Crassostrea virginica (eastern oyster): 111103325
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Entry
111103325 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor, arginine/serine-rich 15-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111103325
03041 Spliceosome [BR:
cvn03041
]
111103325
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111103325
Spliceosome [BR:
cvn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
111103325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111103325
NCBI-ProteinID:
XP_022292217
UniProt:
A0A8B8AKY9
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Position
7:complement(33759938..33768367)
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AA seq
1248 aa
AA seq
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MEAVRAFNNELSSLYETRPPISRAKMANVTKCAIKAIKFYKHVVQSVEKFILKCKPEYKV
PGXYVIDSIVRQSRHQFGQDKDVFAPRFTKNIVATFENLFKCPAEERSKVVRVLNLWQKN
GVFMSEVIQPLLDMASDPNNKQHSIAAQRAVDNVLHQXSKPHQAEGGQDTSMNTSFQPDD
GEENAENSLAAQTEMLNTVTQLLQQNAQGSTSLCAQQQQLQQLQLLQQQLIQHTQLMQQS
NQGTPVIDNTLLSSIQTLTNQLLKSGDKPAEPGFNRKLLDFDYGESDDEDAGHGQPQPNV
LNETHMMQQIQQLSQTIQKNENXEQTKILQQQQAEFDQQIGHMGGMPHQMHMQHEPLHHQ
MGHPMPPGYGHVMPPDPSQQIFPPQDIDERPHLPPVPPEEEDEQRDRRDRDREDRRHRRS
RHERSRSRTPKKRRRSRSRSRERRRRSRSRDRHRRSRSRDRERDRQREKERERRKKGLPA
MRDQCLSICSTTLFIGKISKTTSEDELRAELEKYGSIESINMIPPRGCAFVCMTRRKEAX
KAVDRMKGQLLNGSELRVAWAPGIGVKESAFKDKWEVDVGATYIPWSSLPDDLSGLTEGG
IIDEDSLPENLKGITVGREKPDAQDEPPMPLMNNQLPPTQVQPLQPVNMPPGGPPPGTMP
PPIPPTGVMPQGMLPRMGMMPQMMVQGGMPPPQISGMPPVVPSAPMTMSTGIPPVPGQAG
MIPLPAGMPPGGMPQVVRQPASVVSTGVTFTQNMTMGTPMLAVQRPGLPPGAAFQRFPMP
PQGLFRPPQPSFDPMKPAMPGPNRPPFDGLQESKEKPPLPGQEWQQKTEFDTSENMDLDV
RDSKPEKKSRFSDATPPDSFSQGGLKXGKXMGMLGQMRPQMGPGMSPSGGMRGPRPLMDA
GGPNMGPRGPPDGQRFNSPNMMGVPQRGGFGGPGGPPGFRGNRPFQRFPGQFMRPGFRGP
PGDMMRPPFEGPGADEGMEMDNPPDEHESDHKRRNSGDRWRDDRDDEGGDYXDYRRDDWR
GGRGRGXGRDFGGRGGRRDFDRRDRNRDDRGGRDRDYDRGDRRNRDREDRYRDRNEGFRD
RGRAREDRGDRGDHEEREDWRPRTDEERSGSRKEALGWGSALEEMMKTVVIPPPGGKPEE
SKEDIGPAEPEIAPVCPAGVPPPPEQEEPVXGADNSAEVEPAAPALPEIPVAPVPPVSDS
VNXNGPEVTCDSVPNGEEGHVPSPLPEPETVTEKKEKVPGDLEEGEIE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtaagagcattcaacaatgagctgtcctcattgtatgagacaaggccacct
atttcgagagccaagatggccaatgttaccaagtgtgcaataaaggcaatcaagttctac
aaacatgtggttcaaagtgttgagaaattcattctgaagtgcaaaccggaatataaagtg
ccaggcntttatgtcattgattcaattgtcagacagtcaagacatcagtttggccaagat
aaagatgtgtttgcaccaagatttaccaaaaacattgttgcaacatttgagaatctgttc
aaatgccctgcagaggagagaagcaaggttgtgagggtcttgaatctttggcagaagaat
ggagtgtttatgagtgaagttattcagcctttactggacatggcgtctgatccaaataac
aagcaacattcaatagccgctcaaagagcagttgacaatgtattgcatcagnngagcaag
ccccaccaagcagaggggggccaagacacctccatgaacacctctttccagcccgatgac
ggagaggaaaatgcagagaactccctggctgctcagacagagatgttaaacaccgtaact
cagctgctacagcagaatgcacagggttccaccagtctttgtgcacaacaacagcaatta
cagcagctacaacttcttcagcaacagctgatacaacacacacagctgatgcagcagtcg
aaccaaggaacacctgtcattgataacaccctgttgtcttccatccagacactgaccaac
caacttctaaagtccggggacaaacctgcagagccaggcttcaacaggaaacttctagat
tttgattatggagaaagtgatgatgaagatgcaggccatgggcaaccccagccaaatgta
ttaaatgaaacccatatgatgcaacaaattcagcagctttcccagacaatccaaaagaat
gagaacnntgaacagacaaaaatcctgcagcaacagcaagcagaatttgatcagcagatt
ggacatatgggaggtatgccccaccagatgcatatgcagcatgaacccctccatcatcag
atgggacatcctatgcctccgggatacggccatgtcatgcctcctgacccctcccagcag
atttttcctccccaggatattgatgaacgaccccatctccctccagtacccccagaggag
gaggatgagcagagagatcgtagggacagagatcgggaggatagaagacataggaggtca
aggcatgagagatctaggtcaagaactccaaagaaaaggaggagatctagatcaagatca
agggagcgtcgtcgaaggtcaaggtcaagagacaggcacaggcgatcaaggtccagggat
agagaaagggacagacaaagagagaaagaaagagaaaggaggaaaaagggtttgccagca
atgagagaccagtgtctatctatatgttcaacaactttgttcattggaaagatctccaaa
actacatctgaggatgaattaagggcagaactagaaaaatatggaagcattgagtcaata
aatatgatcccacctcgtggatgtgcttttgtttgtatgacccgcaggaaagaagctncc
aaagcagtggacagaatgaagggacagctgttgaatggcagtgaactcagggttgcctgg
gcacctggcattggagtgaaggagtcggcatttaaagacaagtgggaggttgatgttggg
gccacttacatcccctggagctcccttccagacgatctctcgggactgaccgaggggggc
attattgatgaagactctttgccagaaaatctgaaagggataacagttgggagagagaaa
cctgatgctcaggatgaaccacccatgccactaatgaacaatcagctacccccaactcag
gtgcaacccctgcagcctgtcaacatgccccctggagggcccccgcccggaaccatgcca
cccccaatacctccaacaggagtgatgccccaaggaatgttgcctcggatgggcatgatg
ccccagatgatggttcaggggggcatgcctccaccccagatctcaggaatgccccctgtt
gttccatcagctccaatgacaatgagcacagggatacccccagttccaggccaagcggga
atgatcccacttccggcagggatgcccccaggaggaatgcctcaagtggtacgacagcca
gcatcagtagtcagcactggtgtaacatttacccagaacatgacaatgggaacacccatg
ttggcagtgcagcgtccaggactccctccaggggcagcatttcagaggttccctatgccc
cctcagggattatttcgccctcctcagccaagctttgaccctatgaagcctgctatgcct
ggaccaaaccgtcctccatttgatggattacaggaatccaaagaaaaaccaccattgcct
ggacaagaatggcagcaaaaaactgaatttgacactagtgaaaatatggacttggatgtg
cgcgattcaaaaccagagaaaaaatcaaggtttagtgatgccacccctcctgatagtttc
agtcagggaggcctcaaatagggcaagnngatgggaatgcttggacagatgaggccccaa
atgggaccagggatgagtccttctggaggaatgagaggacctagacctctcatggatgca
gggggacctaatatgggccccagaggacctcctgatggacaaagattcaactctcccaac
atgatgggagtcccacagagagggggatttgggggccctggaggtccaccagggttcaga
ggcaacagaccattccaaagatttcctggacaattcatgaggcctggatttaggggtcct
ccaggagacatgatgagacctccatttgaaggtccaggagctgatgagggaatggagatg
gacaatcctcctgatgaacatgaaagtgatcacaaacgtagaaattctggggatcgctgg
agagacgaccgagatgatgagggcggggattacncggactacaggagggacgactggaga
gggggccgagggagagggnaggggcgcgactttgggggaagaggaggcaggcgggatttt
gaccgacgtgaccgaaaccgtgacgacagaggtggaagggacagagattatgatagagga
gacaggaggaatcgagatcgagaggataggtacagagaccggaatgaaggttttagagac
cggggcagggctcgagaggatcgaggagaccgaggggatcatgaggagcgggaggactgg
cgtccaaggacagatgaggagcgctcaggaagcaggaaggaggctttaggatggggcagt
gccttggaagaaatgatgaagactgtggttattcctccaccaggtggaaaaccagaggaa
agtaaagaggacataggccctgcagagccggagatcgctcctgtgtgtcctgctggtgtt
ccccctcccccagaacaggaggaaccagtgngtggggcagataacagcgcagaggtggag
ccggcagcaccagcattacctgagatacctgtagcacctgtcccacctgtcagtgacagt
gtaaacnttaacggaccagaagtgacttgtgatagtgttcccaacggagaggaaggtcac
gtgccttctcctctaccagaacctgaaacagtgacagagaaaaaggaaaaggtcccaggc
gatttagaggagggagaaattgagtga
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