Crassostrea virginica (eastern oyster): 111104635
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Entry
111104635 CDS
T09197
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111104635
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111104635
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GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
DHU1_N
LRR_RPS2
LRR_6
LRR_EndoS
LRR_9
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
111104635
NCBI-ProteinID:
XP_022294406
UniProt:
A0A8B8ATI9
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Position
7:26259..28653
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AA seq
592 aa
AA seq
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MITNIPDFCNSDGNNSKIEQLNLQYTSISGLREDNFKCLYSLQFLDLKHNILKDVPNFCS
RSNSSYTPHLKHLYLRNTSIVLLSGYKFLCLPKLQELDLCSNCLKVIPSFCNENNSSVNP
SLTALDLSWNEIHNIFANSFRCLSSLKTLRLRYITISKLENNVFRPLTSLRTLEISNCKN
LKHIRKDAFNISSVVTLTFSYNDFKFKDISRYFPDYLFRFCKNVTKLVLSGNHFPTNPVA
QTILRPLEKLKYLYLTNSRLDTIHEHTFNSSRRLRTIFLDNNRLTGWDKNVFNNLSQLSY
LNLAFNKIAVFDKNSIPMKILNNLKVFNLAYNPFDCGCDMIWFKRWSLTTNVTLLSFPRM
YSCQTPVSMFHKPLVSLTLTEEDCKEKNPWLVVITSVSAGALLLLFVSITISIQMPTIKN
YMYYLRLKKMGYVKLINEQEFTYDAYVVYCEEDENWVIHTLVSVIESKGFRLCIPDREFE
VGADRCDQIISAFNESKKILVVFSNNFAKNEWCLWQLNLVEERLRRSGNSAVIFVLYKNI
SSKNMISSLHRTLKQKAILTWYEGGRRENMFWKVVVLALGSPLGEPPISVIQ
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgataaccaatattcctgatttttgcaattctgatggaaataactcaaaaattgaacaa
cttaacctacaatatacatctatatcaggtttgcgggaagataatttcaaatgtttatac
tctcttcaatttttggacttaaagcataatatattgaaagatgttccaaacttttgtagc
agaagtaactccagttacactccccatttaaaacacctttatcttcgtaacacaagtatt
gttttattaagtggttataaatttctgtgccttcctaaattgcaagagctagatttgtgt
tcaaactgcttaaaagtaattccatcattttgcaacgaaaacaatagtagcgtcaaccct
tctctcacggcattggatttgtcctggaatgaaattcataatatctttgcaaacagtttt
cggtgtctttcctctttaaaaacattgcgtttgcggtatattactatatcaaagcttgaa
aacaatgtgtttagaccgttaacttcactgcgcactttagaaatttcaaactgcaagaat
ttaaagcatatacggaaagatgcctttaatatttctagtgtcgttacattaacattttct
tacaacgattttaaattcaaggatatttccagatatttcccggattatttgtttcgattc
tgtaaaaatgttacaaaattagttctaagtggaaatcactttccaaccaaccctgttgcg
caaacgatactgagacctttggaaaaactaaaatacctgtatctgacaaatagcagacta
gatactattcatgaacatacttttaactcatcaaggagattaagaacaatttttttggat
aataacagactaactggatgggataaaaacgttttcaataatctatctcaactatcgtat
ttgaatcttgcattcaataaaattgcagtcttcgataaaaactcaataccgatgaaaatt
ttaaataatctcaaagtattcaatctggcttacaacccctttgactgcggttgtgatatg
atttggtttaagagatggagtcttactaccaatgtaactctgctaagtttcccgagaatg
tactcgtgtcaaactcctgtcagcatgttccataaaccattggtgagtctcactctcact
gaagaagactgcaaggaaaagaacccatggcttgtagtgattacgtcagtatccgccggc
gcattgctactactgtttgtgtcgataacaatctccatacagatgcccacaattaaaaat
tacatgtactacttgcggttgaaaaaaatgggatacgtcaagctaatcaacgaacaagaa
ttcacatatgatgcctatgttgtttactgtgaagaagacgaaaattgggtcattcataca
cttgtgtctgtaatagaatccaaaggatttcgattgtgtattccggacagggagtttgaa
gtgggcgctgataggtgtgaccaaattatatctgcattcaatgaaagtaagaaaatcctt
gtcgtgttttctaataattttgcaaaaaatgaatggtgtctctggcaattgaatctagtc
gaagaaagattgcgacgaagtgggaactctgcagttatatttgtgttatataaaaacatc
agtagtaagaacatgatttcatctttacaccgtactctgaaacagaaagccatacttact
tggtacgaaggtggtagacgtgaaaatatgttttggaaagttgtagttctcgccttagga
tcaccactcggagaacccccgatttctgtcattcagtga
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