Crassostrea virginica (eastern oyster): 111104284
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Entry
111104284 CDS
T09197
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111104284
Enzymes [BR:
cvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111104284
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
111104284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
nSTAND3
YxiG
T2SSE
Motif
Other DBs
NCBI-GeneID:
111104284
NCBI-ProteinID:
XP_022293850
UniProt:
A0A8B8ARQ0
LinkDB
All DBs
Position
7:42559220..42637290
Genome browser
AA seq
2197 aa
AA seq
DB search
MSSIPRLTGALRAFANVSSSSEKSVADQHRELALKRQMMAKKHTDTVSWARLKEVISKEA
DVSKPEVEKALKELSQYAKAIVGSEASLETIESSAAFIFDLLKSVTIIGNKETTRLRQIF
GPFPASAASNACVLVNKIVSWLPENKLDSLSNQDRQEADGEASVQEFGKNLKFIGQVRYH
LSEDEISSSDSEDERRELDLNYRASPRKPIITKKENTNTESFDSSWLQREVTKYFPGEET
YLGMSKEDLCSTIFDVLTASNSDEQLQNDLFELLGFDRFELIQSLIQNKKKIIEGALTQP
DGNKKTRAKADGGNRPPVTRPNYGCQVTVQTENERQMMKIIRREEKKDKRRNEEEEEDVG
FLFNPQQLRAQREASLRAQPPMFSGGRGSYAPREKYPFVFDSMEEARQSSAFIGGQKMVL
PNNFNRKSTKLAEEVHIPHTEAQATNVGDERVQISQLDEIAQLAFKNTKALNRIQSVVYN
AAYKTNENLLICAPTGAGKTNIAMLTILHEMKQHISQGVIKKDEFKIVYVAPMKALAAEM
VRNFGGRLEPLGISVKELTGDMQLSKSEIMKTQMLVTTPEKWDVVTRKSTGDVALTQLVK
LLIIDEVHLLHDDRGAVIESLVARTIRQVESSQSMIRILGLSATLPNYIDVARFLHVNPY
VGLYFFDGRFRPVPLGQTFIGIKATSKVQYLLDMNTVCYEKVLDQVKHGYQVMVFVHARN
DTVRTAMVLRDMAKNNGEEQYFAPQQSAQYGQAEKSTLKSRNKQLKELFPDGFGIHHAGM
LRQDRNLVEKYFAAGHIKCLVCTATLAWGVNLPAHAVIIKGTEIYDSKKGSFVDLGILDV
MQIFGRAGRPQFDKFGHGTIITAHEKLSHYLSLMTRQNPIESQYINSLTDNLNAEIALGT
VTNIEEAVKWLSYTYLYVRMRCNPLAYGINYNAIETDPTLEKHRRDLIVDAGRKLDKAQM
VRFDERTGYFASTDLGRIASHFYIKYDTVEVINEHLKQIMTEADVFAVVSKAQEFDQIKV
RDDEMDELDGLLHEICVMQVPGGSENTYGKVNILLQTYISRHNMDAFSLVSDQAYVAQNA
GRIIRALFEVALKKGWPVMAGRLLNLCKTIDKRLWGFENPLRQFPILTSEILNKLEAKKL
TVDRLRDMDPKEIGHMVHHPRMGGVIKKCVNQIPCLDLEASIQPITRTVLRVRLTVQPEF
KWDDKIHGSTAESFWIWVEDPDNNHIYHSEYFLLHKKQVVSGEAQQLVFTIPIFEPLPSQ
YYVRAVSDRWLGAQTSCAISFQHLILPERHPPHTELLDLTPLPKSALDNPSLEALYKFSH
FNPIQTQIFHVLYHTDTNVLLGAPTGSGKTVAAEMAIFRVFREYPKAKAVYIAPLKALVR
ERMEDWKVRIEQKLGKKVVELTGDVTPDMRAVANADLIVTTPEKWDGVSRSWQTRSYVKA
VALLVIDEIHLLGDDRGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDLADWLGIK
QMGLYNFRPSVRPVPLEVHIHGFPGQHYCPRMATMNKPTFQSIKTHSPDKPVLVFVSSRR
QTRLTALDLIAFLAAEDNPKQWLHMGEMEMENIISGIKDTNLKLTLAFGIGLHHAGLIER
DRKVCEELFVNQKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKTRRYVDFPITDVLQM
MGRAGRPQFDDQGVAMILVHDIKKHFYKRFLYEPFPVESNLLEVLPDHMNAEIVAGTVTS
KQDAMDYITWTYFFRRLVQNPTFYNLDGTDFDSINKFLSSLVEKALYELECSYCIEVDDD
QRGVHPMTLGRISSYYYLNHKTMRMFRDELKSECSMAELIEVLSNAEEYAQLPVRHNEDQ
INSQLAQQVPLEVNPHTYDSSHTKTHILLQCHFGQLPLPSSDYNTDTKSVLDQAIRILQA
MLDVSADEGWLVTSLRITQLIQMIVQGRWYHDNALLTLPHMTPFLISCLRPRGEGARQKG
FPDITGPVQTLPEFLALFDGKFDAVMAMLGEDMSRNQVDQLYQVIGNLPQIQVNLQVKGW
WEGGEGQQEARNVNTSHTGGRRPESDWIQVHADQEYVIEVSLKRLNRVKKRDSKAHAPRF
PKPKDEGWFLIVGDIESRDVIALKRVGFVRGSSRQSLALYTPETPGRVIYTLYLMSDSYL
GLDQQYDICLEVIPASIETQVNTEIAAELGDLDFGES
NT seq
6594 nt
NT seq
+upstream
nt +downstream
nt
atgagttccatcccgcgactgactggagctcttagagcctttgccaatgtaagctctagc
tcagagaagtcggtagctgatcaacatcgagaattggcgctgaagcggcaaatgatggcg
aaaaagcatacagatactgtaagctgggccaggctaaaggaagtcatttccaaggaagcc
gatgtatcgaaacctgaagtggagaaagctctcaaggagctctcccagtacgccaaagcc
atagtgggatcagaggccagcctggaaaccattgaaagttcagcggcttttatatttgat
ctcctaaagtcagtcaccatcattgggaataaagagaccacccgactgcgacaaatcttt
ggtccgttccctgcttctgcagccagtaacgcctgtgtattggtcaacaagatagtgtca
tggttaccagaaaacaagctagattccctcagtaaccaggaccgacaggaagcagatggg
gaggccagtgttcaggagtttggcaagaacctcaagttcataggtcaggtgaggtatcac
ctctctgaggatgaaatctcgagctccgactctgaggacgaaagaagagaactggatttg
aactacagagcttcccctcgcaaacccatcatcacaaagaaagaaaacacaaacactgaa
agttttgactcctcctggttacaaagggaggtcaccaagtattttccgggggaggaaacc
tacctggggatgagtaaagaggacttgtgttcaaccatatttgatgtcctgacagcatcc
aactctgatgaacagctgcagaatgatctttttgagcttttaggatttgatagatttgaa
ctgattcaaagtctgattcaaaacaaaaagaagataatagagggagcattaacacagcca
gacggaaacaaaaagacaagagctaaagcagatggagggaacagacccccagttacccga
cctaattatggttgtcaagtcactgtacagacagagaatgagcgtcagatgatgaagata
ataaggagagaggagaagaaggacaagaggaggaatgaggaggaggaagaggatgtgggc
ttcctctttaatcctcagcaactcagggctcagagagaggcctccctaagggcgcagccc
ccgatgttcagtggtgggcggggaagctacgccccacgggagaagtacccatttgtgttc
gactccatggaagaggcgcggcagtcctcggccttcattggaggccagaagatggtgttg
ccaaacaatttcaacagaaaatccacaaagttggcggaggaggtccacattccccatact
gaggctcaggccaccaatgttggggacgagagagtgcagatatcacagctggatgagatt
gcacagcttgcctttaagaataccaaagccctgaatcgtatccagtccgtggtgtataac
gccgcctacaagacaaacgagaacttgttgatctgtgccccaacgggagccgggaaaacc
aacatcgccatgttgaccatcctccacgagatgaagcaacacatctcccagggggtcatc
aaaaaggatgagttcaagatagtttatgtggctcccatgaaagctttggcggctgagatg
gtgcgtaactttgggggtcgcctagaacccctagggatttctgtcaaggaactgacgggg
gacatgcagctgtccaagtctgaaatcatgaagacacagatgctggtgaccactccggag
aaatgggatgtggtgacgaggaagagcaccggggacgtggccttgacccagctggttaag
ttactaattatagacgaggttcatctgctccatgacgaccggggggcagtgatagagagt
ctggtggccaggaccataagacaggtggagagctcccagagcatgatccggatcctgggt
ctgtccgccaccctccctaactacatcgacgtggcccgtttcctccatgtcaacccctat
gtggggctgtacttctttgatggccgattcagaccggtaccactgggacaaacgtttata
ggaataaaagccacaagtaaggtgcagtacctactggacatgaacactgtttgttatgag
aaagtgttggatcaggtgaagcatggctatcaagtgatggtgttcgttcatgctcgaaat
gacacagtcaggacggccatggtgctgagagacatggctaaaaataacggagaggagcag
tatttcgcaccacaacagtcggcccagtacggacaagccgaaaaatctacattgaaatct
cgcaataagcagctaaaggagttgtttccagacgggtttggaatccaccatgcaggcatg
ctcagacaggacaggaacttggttgagaagtattttgcggcaggacacattaagtgtctg
gtctgtacggcgactctagcctggggagtcaacctaccggctcacgccgtcatcatcaag
ggaacagagatctacgactccaagaagggctcctttgtggatctggggatcttggacgtg
atgcagatctttggtcgagcgggtagaccccagtttgacaagtttggccatggtacaatc
atcacagcccacgaaaagctgtcccattacctctccctgatgactcgccagaatcccata
gagagtcagtacatcaacagtctgacagacaacctcaatgccgagattgccctggggact
gtgacgaacattgaggaggctgttaagtggctgagttacacctacctgtacgtcagaatg
aggtgtaatccactggcatacggcatcaactacaatgccatagagactgaccccaccctg
gagaaacaccgccgggatctgatcgtggacgctgggaggaagctggacaaagcccagatg
gtcaggtttgacgagaggacgggatactttgcctccacggacctaggccgcattgctagt
cacttttacatcaaatatgatacagtggaggtgataaatgaacatctgaagcagataatg
acggaggctgatgtgtttgctgtggtgtccaaggctcaggagtttgaccaaatcaaggtc
cgtgacgatgagatggatgaacttgatggcctcctccacgagatctgtgtcatgcaggtt
cccggggggtcggagaacacgtacggcaaggtcaacattctgctgcagacctacatctcc
cgccacaacatggatgccttctccctggtgtctgaccaggcctatgtggcccagaatgct
ggtcgaatcattcgtgctctgtttgaggtcgccctgaagaagggctggccggtgatggct
ggtcgcctgcttaacctgtgtaagacgatcgacaagcggctgtggggattcgagaacccc
ctcaggcagttccctatcctgaccagtgagatcctaaacaaactggaagctaagaagctg
accgtcgatcgactgagagacatggatcccaaggaaataggtcacatggtccaccatcct
aggatgggaggagttataaagaaatgtgtcaatcagattccgtgtctggacctggaggcc
agtattcagccaatcactcgcactgttctcagagtgaggctgaccgtgcagccagagttc
aagtgggacgataagatacatggctctacagcggagtctttctggatctgggtggaggac
cctgacaacaatcacatctaccactccgagtacttcctcctccacaaaaaacaggtagtg
agtggggaggcccagcagctggtgtttaccatccccatatttgagcccctcccctcccag
tactacgtgagggccgtgtctgaccgatggctgggagcccagacctcttgtgcaatatca
tttcagcatctcatcctaccggagagacatcctccccatacagagctcctggatctgacg
cccctccctaagtcggccctggacaaccccagcctggaggccctgtacaaattctctcac
ttcaaccccatacagacccagatcttccatgtcctctaccacacggacaccaacgtcctg
ctgggggctcccacggggtcaggcaaaaccgtggctgctgagatggccatattcagggtg
ttcagagagtaccccaaggcaaaggctgtgtacatagccccattgaaggccctagtgaga
gagagaatggaagattggaaggtcaggatagagcagaaacttggcaaaaaggttgttgag
ttgacaggggacgtaaccccagacatgcgggctgttgccaatgctgacctgattgtgacc
acacctgagaaatgggatggggtcagtcgtagctggcagaccaggagctatgtcaaggcc
gttgccctgctggtcatcgatgagatccatttactaggggatgaccgagggcctgttctg
gaggtgatagtttcacgtacaaactttatttcatcccacacggagaagccagtgagggtc
gtggggctatcgacggcgctggccaacgcccgggatctggcagactggctggggattaaa
cagatgggactgtacaacttccgtccgtctgtccgtccagtgccgctggaggtccacatt
catggattcccgggtcaacactactgtccacgcatggccaccatgaataagcccactttc
cagtccattaaaacccactccccggataaaccggtgcttgtttttgtgtcgtcgcggcga
cagacgcggctgactgcccttgatttgatcgcctttttagcggctgaggacaaccccaag
caatggctgcacatgggcgagatggagatggagaacatcatatctgggatcaaggacaca
aacctgaagttgaccttggcctttggaatcggtctccatcacgccggtctgatagagagg
gaccgcaaagtttgtgaggagctctttgtcaatcaaaaaattcaggttctaattgctacc
agcactctagcatggggagtcaacttccctgcccacttagtggttgtcaagggaacggaa
tactttgacgggaaaactcgccgttacgttgatttccccatcacagatgttctacaaatg
atgggacgagctgggcggccccagtttgatgatcagggcgtggctatgatcctggtccat
gatattaagaaacatttctacaagagattcctatacgagcctttccctgtggagtcaaat
ctcctggaggtgcttccagatcacatgaacgccgagatagtggcgggaaccgtcacctcc
aaacaggacgccatggactacatcacctggacctacttcttccgccgcttggtgcagaat
cccactttctacaatctggatggtacagactttgactccattaacaagtttctgtcttcc
ctggtggagaaggctctgtatgaactggagtgttcctactgtattgaggtggatgatgat
cagcgaggtgtgcatccaatgaccctgggcaggatctcatcctactattatctcaatcac
aagaccatgaggatgttccgagacgagctcaagtctgagtgttccatggcagagctgatc
gaagtactctctaatgcggaggaatacgctcagctaccggtccgacacaatgaggaccag
atcaatagccagctggcccagcaggtgcccctagaggtcaacccccacacctacgactcc
tcccacaccaagacccacatcctgttacagtgccactttggccagctgcccctcccctcc
agtgactacaacacagacaccaagtctgtactggaccaggccatcaggattctacaggcc
atgttagatgtcagtgctgatgaaggctggcttgtgacatcattacgcatcacgcagctc
attcagatgattgtacagggacgctggtaccatgacaatgcccttttgaccttacctcat
atgacgccatttcttatcagctgcctacgaccaagaggggagggggccaggcagaaggga
ttcccagacattacaggcccggtacagaccctcccagaattcctggctttgtttgacggg
aagtttgatgctgtcatggccatgcttggggaggacatgagtaggaaccaggtcgaccag
ctatatcaggtcataggcaaccttccccagatccaggtcaacctacaggtcaaaggttgg
tgggaagggggcgagggtcaacaggaagccaggaatgtcaacacatcacacacaggtggg
cgtcgaccggagagcgactggattcaggtacatgctgaccaggagtatgtgatagaggtc
agcctaaagaggctcaacagggtcaagaagagagacagcaaagcccatgctccccgattc
ccgaagccaaaggacgagggctggttcctgattgttggggacatagagagccgcgacgtg
atcgccctgaagcgcgtggggttcgtcaggggctccagccgccagtccctggccctgtac
acccccgagacccctggtcgagtcatctacacactctacctaatgagcgactcctacctg
ggcctggatcagcagtatgacatttgtctagaggtcattccagccagtatcgagacccag
gtcaacacggagatagccgcagagctgggcgatttggactttggggagtcttga
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integrated database retrieval system
