Crassostrea virginica (eastern oyster): 111103820
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Entry
111103820 CDS
T09197
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111103820
Cilium and associated proteins [BR:
cvn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
111103820
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_6
TPR_19
TPR_16
TPR_14
TPR_7
TPR_11
ANAPC3
TPR_9
ARM_TT21_5th
ARM_TT21_N
TPR_CcmH_CycH
TPR_10
ARM_TT21_4th
TPR_17
TPR_Slam
DUF2225
HAT_PRP39_C
HEAT_Nup120
ARM_TT21_C
TPR-S
ARM_TT21_2nd
TPR_15
TPR_21
Coatomer_E
RPN7
TPR_4
NatA_aux_su
RhlB
YfiO
Motif
Other DBs
NCBI-GeneID:
111103820
NCBI-ProteinID:
XP_022293044
UniProt:
A0A8B8AS64
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All DBs
Position
7:45769834..45778461
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AA seq
589 aa
AA seq
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MGNIYFRQRNYPKAIKFYRMALDQVPNSHKEMRTKIMQNIGIVFVKMGQYNDAITSFEHI
MQEAPTFKTGFNLMLCYFALGDREKMKRGFQKLLTVDLRIDDEDKYLPHGEDKNYNLILE
VIKNDSLRQIERKKKYDAENCIKTAAKIISPAIEAQFSVGYDWCTEQVKSSQYLDLAHDL
EIDKAIMFLKQKDFNQAIETLKSFEKKDTKVASTAATNLSFLYFLHGEESDLEQADKYAE
LAMSADRYNPAALVNKGNVLYARGDYEKAREFFKEALQNDSSCVEGLYNLGLTNKKISRL
EDALDCFYKLHAILRNSPQVMYQIADLHDQLEDTAQATEWFMQLIGVAPTDTSVLARTGE
IYDSEGDKSQAFQYYYDSYRYFPSNIPVIEWLGAYYIDSQFCEKAIHYFERAAIVQPAQV
KWQLMIASCYRRSGNYQQALETYKKIHKRFPDNIECLRYLMRICTDLGLPEAQEYATKLK
KAEKTKELREQRATSGTRRGSGRGRRGGDEEREGSGGGRRGKSKGRRPHLDDIGDEPYQV
RQQEVVEDQDANYSDPLGPQMERPKTAAARKQDNDDLFDEDVGDDLLPE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacatctacttcagacagagaaattatccaaaggccatcaaattctacagaatg
gctctggatcaagtgcccaactcccacaaagaaatgagaacaaagatcatgcagaacatt
gggattgtgtttgtgaagatgggtcagtataatgatgccattacttcctttgagcacatc
atgcaggaagcacccactttcaagacaggcttcaacctcatgctctgctactttgctctc
ggagatcgcgagaagatgaagcgaggatttcagaaactcctgacggtggatctcagaatt
gacgatgaggataaatatcttcctcacggggaggacaagaactataatttgattcttgag
gtcataaaaaatgactccctcagacaaatagaaaggaaaaagaaatatgatgctgagaat
tgcataaagacagcagccaagattatctcccctgccattgaggcccagttttcagtagga
tatgactggtgtacggagcaggtgaaatcctcgcagtacctggatttggctcacgacctg
gaaattgacaaggctataatgttcctgaaacagaaggatttcaatcaggctattgaaacc
ctgaaatcatttgagaagaaggataccaaagttgccagcacggcagccaccaacctctcc
ttcctctacttcctgcatggagaggagagtgatttggaacaagctgacaagtatgctgag
ctggccatgagtgccgacagatacaaccctgcagctctagtgaataaaggcaatgtatta
tatgcacgaggtgactatgaaaaagccagagaattcttcaaagaagcacttcaaaatgat
tcatcatgtgtggaaggtttatacaatctaggtttaactaacaagaaaataagccggtta
gaagatgccctggattgtttctacaaactgcatgctattctacgtaacagtccccaggtc
atgtaccaaatagctgacctccacgaccagctagaggacactgcccaagccacagaatgg
ttcatgcagctgataggagtggctcccactgacacctcagtgctggcccggaccggtgaa
atctacgacagcgagggcgacaaatcacaggcattccagtactattatgattcctaccgt
tactttccctccaatattccagtcatcgaatggctaggagcatattatatcgactcccaa
ttctgtgaaaaagctatccactacttcgagcgggcagccattgttcagccggcccaggtg
aagtggcagctgatgatcgccagctgttatcggaggagcgggaactaccagcaggctctg
gagacctataaaaagatccacaagaggttcccagataacatcgagtgtttacggtatctg
atgaggatctgtacagaccttggtttacctgaagcccaggagtatgccaccaaattaaag
aaagccgagaaaaccaaggaacttcgcgaacagagggcaactagtgggactcgcagagga
agtggacgtggtcgacggggaggagacgaagagagagaagggagcgggggaggaaggcga
gggaagtccaaggggcgacgcccacatctggacgacattggagacgaaccgtaccaggtc
cggcaacaggaagtggtggaggatcaagatgcaaactattcagatcccctgggtcctcag
atggagagacccaaaaccgcagcagccagaaaacaggataacgatgatttgttcgatgaa
gatgtaggggacgaccttctaccggagtga
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