Crassostrea virginica (eastern oyster): 111103127
Help
Entry
111103127 CDS
T09197
Name
(RefSeq) toll-like receptor 13 isoform X1
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111103127
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111103127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
111103127
NCBI-ProteinID:
XP_022291873
EnsemblRapid:
LOC111103127
UniProt:
A0A8B8AML2
LinkDB
All DBs
Position
7:33473..38249
Genome browser
AA seq
908 aa
AA seq
DB search
MKVITRTMEPSLVFLLAITCYAMIQPISMLTTLNFCGEKMCICDKGTKMAFCKPALKNTS
LSYFPRLPSYITNLTFKNFFRPTITKEDLVNLTHLSLRYLHLELMNIRQIDKGLFQLFPS
LQNLSISNNENLSSVTLRDAFQNISTILMELDLTSNNLRNIEFDMFKYLSHTKLTTLILK
GNPLINLRAETVENLNLTKLDLSFSRFDDLKSICPTQSFLPLSNLRDLHLQSTIISRNLN
SIFICFPNLTKLHLENNNLNNFPSFCDTQELSILQETRSNLEELYLTNTSIKGNISSNAF
RCIGELIYLDLNKNQINDVPDFCYPNGQSSVSKLKQLSLEYTSISILRKDSFKCLSSLQI
LNIKNNVLKNPTNFCSKDNTSYTPNLTSLFLRNTSITSFTGYEFHCLRKLRKLDLRLNYF
KYIPSFCDKSNQSINPSLINLDLSWNSIQYIFPTTFRCLSSLKTLVIGHIPISILENNIF
RPLTSLKYLEIENLSKLRKIQKHAFNISSLDYLKFTFNNFHFEDLTRYSPEHLFESCKNV
KTLILSGNYFSTGSVAQIILKPLKHLTKLALDRNRMHAIHRDTFKSSITLQILRLNYNML
TGWDENVFKYLSNLSDLNLAQNRIAIFNKTSVPMDILNNLETFDLAYNPFNCSCDMIWFR
KWSMKTNVTLVLFPHLYRCQSPPNMVRQTLLSFNLTDEDCKVKNPWLIVILTACAGTLFV
FCFSLTISMQMPTIKNYIYYLRLRKMGYVKLINDQDFSYDAFVVYCESDENWVIHTLVAK
LEIEGFRLCIPDREFDVGAVRCDQIVSAFNESKKILVVLSNNFAKNEWCLWQMNLVEERL
RKSGNSATVFVLYKSISSKNMISSLHRVLKERPILTWFKGGTREKMFWNVVCLAVGAPLG
EPPISVIQ
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttataacaagaacgatggagcctagtttggtttttctgttggcaataacttgt
tacgcaatgattcaaccgatttccatgttaactacattgaatttttgtggagaaaaaatg
tgcatttgtgataaaggaaccaaaatggccttttgtaaaccggcactaaagaacacttcg
ctgtcgtattttcctagactaccaagctatataaccaatttaactttcaaaaactttttt
cgtccgaccatcactaaagaagatctggtgaatttgactcatctttcccttcgatattta
catctggaactaatgaatattaggcagatagataaagggctttttcagctgtttcctagt
ctacagaatttgtccatatccaacaacgaaaatctttcctctgtgactttaagggatgcg
tttcaaaacatctctacaatcttaatggaattagatctgacttcaaacaacttgaggaat
attgaatttgacatgttcaaatatctttcccatacaaaacttactactttaattttgaaa
gggaatccattgataaacttacgggctgagacggttgaaaatctaaatttaacaaaatta
gatttatcattctctaggtttgatgatttaaaatcaatctgtccaacacagtcctttctc
ccactatcaaatcttagagaccttcatcttcaaagtactattattagtagaaatttaaat
tcaatcttcatatgttttccaaatcttacaaaattacatcttgagaacaacaacttaaat
aattttccatcattttgtgacactcaagagttatccatacttcaggaaaccagaagcaac
ttagaggaattgtatctcacaaatactagcataaaaggaaacatctctagcaatgctttt
cgttgtataggtgaacttatttatcttgatcttaacaaaaatcaaatcaatgacgttccc
gatttctgctatccaaacgggcaaagcagtgtttcaaaacttaaacagctaagtttagaa
tacacatcgatctccattctcaggaaagattcttttaaatgtttatcttctcttcaaatt
ctgaatataaagaacaatgtgttaaagaatcccacaaacttttgtagcaaagataacaca
agttacacaccaaatttaacatctctcttcttgcgcaacacaagcattacaagttttact
ggttatgagtttcactgccttcgaaaattaagaaaactagatttgcgtttaaactatttc
aaatatattccttccttttgtgataaatcaaatcagagtattaatccatctcttatcaat
ctggatttgtcttggaacagcattcaatatattttccctaccacattccgttgtttatcc
tccttaaagacactggttatcgggcacatacctatatcaatacttgaaaacaacatattt
cggccattaacatctttgaaatatctggaaattgaaaacctgagtaaactacgaaaaatt
caaaagcatgcctttaatatttcaagtctggattacttgaaatttactttcaacaatttt
cattttgaggatttaactagatattctcctgagcatctattcgaatcctgtaaaaatgtc
aagacattgatacttagtggaaactatttttcaacgggttccgtcgctcaaataattctt
aaacctttgaaacacctcaccaagctggcccttgataggaacagaatgcatgctattcac
agagacactttcaaatcgtctataacattacaaatactccgtttgaattacaacatgctt
actggttgggatgaaaacgtattcaaatatctttctaatctatctgacttgaatcttgct
caaaacagaatagccattttcaataaaacatcagtgccgatggatattttaaataacctg
gaaacatttgatctggcgtataacccctttaattgcagttgtgatatgatttggttcagg
aaatggagtatgaaaacaaatgtaactctagtgttgtttccgcacctatatcgatgtcag
agcccacctaatatggttcgacaaacattattaagctttaatctcaccgatgaagattgc
aaagtgaaaaacccatggcttattgtaatattaaccgcgtgtgcaggaacactgttcgta
ttttgtttttctttaacaatatcaatgcaaatgcctacgataaaaaattacatatactac
ttacgtttgagaaaaatggggtatgtcaaactcatcaatgaccaagatttctcttatgat
gcatttgttgtatactgtgagtcagacgagaattgggttatacatactcttgtggcaaaa
ttagaaatagaaggatttcgactgtgtattccggacagagaatttgacgtgggtgccgta
agatgtgatcaaattgtatctgcattcaatgaaagcaagaaaatcttggtcgttttgtcc
aacaacttcgcaaaaaatgaatggtgtctttggcaaatgaatctagttgaagaaagactt
cgtaagagtggaaattctgcaacagtatttgtattgtacaaaagcataagtagcaaaaac
atgatttcttctttacaccgcgtactgaaagagaggcccattctgacttggtttaaaggt
ggtactcgtgagaaaatgttttggaacgtggtgtgtctggccgtgggggcgccattaggt
gaacctcctatttccgtgatacaatga
DBGET
integrated database retrieval system