Crassostrea virginica (eastern oyster): 111104603
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Entry
111104603 CDS
T09197
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111104603
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvn01002
]
111104603
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111104603
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111104603
Peptidases and inhibitors [BR:
cvn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111104603
Ubiquitin system [BR:
cvn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111104603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zinc_ribbon_9
Motif
Other DBs
NCBI-GeneID:
111104603
NCBI-ProteinID:
XP_022294335
EnsemblRapid:
LOC111104603
UniProt:
A0A8B8ATC4
LinkDB
All DBs
Position
7:39764380..39773915
Genome browser
AA seq
1039 aa
AA seq
DB search
MRVLESGATPSYNMGKNKKHKIRKTKEVSDSSDDALAVPSCNHINMAVNVAAMRKGLLKQ
VYGECASCTNETKVSGEGETSLGAEAAPALLETEPTLWVCLQCGNQGCDRNSREKHALKH
YETPRSSCHCLVINTTSWTVWCYKCDDEVQLEQSKRLQESVDIIRKQAGLPQSETVRKQS
QTISSSSVVDQAFKPSTLTPRSSGLCSKVKGLSNLGNTCFFNAVMQNLTQTPCIESVVVE
RSKKGRLSTLTCKGDSDLDSSSGGEDNDVETPIDLSPIEIVLPEAGPLTQTMIAFLQEMN
NSTGRSSTVNPTPLFSQICKKAQRFRGFQQQDSHELLRYLLDNMRTEEIKRGQSGILKHF
KLPENVNPKKVDDEMKEKIKEYGRQVKHTFVDSLFGGYLMSTVTCEECKNISQIFEPFLD
LSLPVTEEKPTRPNQMLGGRKKESVTSEHNEETVLEHHDRPSKHLEKKLKKQAKREAKKK
AKISKNRVSPSEDPDTAKIGEEEGEQEGAEREEEGAGKDQDEESSSREDPSDADIEDNLE
SDTSRCFSKHSLENSITELPSSSQENVGADQIGSHEVDVGTSSSNTDTLTSGTSTSTIKQ
EEEEEVQKTSTTQNHTGDLDLKGDNLNNKDSLSNTKLGLNGVHENAVFENECSTSEGCFN
NCQENGDIENEEAIENSYRISSESNINHGIPKIKHLTNYESELCKRTNSENGEPQNGFHP
IKKEGIMNGESGNSHSRNSSTSEMTAKLGNLILEDSAALNNQEEGHRENSFHETQGGGSN
CEKGSVNVSTPTPQHSNNKKEIKKEALVRSKVTLGAKYHPTSRECTIMSCIHQFTSAELL
TGNNKFGCDKCTQIKYKQGLSKDKKEKVYSNAAKQYLINTPPAVLTLHLKRFEQVGFSSR
KVNRHVDFPFVLDLAPFCSSLCQGVRPGQKKVLYALYGVVEHSGRLNAGHYTAYVKVRPN
IGITTDFLSSGAPSIKDCIKRYLEVQNSTASLEEQEESIVERLVPPGKWYHISDSRVSET
TESTVQRAQAYLLFYERIY
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgagagttttagagtcaggggcgacaccgtcttacaacatgggaaagaataagaagcac
aaaattcgtaagaccaaagaggtgtccgactcttcagatgatgctttagcagtgcccagc
tgtaaccacataaacatggctgtcaatgtggctgccatgaggaagggtctgttgaaacaa
gtgtatggagaatgtgcttcttgtaccaatgagaccaaggtcagcggcgagggagagacc
agcctgggggctgaggccgcccccgccctcctggagacagaacccaccctatgggtttgt
ctgcagtgtggtaaccaggggtgtgatagaaactcgagagaaaagcatgcgttgaagcac
tatgagacaccacggtcgagttgtcactgcctggtcattaacaccacgtcctggactgtt
tggtgttacaaatgtgatgacgaagtacagctagagcagagtaagagactacaggaaagt
gtggatatcatacggaaacaggctggactccctcagtcagagacagtccgtaaacaaagt
cagactatcagctcctcatctgttgttgaccaagccttcaagccatccactttaacacca
aggtcatcaggactttgctctaaggtcaagggattaagtaatcttggaaatacttgcttc
tttaatgctgttatgcagaatttgacacaaactccttgtatagagtctgtggtagtagag
agaagcaaaaagggccgtctaagtacccttacctgtaagggggacagtgatctagattcc
agctcagggggtgaggacaatgatgtagaaactccaatagatctatcaccaatagaaata
gtattaccagaagctggaccgttgacacaaaccatgatcgcctttctacaggaaatgaac
aactcgacaggtcgctccagcaccgtcaaccctacacccttgttcagtcagatctgcaaa
aaagctcagagattccgaggcttccaacaacaggacagccatgagcttctccgctacctg
ctggacaacatgagaacggaagaaatcaagagaggacagtctgggatattaaagcacttt
aagctgccagaaaatgtgaacccaaagaaagtggatgacgaaatgaaagaaaaaattaaa
gaatatggtcgacaagtgaagcacacctttgtggattccctgtttggaggatacttaatg
agcacagtcacctgtgaggaatgtaaaaatatatctcagatattcgagccattcctggac
ttgtcacttcctgtaacagaggagaaacctacgcgacccaatcagatgttaggaggacgt
aaaaaggaaagcgtgacctcagaacacaacgaggaaaccgtccttgaacaccatgacaga
cccagcaaacacttggaaaaaaaactcaagaaacaggccaagagggaagccaagaagaaa
gccaagatctccaagaaccgagtgtcaccctcagaggaccctgatacggcaaagattgga
gaggaggagggggagcaggagggggcagagagagaggaggagggggctgggaaagatcag
gatgaggaatccagcagccgggaagacccctcagatgctgatattgaagacaacttagaa
agtgatacctcaaggtgtttcagtaaacacagtctggaaaactcaattactgaactccct
tcatcatctcaggaaaatgtaggagcggatcaaataggcagtcatgaggtggatgtcgga
acatcgagtagcaatactgatactctaacctcaggaaccagtacctcaacaatcaagcaa
gaggaggaggaagaggtacagaaaacctcaaccactcaaaaccacacaggagacctagac
ctcaagggggataacctcaacaacaaagacagcctcagcaacaccaaactgggattaaac
ggtgtccatgaaaacgctgtgtttgagaatgagtgttctacttctgaaggctgtttcaat
aactgtcaagaaaatggtgatattgaaaatgaagaagctattgaaaattcctatagaatt
agttccgaatctaacattaatcatggcattcccaaaattaagcatttaacaaattatgaa
agtgaattgtgtaaaaggactaatagtgaaaatggggagccccaaaatggatttcatcca
ataaagaaagaaggcattatgaatggtgaatctgggaactcccactccagaaacagcagc
actagtgaaatgacagcaaaacttggcaatttaattctagaagactctgccgcacttaat
aatcaagaagaaggtcatcgagagaacagtttccatgagactcagggtggtggatctaac
tgtgaaaaagggagtgtaaatgtcagtacaccaacaccacagcattccaataacaagaaa
gaaatcaagaaagaagcattagtcaggtcaaaggtcaccctgggggctaaatatcatccg
acctccagggaatgcaccatcatgtcctgtatacatcagtttacctctgctgaacttctg
acgggaaacaacaagtttggatgtgataagtgtacgcagatcaaatacaagcaaggccta
agcaaagataaaaaggagaaggtttattccaatgcagccaagcagtatttgataaataca
ccaccagcagtgcttactttacaccttaaaagatttgaacaggtgggcttcagttctcgc
aaggtgaaccggcatgtggatttcccctttgttctggatttggcccctttctgtagttcc
ctgtgtcagggagtaagaccaggccaaaagaaagtcctgtatgctttgtacggagttgtg
gagcacagtggaagactgaacgctggccattacaccgcgtatgtcaaggtccgccccaac
atcggcatcaccacagatttcctcagctctggggccccctccattaaggactgcatcaag
cggtacctggaggtccagaacagcacagctagcctggaggagcaggaggagagcatcgtg
gagagactggtcccccccggcaagtggtaccacatcagtgacagccgcgtcagcgaaacc
acagagtccacggttcagcgagcacaggcctatctcctcttctatgaacgaatctattaa
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