Crassostrea virginica (eastern oyster): 111103096
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Entry
111103096 CDS
T09197
Name
(RefSeq) nuclear pore complex protein Nup160-like isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111103096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111103096
03036 Chromosome and associated proteins [BR:
cvn03036
]
111103096
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111103096
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111103096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
111103096
NCBI-ProteinID:
XP_022291829
UniProt:
A0A8B8ANX2
LinkDB
All DBs
Position
1
Genome browser
AA seq
1401 aa
AA seq
DB search
MAENSRVRYFREVVVPSNSGSKWKEGHINTVASVSTLQDIKVPDSSGGYAFTEGGVSNRF
IYWRTTSNILELVEQSLDYNLFGSQIRFHFHDTQIIGGISIHESHGNVIVLVVTAISVHR
LVFSHPSKLIKNNIGYTQSSQPVPSIFSYASENLWSKYLLNHGGNFSSQIQGAASAQNGE
GQALFALSSNEGSVLLIKMPPLNIQGIVQQFELSKSSMMQKLWTGLVPAAMRGSQESLET
ATGLVIHPFRGDTFVFAICRDHKIRVWSTRTHECVSIYNILETCPELKNAPPAIGSGHKL
VKVMTSDAVNLLLCVHLNFTERNQFCFIQPQLLSGRMQHLHMATVVGVAEDLIDYCVTSD
KLWTLWTNSSGESIARVCHMSGELRDGNWVEVILHPSDGGEVLVSQHTDPREVYTEKIFQ
PKRFNLYDIHKALNVYRRSMDATVPANLDIDMLKQEVTEAVEDAIRNSAMANEVTEEEYC
DLQMEQWSKFYSGVVQYQEVGGKMKGFFADSNTGLVCIIKKGGLSYVRPCDPIEELYLGN
GYWSADHLDEITRRDVKTLGMCLSLIGGKISEEMVVQFEDSLLMKEPPEEAVRLLVEYLF
FNTSLVEVSLDSLGALVQNINDLPSCLQVVLDSLDLTNRAAMEEEESDMESEQQQLMGDQ
MLTSDSALDFLTTTLQQTSETGFQALRDILVFLTSAISLGDRDGITPEISETLNEMIPRT
SSLLQSYATLKWASTKVATPSTSNSLEMNLRQLATLELKENSGLTSMQKTVSSNVTVAEL
FIRGVGGNQARVNLSRTERFHDNTGQICNWAVLGITKQIQLLLWPLNENFLFPEFLASCC
QYLPLQEYSYQLNHWCEINPASRKFMLGLCYLHFGEPEKAAQCYTEAKEGLEMEAFLQSL
LQTDELNPRVLEVLYYLKVIRQFEEFDCADTVVHLARTAISIADQNDENTATLWSKMFKY
QLELGHNDEAYSAMVSNPDPSRRKDCLRQLLVTLCERGDLQTLVGFPYIDLQDEVVSILE
SRARSVDITTQNYYDLLYAFYLSRNNFGKAGSVMYEHGMRLGREVPSRQGLQKQAHCYLA
AMNALRLVNPMYAWIVKPTAGNEMQMMKGMMSGKRKLDGDEKEDLTAAPKKMEILELEDI
EKEFMLVDARLQLLKHDTTNSVGSGPTPGPDEMVGLLVNAGMYDRALTICQLFDMKLTSV
FDSLALRCVNLAKSCSHSTLADTTTLTRAWDWLKLNNLTAPSIKESSAADTAWSLLQHYL
RTHEDNTAQLHRTVVVRLLSQGFPLPSWLIKSYKELNWSELLRLYTAYDQLEDAVLLTIE
YVDALMGTYSGPDCPAFNLKSSLRPSPLNNWLPYTCIDQLSRALKDLKQDMLYDRLAEKL
AHKLTSYHQKMRNISEQMAIR
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaactcaagagtgaggtattttagagaagtcgttgttccctctaattcggga
tctaaatggaaagaagggcacataaatacagttgcatcagtgagcactttgcaagacatc
aaggtccccgacagcagtggaggatatgcatttacagagggtggagtgtccaatagattt
atatactggaggacaactagcaacatattggagctggtggagcagagtttggattataac
ttgtttgggtctcagattcgtttccatttccatgacacccagatcattggcggaatttcc
attcatgaatcccatgggaatgtgatagtgttggttgtcacagccatcagtgtacatcgc
ttggttttctctcacccaagtaaactaatcaaaaacaatattggttatacccagagcagt
caaccagtaccatcaattttcagctatgcatcagagaatctttggagtaaatatctactg
aaccatggtggaaacttctcatcccaaatccagggggcagcatctgcccagaacggggag
ggtcaggcattgtttgccctcagtagtaatgaggggagtgttctcctcatcaaaatgcct
ccccttaatatacaagggattgtgcagcagtttgaactttcaaagtcctccatgatgcag
aagctgtggacaggactggtaccagcagccatgagagggagtcaggaatccctggagact
gccactgggctggtaatccacccattcaggggagacacctttgtctttgctatctgcagg
gaccacaaaatcagagtgtggtctaccaggactcatgagtgtgtttcaatttacaacatc
ttggaaacttgtccagagctgaaaaatgcaccaccagccattggttctggacacaagctg
gttaaggtgatgacaagtgatgctgtcaacttactgttgtgtgtccatttgaatttcaca
gaaagaaatcagttttgcttcatccaacctcaattgctgagtgggcgaatgcagcatctc
cacatggctactgtggtgggcgtggccgaggatttgattgactactgtgtgacctcggac
aagctgtggactctgtggaccaatagttcgggagaaagcattgcccgggtctgccacatg
tcgggagagttgagagatgggaactgggtagaggtaatactgcacccctcagatggcggg
gaggtgttggtcagtcagcacaccgaccccagagaagtctatacggagaaaatttttcaa
cccaagcgattcaacttgtatgacatccacaaagctctcaatgtatatagaagatcaatg
gacgctacagttccggctaacttggacattgatatgctgaagcaggaagtgacagaagcg
gtagaggatgctattcgcaattcggcaatggctaatgaagtaacagaagaggagtattgt
gacctgcagatggagcagtggtccaagttctactcaggggttgtacagtaccaagaggtt
ggtggaaagatgaaaggcttctttgcagattccaacacaggccttgtgtgcataattaaa
aagggaggcctgagttatgtacgaccttgtgaccccattgaggaactgtatctgggcaat
ggatattggtcagctgatcacctagatgaaatcactcggagagatgtaaagactttaggc
atgtgtctgagtttaattggtggaaagatctcggaggaaatggttgtccagttcgaggat
tccctgttaatgaaggagccaccggaggaagcagtgagacttctggtggagtacctgttc
ttcaatacgagcttagtggaagtaagccttgattcactgggggccctagtccagaacatc
aatgatttacccagctgcctacaggtggtgctggactcactggatctcaccaacagggct
gctatggaagaggaggaaagtgatatggagagtgagcaacagcagttgatgggggatcag
atgctgaccagcgactcggccctggatttcctgaccaccaccctccagcagacctcggag
accggcttccaagccctccgggacatcctcgtttttctgacctcagccatcagtctgggc
gacagggatggaatcaccccagagattagcgagactctcaatgaaatgatcccaaggacc
agctcccttcttcagtcctacgccacactgaagtgggcgtcgaccaaagtagccactccc
agcacatctaattcattggaaatgaacttgcgacaattggccactctagaattaaaggaa
aactctggattaacaagtatgcagaaaacagtctcttccaatgtgactgttgctgaactt
ttcattcgaggtgttggtggtaaccaagctcgagtcaaccttagtcgcaccgaacgattc
catgacaacacagggcagatctgtaactgggctgtactgggaataaccaagcagattcag
cttcttctgtggcctctgaatgaaaacttcctgttcccagagttcctggccagctgttgc
caatacctccctctgcaggaatattcatatcaattgaatcattggtgtgaaataaaccca
gcctctaggaaatttatgctggggctttgttatcttcattttggggagcctgagaaagca
gcacagtgttacactgaggctaaagaaggactggagatggaagccttcctacagagtctc
ctccagacagacgaactcaatccacgagtcctcgaggttctgtactacctcaaggttatc
aggcagtttgaggaatttgactgtgctgacacagtggtccatttagccagaacggccatc
agtattgccgaccagaatgacgaaaatactgccactctatggtcaaagatgtttaagtat
cagctggaactgggtcacaacgatgaagcttacagtgcaatggtcagcaatccagaccca
tcgaggaggaaggactgtctgaggcaactgctggtgaccttgtgtgagcgaggtgacctt
cagacattggtcggattcccttacatagatcttcaagatgaggtggtttctatcttggag
tctagagcccgatctgtggatatcaccacacaaaattactacgaccttctgtatgctttc
tatttgtccagaaacaactttgggaaagctggttccgtgatgtacgagcatgggatgcgg
ctagggagggaggtgccctctagacaggggctccagaaacaggcccattgttacctggct
gccatgaatgccctccgactggtcaaccctatgtatgcttggattgtgaagcccacagcg
ggcaatgaaatgcagatgatgaaaggcatgatgtcaggcaagcgtaaacttgatggtgat
gagaaagaagatttgacagcagcaccaaagaaaatggagattttagagttggaggatata
gagaaggaattcatgttagttgatgcccgtcttcaactgttgaagcatgatacaactaac
tcagttggatcaggtcctactcctggccctgatgagatggtggggttgctggtgaatgct
gggatgtacgaccgagcgctaacaatttgtcagttgtttgatatgaagttgacgtctgtt
tttgacagcctggcattaaggtgtgtgaacttggccaaaagttgcagtcactccacactt
gcagacactaccaccttgacccgtgcctgggactggctaaaactgaacaacctgacagcc
cctagcatcaaggagagcagtgctgccgacactgcgtggagtctcctgcagcattacctg
aggacccacgaggacaacaccgcccagcttcaccgcaccgtggtggtccgtctcctctcc
caggggttccccctaccctcctggctaatcaagtcttacaaggaattgaattggtcagaa
ctattaagattatatacagcctatgaccagctggaagatgcagtcctcttgactattgag
tatgtggatgccttaatgggaacttactctggtcccgattgtccagcatttaatctcaag
tcctccttgaggccctcacctttaaacaactggttaccttacacctgcatagatcagctc
tcaagagccctgaaagacctcaaacaagatatgttgtatgacaggctggcagaaaaactg
gcacacaagttgacatcctaccaccaaaagatgaggaacatatcagaacagatggcaata
agatag
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integrated database retrieval system
