Crassostrea virginica (eastern oyster): 111104237
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Entry
111104237 CDS
T09197
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111104237
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111104237
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GFIT
Motif
Pfam:
LRR_4
LRR_8
TIR_2
TIR
LRR_14
LRR_1
LRR_6
LRR_Zer-1
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
111104237
NCBI-ProteinID:
XP_022293787
UniProt:
A0A8B8AQM8
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Position
7:38798795..38802017
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AA seq
585 aa
AA seq
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MVIWNILLITVGIVDVAYSVSSNCSWTKQNKEVKVNCSGRDLRWVPKLNDSVTYLDLSHN
SINIVLFDSTLKNLQFLDISWNHIRHIEISSFSSLTKLRFLDLSHCDIRDVDEAIFGGLN
SLRYLNISYNRELGFVSLPNITYGLDNTKILSLNLNAINCATGMGTIINIRHLRNIRNTN
LTELFLTNNRIELFQQGVISTLPKTIEVFSIAENKLSNGPYFLEIHSMSNLRVFNMSFQR
HFAGMSFLSTVVSFCQEKVDSHVQNRDQNVDSYVQNHDPKTDNKKLNYNISITLPPNLEF
LDLQSNRGYANTVNFTFHAAKLKHAYLQNNFVVSFGNIEAKNNIIETLDVSNNYCHRALR
PEDGQHLKHYNLSFNDLGQDLEQDTEGWYIGGAAFLAILSSVILGVILVRNKWKIRYLIY
KGKQRLRFNVTSYNQVPTSAHYDYDAFISYSGRELMFVLKEVIPRLEVNCNRTLLIRDRD
YLPGIPKVDSIMSSLQESKRTICIVSKKYLESKWRDYELNMARVEGIKDRGTLDYVILIL
LPEVYSSGYPCKIMDLVRKDRYIEYPKESCAFDDFWDRLNRMIED
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggttatttggaacatattattgatcacggtaggaattgttgatgttgcttattcagtt
tctagtaattgtagctggacaaaacaaaataaggaagtgaaggttaattgttctggccgc
gatcttcgatgggttccaaaattaaacgattccgtcacgtacttagacttgagtcacaat
agtattaacatcgttttgtttgactccacgttgaaaaatttgcaatttttggatatttcc
tggaatcatattaggcatattgaaatttcctcgttttcctctttaacgaagctacgtttt
cttgatttatcacactgcgatattcgtgacgtagatgaagccatattcggtggtttgaat
tcactacgttaccttaacatttcatacaacagggaactaggatttgtgtctctacctaat
atcacatatggcttggacaatacaaagattttgtcgttgaatttaaatgcaatcaactgt
gcaacaggaatgggtactataattaatattcgtcatctgcgaaacataaggaataccaat
ttaaccgaattgtttcttacaaacaataggatagaactatttcaacaaggagtgatttct
actttgcctaaaacaattgaagttttttcaatagccgaaaacaagttaagcaatggccca
tacttcctggagatccattcaatgtccaacctaagagtatttaacatgagcttccagaga
cactttgctgggatgtcatttctgagcactgtcgttagtttttgtcaggaaaaagtcgat
agccatgtccaaaatcgtgaccaaaacgtagatagctatgttcaaaatcatgacccaaaa
acagataataagaaattgaattataatatcagtatcactcttcctccaaatttagaattc
cttgacttgcaatcaaacagaggttacgcaaatactgtcaacttcacatttcatgcagcc
aagctaaagcacgcgtatctacagaacaattttgtagtgtccttcggaaatatagaagct
aaaaacaacattattgaaacactagatgtttccaataattactgtcatcgagccctgcga
ccagaagatggacagcatctgaaacactataacctgtcctttaatgaccttggtcaggac
ttggaacaagatacagaaggatggtacatagggggtgctgcctttctagctatattgagc
agtgttatactaggagtaattcttgttagaaacaaatggaaaatccgatatcttatttac
aaaggtaaacagagactccgattcaatgtaacttcttacaaccaggtaccaaccagtgct
cattacgactatgacgcttttatatcttatagtggacgtgaattgatgtttgtattaaaa
gaagttattcctcggttggaggttaattgcaatcgtacgcttctaatacgagaccgtgat
tacttgccggggatccccaaggttgacagcatcatgagtagtctacaggaaagcaaacgc
acaatttgcattgtatccaagaagtatctggagtccaaatggcgagattacgaactgaat
atggccagggtagaaggtatcaaagacagagggaccctggattacgtcattcttatactg
ttaccggaagtgtacagcagtggatatccgtgtaaaataatggatcttgttcgaaaagac
cgctatattgaatatccaaaggagtcgtgtgcattcgatgatttttgggaccggcttaat
agaatgattgaggactaa
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