Crassostrea virginica (eastern oyster): 111101712
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Entry
111101712 CDS
T09197
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03013
Nucleocytoplasmic transport
cvn03015
mRNA surveillance pathway
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111101712
09122 Translation
03013 Nucleocytoplasmic transport
111101712
03015 mRNA surveillance pathway
111101712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111101712
03041 Spliceosome [BR:
cvn03041
]
111101712
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
111101712
Spliceosome [BR:
cvn03041
]
Common components
Common spliceosomal components
Cap binding complex
111101712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
111101712
NCBI-ProteinID:
XP_022290006
UniProt:
A0A8B8AI63
LinkDB
All DBs
Position
6:complement(18031242..18034261)
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AA seq
162 aa
AA seq
DB search
MSAFRAKFPSGSVALSAYRDQHYKGSRAEQEKALLTSSTLYVGNLSYYTTEEQIHELFGK
CGDIKRIIMGLDKVKKTPCGFCFVEYYTREDGENAMRYVNGTRLDDRIIRTDWDHGFKEG
RQYGRGKSGGQVRDEYRTDYDEGRGGYGKIVATKITQARDPM
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttcgtgcaaaattcccctcaggttctgtcgcgctcagcgcctatcgtgac
caacattacaagggaagtcgagctgagcaagagaaggcactgctgacctcctccaccctg
tatgtggggaacctctcgtactacaccaccgaggaacagatccatgagctgtttggcaaa
tgtggcgacatcaagcgcatcatcatgggtttggacaaggtcaagaagacgccctgcgga
ttctgttttgtcgaatactacacaagagaagatggggagaatgctatgaggtacgtgaat
ggcactaggcttgacgaccggattatccgtacagactgggaccacggatttaaggagggg
aggcagtacggtcgcggaaagagcgggggacaggttcgagatgaatacagaacggattac
gacgaaggaagaggaggatatggaaaaattgttgctaccaaaattacacaggcacgtgat
cccatgtga
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integrated database retrieval system
