Crassostrea virginica (eastern oyster): 111102844
Help
Entry
111102844 CDS
T09197
Name
(RefSeq) toll-like receptor 6
KO
K10169
toll-like receptor 6
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04145
Phagocytosis
cvn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
111102844
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111102844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111102844
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111102844
04090 CD molecules [BR:
cvn04090
]
111102844
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Phagocytosis
Toll-like receptors
111102844
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111102844
CD molecules [BR:
cvn04090
]
Proteins
111102844
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
111102844
NCBI-ProteinID:
XP_022291463
UniProt:
A0A8B8ALI2
LinkDB
All DBs
Position
7
Genome browser
AA seq
724 aa
AA seq
DB search
MLLIWVTKISDLYMFQVLNDTIMLFIWIFVTGYLHLANGDNCRWTHTNTDVMVDCSGKGL
TSIPRLNHSVTYLDISRNDIKALTGSSFESLTELRFLDISHCKLRDVDKGVFGELYNLQY
LNISFNRELGFASLPNITYNLNQTKIASLDLNGINCATGIGTIIKRHHLRNIQMTSLKKL
SLASNRLELLETGVISAWPKTLQILTLAENKLTAGAYALEVHSLSNLTVLNMSYQLHPPK
YPLSAYDICSEKVEMEIESNTFTSNFSYKEFNFNWSMPFPENLEILYAQSSRLFIKDPKV
SIHAPSLKHVFLQDNFFLSLGEPISAKHNRIESLDISNNFCSHFSRKNNFTADHLKLLNF
SHNDLSRDLEEDKEGEIFKTFIGLEVLDISFNKISSLPRLLLKNSSNLMYINASNNRMST
WMVDISHMYNLIYLDLSENKFASLSINARFQIEMAFQHSINMTVDLSGNVFTCTCENKEF
LNWIQKNKGRFRNVEHYTCNTEEMVFDFKFLDVSLNNLRKKCTSYLGWYIVCAAGIAIFF
SCMIAAILVKNKWKIRYMIYKTKQRFRLTAKCRHTSTSLQYEYDAFISYSGHELMFVLKE
FIPRLEVNKNLKLLIKDRDALPGIPKVDNIMSSLQESRRTICIVSKKYLESKWRDYELNM
AKVEGIKDRGTLDYVILVLLPEVYNGGYPHKIIDLVRKDCYIEYPMESCAYDDFWDRLTR
MIED
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctgttaatctgggtgacaaaaatctctgatttatatatgtttcaagtactaaacgac
accatcatgctattcatttggatatttgtgactggatacctccatttggccaacggtgat
aactgtcgatggacacatactaacacggatgtgatggtggactgttctggcaagggatta
acgtcgataccacgtttgaaccattcggtcacttaccttgatatttcgcggaatgacatc
aaagctctgactggatcgtcttttgaatccttgacggagttacgtttccttgacatatcg
cattgtaaattacgtgacgtagacaaaggcgtgtttggtgagttgtacaacctacaatat
ttaaacatatcctttaacagagaactgggatttgcatcgttgcctaatataacatataat
ctaaaccagactaaaatagcatcactggatttaaatggaatcaactgtgccacaggaatt
ggaaccattataaagcgtcaccatctgaggaacattcaaatgaccagcttgaaaaaactc
tccctagcaagtaatagactcgaactacttgaaactggtgttatttcagcctggccaaaa
acattgcaaatactaacattagctgaaaacaaattaacagctggtgcatatgctctagag
gttcattcattgtctaatttgacagtattgaacatgagttatcaacttcatccacctaag
tatcctctatctgcttatgacatatgttctgaaaaagttgaaatggaaatcgaaagcaat
actttcacaagcaacttctcatataaggaattcaatttcaactggagcatgccgtttcca
gaaaatcttgaaattctgtacgcacagtctagcagactttttatcaaagatccgaaggtt
tcaatccatgctcctagtctaaaacacgtgtttttacaggataatttctttttgtcttta
ggggaacctatttcggccaaacacaatcgtattgaatcacttgacatatccaacaatttc
tgttcccatttttccagaaagaataatttcaccgcagaccatctaaaactcttgaatttt
tcacataatgatcttagtcgagatttggaagaagataaggaaggagaaatctttaaaaca
tttattggattagaagttttggatatatccttcaacaaaatatcttcgctacctagattg
cttttgaagaactcaagcaacttgatgtatatcaacgctagcaataacagaatgtccacc
tggatggttgacattagtcatatgtacaatctcatatatcttgatttgtctgaaaacaaa
tttgcctcactaagcatcaatgctcgctttcaaattgaaatggcttttcaacattctatc
aatatgacagtagatttgtcggggaatgtatttacttgtacatgtgaaaataaagaattt
ttaaattggatccagaaaaacaaaggccgatttcgaaacgtcgaacattatacatgtaat
accgaagaaatggtgtttgattttaaatttctggatgtgtctttaaacaatttgcgaaaa
aagtgtacctcgtatttgggttggtacatagtatgtgcagctgggatagctatattcttc
agttgcatgattgctgctatacttgttaaaaacaaatggaaaatccgatacatgatctac
aaaacaaagcaaaggtttaggttaacagccaaatgcagacatacatcaactagtttgcag
tacgaatatgatgccttcatctcctatagtggacatgaactaatgttcgtattgaaagaa
ttcattcctcgtttagaggtcaacaagaatctaaaactcttgataaaagacagggatgcc
ctcccaggaatacccaaagttgataacataatgagtagtctacaggaaagcagacgcacg
atttgcattgtatccaaaaagtatctggagtccaaatggcgggattacgaactaaacatg
gctaaggtagaaggcatcaaagacagagggaccctggattatgtcattcttgtattgtta
ccagaagtttataatggcggatacccacataaaattattgaccttgttcgaaaagactgc
tacattgagtatccaatggaatcatgtgcctacgacgacttctgggatcggctaactagg
atgatagaagactga
DBGET
integrated database retrieval system