaggtcttccaggaat
ggcccgtcagctcttgttataaattccaatccctcgagtggatccgatgacttccagtcc
tctgtgactatccacatttccactcaggccggtccctccactagtcagcagagatggagg
aacgtgtcaaattcagaggcatatacagcaagttcctcggattctagccctcacctggag
tgggggctgaatcatccaagcgaccgagagacagaatctcacgacgacctcagttctgat
tccagtgctgacgagagtgacgtagaattcatgactcctgaagtccggatgcgtgcagaa
actgtctctgacagtcatcagtatagggacctcgtggcattcatcgtcagatacgatgtg
aaccggggaattattgacgtcaacccaagggtgcgattgggcagtgcctatgataaccct
tcttcacggacaactgatagacttttgtattacactgaagaacccaatgtggcgagagga
ttcataaaagagatctgcttcagttcagatggtcgattaatttgttccccgtttggattt
ggcgttcgtctcttggggtttgatcctctgtgtagtgagctttgtgatgtggtgcccagc
cagccgattcggctctatgaagtggccaactgcttgtcccacagtaacattgtggtgacg
tgtaaattctcaccaagacactgcatgtttgtctcaggctgtctgagtggtaaggtgatg
tttcaccaaccagtgctctga
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