Crassostrea virginica (eastern oyster): 111105279
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Entry
111105279 CDS
T09197
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111105279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111105279
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cvn04031
]
111105279
Membrane trafficking [BR:
cvn04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
111105279
GTP-binding proteins [BR:
cvn04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
111105279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
GTP_EFTU
TetR_C_16
Septin
Motif
Other DBs
NCBI-GeneID:
111105279
NCBI-ProteinID:
XP_022295183
UniProt:
A0A8B8AWU0
LinkDB
All DBs
Position
7:20144426..20148046
Genome browser
AA seq
214 aa
AA seq
DB search
MVEPIFDFQFRLILIGDSTVGKSSLLKYFTEGKFSDECDPTVGVDFYARLIEVQQGVRVK
LQLWDTAGQERFRSITRSYYRNSVGALIVFDITNRRSFENLAGWLHESRAHIEPQKVVYV
VVGHKADRDDERQVTTREGRMFAEMNGLKYVETSAKTGQNVEEAFLLVAREVHALLEQGK
IKVEEGWDGVKTGFTRPAQTFHVTEGEKESGGCC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggtggaacctatttttgattttcaatttagactcattcttattggagatagcactgtt
ggaaagtcgtctttgttgaaatatttcacagaggggaagttttcagacgaatgtgaccct
acggtgggtgttgatttctatgcgcggctcatcgaagtacaacagggagtgagagtgaag
cttcagttatgggacacagcaggacaggagcgattccgctccataacgaggtcttactac
aggaattcagtgggagcactgattgtctttgacatcacgaatcgtagaagcttcgaaaac
ctggcagggtggctgcacgaatcaagggcccacatcgagccccagaaagttgtgtacgtt
gtcgttgggcacaaggctgaccgagacgacgaaaggcaagtcaccacccgagaaggaagg
atgttcgctgaaatgaatggactaaaatacgtagagacttcggccaaaacgggacaaaat
gtggaagaggcctttctgcttgtggccagagaagttcatgcattgttggagcaagggaaa
atcaaagtggaagaagggtgggatggggtgaaaacgggatttaccagaccagcacagaca
ttccatgtgacagagggggagaaggaaagtggagggtgttgctga
DBGET
integrated database retrieval system
