Crassostrea virginica (eastern oyster): 111104362
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Entry
111104362 CDS
T09197
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111104362
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111104362
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
TPR_19
NBCH_WD40
TPR_2
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
TPR_6
Beta-prop_SCAP
ANAPC3
TPR_1
Beta-prop_IFT140_1st
TPR_17
TPR_9
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
111104362
NCBI-ProteinID:
XP_022293975
UniProt:
A0A8B8AS21
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Position
7:41122903..41131968
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AA seq
717 aa
AA seq
DB search
MALQSGILKQKFLRETGGLSTQQFQQDLQVTPDLIQRLGLSKELQGHHGCVNCLEWNERG
TLLASGSDDLNVILWDPLRHRTKATINTGHQGNIFSVKFLPNTNDSILVTGAADCKIRVY
DTNREENSHVFSCHIGRVKRLAVAPNVPFMFWSAAEDGTIMQFDLRCQEPNQPNPKNVIV
NLNAHIGHVAEAKCLAINPLRPEYLAVGANDPYIRMYDRRMLVCRSLKVSQETTNRSPWS
WDRASSAAPVSPDDFPIPHDAVTYFIAGHLPQRQQDYKKRYRSLASTYLTFSPDGRELLV
NLGGEQIYIFDVNRHRKAEKFDISMVLAANGVVKDTGSSNGFHIHPHRNGATNGVTNGVS
SGVSAAAAAMMRAEMDVEEKHRDSLVRKRWRASQPGAKPIPPAVEVIKKKANRYFEMDQC
SKAIILYNQAIQRAPWASVLYGNRAAAFMKRKWDGDLYAALRDCHSALQIDPNHLKAHFR
LARCLYELSWPQEAYDCLQQFKNKFPDYAKSNACETLDKDIKAAIYSKTDSEDKSESSPE
KPESFYPSVKRSTSISDQEACWRALAYDYEARFCGHCNTTTDIKEANYFGSNGQYVVAGS
DDGSFFIWERDTTNIVRVLRGDDSIVNCLQPHPTQCLLATSGIDPVVRLWSPRVEDGSKD
EREVDNSDDAALANQKRMNADPLEVMLMNMGYRITGVFDVDEEEQNNNDQSVQCRPS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcagtcagggatactcaagcaaaagtttctgcgagaaacaggcggcttgagc
acccaacagttccaacaagacttacaggtaacccctgacctgatccagcgattggggctg
agtaaagagctacagggccaccatggctgtgtaaactgtttagaatggaacgaacgagga
acgttactggccagtgggtcggacgacctgaatgtgatcctgtgggaccccctgagacac
cgaaccaaagccaccatcaacaccggtcaccagggcaacatattctccgtcaagttttta
cccaacaccaacgactcaatcctagtgacgggggcagcggattgtaagatccgagtgtat
gacacaaacagggaagagaactctcatgtcttctcctgccacattgggcgcgtcaagcgg
ctggccgtggctcccaatgtcccgtttatgttctggagcgctgcagaggatggcaccatc
atgcagtttgatctcagatgtcaggagccaaatcaacccaacccaaagaatgtcattgtc
aacctgaatgcacacatcggtcatgtggcggaggccaaatgtctggccatcaatcccctg
aggccggagtacctcgcagttggtgctaatgatccgtacatccgaatgtacgatcgccgc
atgctggtgtgtcgcagcctcaaagtgtcacaagaaaccacaaacagatctccttggtcc
tgggatagggccagctcagcagccccagtctcccctgacgatttccccatccctcacgat
gctgtcacatacttcatagccggtcacctgccccagagacagcaggactacaagaagcgc
tatcgctccctggcctccacctacctgacctttagccccgacgggcgggaacttctggtc
aatcttggcggggaacagatctatatcttcgacgtgaatcgacacaggaaggcagagaag
ttcgacatatctatggtactggctgccaacggagttgtaaaagataccggcagcagtaat
ggcttccacatacacccccacagaaacggggcgactaatggagtgactaacggcgtctct
agcggcgtttcagcggcagccgcggcaatgatgcgggccgagatggatgtggaggaaaag
caccgcgatagtttagtgaggaaaaggtggagggcctcccagcctggtgctaagcccatc
cctccggctgtagaggtgatcaagaagaaggccaaccgctactttgagatggatcagtgc
tccaaggccatcatcctgtataaccaggccatccagcgagccccctgggcatctgtgctc
tatggaaacagagctgccgccttcatgaaaagaaaatgggacggcgacttatatgctgcc
ctccgagactgccacagtgctttacaaattgacccaaaccacttaaaagctcacttccga
ttggctcgctgtctgtatgagctttcttggccacaggaagcatacgactgtctacagcag
ttcaagaacaagttcccagactatgccaaaagcaacgcatgtgagactctggataaagac
atcaaagcagctatttactctaagacagattcagaggataaatctgagtcttcccccgag
aagccggaatcgttttacccgtccgtgaaacgcagcacgtccatctcggaccaggaggct
tgctggcgagccctggcctacgactacgaagctcgattctgtggccactgcaacactacc
actgacataaaagaggccaactactttggaagtaatggccagtacgtggtggctggatcg
gatgatgggtctttctttatctgggagagagacacgacaaacattgtccgagtgttaagg
ggagatgactctattgtaaactgtcttcagccacaccccacgcagtgtctcctggcaacc
agtggcatcgacccggttgtcaggctctggagtcccagagtagaggatggttcaaaagat
gagcgagaagtagataactcggacgacgcggctttggccaatcagaagcgaatgaatgct
gaccccttggaggtcatgttgatgaacatgggatacaggatcacgggagtgttcgatgtg
gacgaggaggaacagaacaataacgaccagtctgttcaatgtcgacccagctag
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