Crassostrea virginica (eastern oyster): 111103195
Help
Entry
111103195 CDS
T09197
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111103195
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111103195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_At5g56370
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
111103195
NCBI-ProteinID:
XP_022291977
UniProt:
A0A8B8AKA4
LinkDB
All DBs
Position
7:complement(2506971..2509282)
Genome browser
AA seq
760 aa
AA seq
DB search
MELDLTSNNLRNIEFDMFKYLSHTKLTTLILKGNPLINLRAETVENLNLTKLDLSFSRFD
DLKSICPTQSFLPLSNLRDLHLQSTIISRNLNSIFICFPNLTKLHLENNNLNNFPSFCDT
QELSILQETRSNLEELYLTNTSIKGNISSNAFRCIGELIYLDLNKNQINDVPDFCYPNGQ
SSVSKLKQLSLEYTSISILRKDSFKCLSSLQILNIKNNVLKNPPNFCSKDNTSYTPNLTS
LFLRNTSITSFTGYEFHCLRKLRKLDLRLNYFKYIPSFCDKSNQSINPSLINLDLSWNSI
QYIFPTTFRCLSSLKTLVIGHIPISILENNIFRPLTSLKYLEIENLSKLRKIQKHAFNIS
SLDYLKFTFNNFHFEDLTRYSPEHLFESCKNVKTLILSGNYFSTGSVAQIILKPLKHLTK
LALDRNRMHAIHRDTFKSSITLQILRLNYNMLTGWDENVFKYLSNLSDLNLAQNRIAIFN
QTSVPMDILNNLETFDLAYNPFNCSCDMIWFRKWSMKTNVTLVLFPHLYRCQSPPNMVRQ
TVLSFNLTDEDCKVKNPWLIVILTACAGTLFVFCFSLTISMQMPTIKNYIYYLRLRKMGY
VKLINDQDFSYDAFVVYCESDENWVIHTLVAKLEIEGFRLCIPDREFDVGAVRCDQIVSA
FNESKKILVVLSNNFAKNEWCLWQMNLVEERLRKSGNSATVFVLYKSISSKNMISSLHRV
LKERPILTWFKGGTREKMFWNVVCLAVGAPLGEPPISVIQ
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaattagatctgacttcaaacaacttgaggaatattgaatttgacatgttcaaatat
ctttcccatacaaaacttactactttaattttgaaagggaatccattgataaacttacgg
gctgagacggttgaaaatctaaatttaacaaaattagatttatcattctctaggtttgat
gatttaaaatcaatctgtccaacacagtcctttctcccactatcaaatcttagagacctt
catcttcaaagtactattattagtagaaatttaaattcaatcttcatatgttttccaaat
cttacaaaattacatcttgagaacaacaacttaaataattttccatcattttgtgacacg
caagagttatccatacttcaggaaaccagaagcaacttagaggaattgtatctcacaaat
actagcataaaaggaaacatctctagcaatgcttttcgttgtataggtgaacttatttat
cttgatcttaacaaaaatcaaatcaatgacgttcccgatttctgctatccaaacgggcaa
agcagtgtttcaaaacttaaacagctaagtttagaatacacatcgatctccattctcagg
aaagattcttttaaatgtttatcttctcttcaaattctgaatataaagaacaatgtgtta
aagaatcccccaaacttttgtagcaaagataacacaagttacacaccaaatttaacatct
ctcttcttgcgcaacacaagcattacaagttttactggttatgagtttcactgccttcga
aaattaagaaaactagatttgcgtttaaactatttcaaatatattccttccttttgtgat
aaatcaaatcagagtattaatccatctcttatcaatctggatttgtcttggaacagcatt
caatatattttccctaccacattccgctgtttatcctccttaaagacactggttatcggg
cacatacctatatcaatacttgaaaacaacatatttcggccattaacatctttgaaatat
ctggaaattgaaaacctgagtaaactacgaaaaattcaaaagcatgcctttaatatttca
agtctggattacttgaaatttactttcaacaattttcattttgaggatttaactagatat
tctcctgagcatctattcgaatcctgtaaaaatgtcaagacattgatacttagtggaaac
tatttttcaacgggttccgtcgctcaaataattcttaaacctttgaaacacctcaccaag
ctggcccttgataggaacagaatgcatgctattcacagagacactttcaaatcgtctata
acattacaaatactccgtttgaattacaacatgcttactggttgggatgaaaacgtattc
aaatatctttctaatctatctgacttgaatcttgctcaaaacagaatagccattttcaat
caaacatcagtgccgatggatattttaaataacctggaaacatttgatctggcgtataac
ccctttaattgcagttgtgatatgatttggttcaggaaatggagtatgaaaacaaatgta
actctagtgttgtttccgcacctatatcgatgtcagagcccacctaatatggttcgacaa
acagtattaagctttaatctcaccgatgaagattgcaaagtgaaaaacccatggcttatt
gtaatattaaccgcgtgtgcaggaacactgtttgtattttgtttttctttaacaatatca
atgcaaatgcctacgataaaaaattacatatactacttacgtttgagaaaaatggggtat
gtcaaactcatcaatgaccaagatttctcttatgatgcatttgttgtatactgtgagtca
gacgagaattgggttatacatactcttgtggcaaaattagaaatagaaggatttcgactg
tgtattccggacagagaatttgacgtgggtgccgtaagatgtgatcaaattgtatctgca
ttcaatgaaagcaagaaaatcttagtcgttttgtccaacaacttcgcaaaaaacgaatgg
tgtctttggcaaatgaatctagttgaagaaagacttcgtaagagtggaaattctgcaaca
gtatttgtattgtacaaaagcataagtagcaaaaacatgatttcttcattacaccgcgta
ctgaaagagaggcccattctgacttggtttaaaggtggtactcgtgagaaaatgttttgg
aacgtggtgtgtctggccgtgggggcgccattaggtgaacctcctatttccgtgatacaa
tga
DBGET
integrated database retrieval system