Crassostrea virginica (eastern oyster): 111102690
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Entry
111102690 CDS
T09197
Name
(RefSeq) RNA-binding protein 28-like
KO
K14573
nucleolar protein 4
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111102690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111102690
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111102690
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
111102690
NCBI-ProteinID:
XP_022291247
UniProt:
A0A8B8AI98
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Position
7:complement(24601178..24613060)
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AA seq
846 aa
AA seq
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MAVDKSGEHVERKSKTLFVRNLPYSATNEKLESLCSEVGPIRSCFIVKEKDSQKSKGYGY
VTYSMFEDAEAASSRIMSLDGRRLYVTFANKKKKEKRKAKVKSEENTDEEPEQYSDAEDE
KPVLPRLHEMEKQRTHSQQELKYLRAKTLVIEGWSPKHAQADVEEAMAKLNVKNVAKIIF
PAPDRPAPCALVRFKSIRDTNRALRKIEGKEVKECILKACQLSKESAPTPPSKPQKTERK
ARLIIRNLSFKCSEEKLKESFEKFGEVTEVQIPKFKNGKLQGFGIVQFKELDDASKAITG
MNAKPILGRPVAVDWAIAKDRYEAKMCKIEAYDTSNTEEVKLNGSVKQKNVSSLAAEKNI
LPKGKVKEEISEDSESGDDDENSETSGEGDDVEGEHSEEEFENEDSDEEVDDDDDDDDDD
DDGSSESEDDAIKKKKKGNVHHKNDVGEGRTMFIRNVPFDTDEESLEDAFSEYGKINYVK
MVINPKTGQPKGTAFVQFKTKTDAENFRSAAEDEEEGIVIDGRRLVVMEALERKKAQELT
SKESKVKEDKRNLHLVREGMIRPGTQAAIGLSKEDLVKRTKLENSKRAKLKNPNIFVSAT
RLSVHNLPTQVTDRQLKTVFLKAADSKAAVITECRIMRDLDRTDNKKLGKSRGFAFVNFS
CHEHALNALRNANNNAELFGEKKRLIVEFSLENKAALEAKEKRLERQKARLASLKKGKEK
NSTDGTTDEKLSKKQQKSKGPKIVEKFIGTLPFREDTKKLPKGLPSHWGAKVRHKPRPAV
TSTNKKSKNQAVKRKAEEGSGVTGPQIKTTKPKKRKMEREDDFDKLVNKYKQNMLTKSVK
SKWFDQ
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgacaaaagtggtgaacatgtggagaggaaatccaaaacactgtttgttcga
aatttgccgtactcggcaacaaacgagaaactcgaatcattatgtagcgaagttggtcct
atcagaagctgttttatcgtaaaagagaaagattcccagaaaagtaaaggctatggatat
gttacgtattccatgtttgaggatgctgaagcagcatcatcaagaattatgtcccttgat
ggcaggaggctgtatgtcacatttgcaaacaaaaagaaaaaggaaaagaggaaggcaaag
gttaaatcagaagaaaacacagacgaagaaccagagcaatatagtgatgcagaagatgaa
aagccagtcctccctcgcttgcatgaaatggaaaaacagagaacccatagtcaacaggaa
ttgaagtatttgcgtgcgaaaactttggtcattgagggttggtcaccaaagcatgcccag
gcagacgtggaggaggcaatggcaaaattgaatgttaagaatgtagccaagataatattc
ccagcccccgatcggccagctccctgtgcccttgtccggttcaaatccatcagagacacc
aacagagctctcaggaaaatcgaggggaaggaggtcaaagagtgtattctgaaggcatgt
cagctgagcaaagaatctgcccccacccctcccagtaaacctcagaaaacagagagaaag
gctagactgatcatcaggaatctttcatttaagtgttctgaggagaaattgaaagaaagt
ttcgaaaagtttggagaagtcacagaggtgcagatcccaaaattcaaaaatggaaaactg
caaggatttggaatcgttcagtttaaggaactagatgatgcatccaaggccatcacaggc
atgaatgcaaagcctatccttggtcgtcctgtggctgtggattgggccattgctaaggac
aggtatgaagctaaaatgtgtaaaatagaagcctatgacacttctaacacagaggaggtg
aagctcaatgggtcagtgaagcagaaaaatgtgtcttctctagcagcggaaaaaaacata
ttgcccaaaggaaaagtgaaagaagagattagcgaagactccgagtcaggtgatgatgat
gaaaattctgaaacatctggagaaggggatgatgtagaaggggagcactcagaggaagag
tttgaaaatgaggattctgatgaagaagtagatgatgatgatgatgatgatgatgatgat
gatgatggaagttctgaaagtgaggatgatgcaattaaaaagaagaaaaaagggaatgtt
catcataaaaatgatgttggagaaggtcggacaatgttcatcagaaatgtgccatttgac
acagatgaagagagtttggaggatgctttttcagagtatggaaaaataaactatgtgaaa
atggtgatcaaccctaaaacaggacagcctaaaggtacagcatttgtccagtttaagact
aaaacagatgcagaaaactttcggtctgctgcagaagatgaagaggaaggcattgtgatt
gatgggcggcgattggtcgttatggaggccttagagagaaaaaaggcccaggaactgacc
agtaaagagtcaaaggtcaaagaggacaaaagaaacctacacctggtcagagaaggaatg
attcgaccaggaacgcaggctgccataggactttctaaggaggatctcgtgaagagaaca
aagctggagaactctaagcgggccaagttgaagaaccccaacatctttgtctcagccacc
agactgagtgttcacaaccttcccacacaggtgacagacagacagctcaagactgtgttc
ctaaaggcagcagacagcaaggcagcagtcatcacagagtgtcgaattatgagggatcta
gataggacagacaataagaagcttgggaaatcacgaggtttcgcctttgttaatttctct
tgtcacgagcatgccctgaatgcgctgaggaatgccaataacaatgcagaattgtttggg
gaaaagaagaggttgatcgttgagttttctctggaaaacaaagcagcattagaggccaag
gaaaagcgattagaaagacagaaggctcgcttggcgtcattgaaaaaaggcaaggaaaag
aattccaccgatggaactactgatgaaaagctctccaagaagcaacagaagtctaagggt
ccaaagatcgtggagaagttcatcgggaccttaccgttccgggaggatactaagaaactc
cccaagggtctcccctcacactggggggccaaagtccggcacaagccccgccctgcggtc
acctccacaaacaaaaagtccaagaaccaggccgtcaagcggaaagcggaggaagggagt
ggagtgacaggacctcagattaaaacaacaaaacctaagaaaaggaaaatggagcgtgaa
gatgactttgataaactggttaacaaatacaaacagaatatgttgactaaatcagtcaaa
tccaagtggtttgatcagtga
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