Crassostrea virginica (eastern oyster): 111105422
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Entry
111105422 CDS
T09197
Name
(RefSeq) tubby-related protein 4-like isoform X1
KO
K24720
tubby-related protein 4
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
111105422
Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
Other domain-containing proteins
Tubby family proteins
111105422
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_Prp19
SOCS_box
Beta-prop_ELP1_1st
Beta-prop_EML
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
111105422
NCBI-ProteinID:
XP_022295416
UniProt:
A0A8B8AVW0
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All DBs
Position
7:6766067..6906444
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AA seq
1108 aa
AA seq
DB search
MHVHFEQNNSTRTECTIHSLSWMGKVPDVPDNNGGWKLNRNQYYMEGWLASGNAKGVVGV
TFTTSHCKKYDPPPRSNFNLRGHKSEVTLVRWNEPYQKLATCDVQGAIFVWIKHEGRWST
ELINDRNSQVTDFSWSHDGRMALICYCDGFVLVGSVAGQMYWSSMLNLDQTTITCGVWSP
DDQQVLFGTMDGQIIVLSSTGTMITQVVVLQGSEIISLTWSCEKFNMDESSAEQNENFTA
PTVSTPKSVDAVLAVCFKSGAIYLMSNYDDLHPRIIYTHLKGSIKLDWSNCGEVLAVGGF
TRLPNLQCQNEIHFYTKEGQLLHRVYLPCQGKPLTALCWGHNDRRLFVAAGFNLHVAWVM
KKVPPLQFLCQRVIQICIRNEKLIRKLPLPPRLQHSVQTMFSPTIKSYIPDPFKLREFIC
SPPPASERLFCTMIRHGEETSGGHYTLYLEYLGGLIPLLKGKRASKLRPDFVIYDPKIGA
KAGSENQNAPPEFDFEASLTDSDEDIPSDGCGSPRMQRKKRPKIFRAKKVDRSITFRTLD
ELLYNDSLPESNKLVEVTSNIWGTKFKLTGLAPFLPEDLGNVLYKTSLLHLQPRQMTITI
TGLNTVNQPLSRDPNFTPAGHYDEEGDCRSNDDLPIDIGDIGQEDGILVSETYNSEHVNR
VTSHVFMDIKKSSNSSNQNDEKVLCDISGNLSSNNNVINGERLHWSPNMKNRSLSPASES
VAQNNAFNSVDNSVLKDKFIGQGAIPKVSSTEVTVGTPSGEALVHTNNNSSSVSSANMRT
SLHNELSSIMKDSDENRWADLANPGIKFIDDEGINNRNSENSDNMAGIICDSSQMTPTLS
DNQKRLYLETLTNVDSDAMICDHSRDPSESGEDVNTMLGSLDDVHKDTCRSNSIFSGASC
SVFHYDDEVVDPASFTRNTSTMEISHSASLPNSPLHRAADSPMREIREEILQGTCRHYSP
IFKRKSRHFNPRNYHNEGEDHTMDDGKYSQNFKNLETFQKAQLKQKLQKVRKRSDDRGRS
RFPHFRHRQFVMHNKAPLWNENSQVYQLDFGGRVSQESAKNFQIEFRSRQVMQFGRIGSN
AYTLDFQYPFTTLQAFAVALANVTQRLK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgcattttgagcagaacaactcaacccgcacagaatgtacgattcactcctta
tcatggatggggaaagtcccggatgttccagacaacaatggtggatggaagctcaaccgg
aaccaatattacatggaaggatggctagctagcggcaatgccaagggggtggtgggggtc
actttcaccaccagccactgcaagaagtatgatccaccacccagaagtaacttcaatctc
cgagggcacaagagtgaggttaccttggttcgatggaatgagccctaccagaaacttgcc
acatgcgatgtccagggagccatatttgtctggattaagcacgaaggaagatggtctacg
gagctcatcaatgataggaatagtcaggtgacagacttttcctggtctcacgacggcagg
atggccctgatttgttactgtgacggatttgtactggtggggtccgtggcgggacagatg
tactggtcctccatgctcaatctggaccagactaccattacctgtggggtatggtcccct
gatgaccaacaggtgttatttgggaccatggatggacagatcattgtgctgagttccact
ggaaccatgatcactcaggtggtggtgctgcaagggtccgagattatctcccttacgtgg
tcctgtgaaaaattcaatatggacgagtcgtctgcagaacagaatgaaaactttactgcc
ccaactgtgtctacccctaagtctgttgatgcagtcctggcagtgtgcttcaaaagtggt
gccatttacctgatgtccaactatgatgacttgcatcccaggatcatctacactcatctg
aaaggatccattaaattagactggtccaactgtggagaggtcttagctgttgggggattc
actcggctacccaatttgcaatgccaaaatgagattcatttttacaccaaagaaggacaa
ctcttacacagagtttatctcccctgtcagggtaaaccccttacagcactctgttggggt
cacaatgaccgccgcttgtttgtggctgcagggttcaacctccacgtggcatgggtgatg
aaaaaggtccctcccctgcagttcctctgtcagagggtcatccagatctgtatccgaaac
gagaaactcatccgaaagctgccactcccacctcggctacagcacagtgtccaaaccatg
ttctcacccaccatcaagagctacattccagaccctttcaagctgcgagagttcatctgc
tcaccaccccctgccagtgagcgattgttctgtacaatgatcaggcacggagaggaaacc
tcagggggtcactacacactatacctggagtacctcgggggactcatccccttactcaag
gggaagagggccagcaaactccgcccagactttgtcatctacgaccccaagattggggcc
aaagcaggcagcgaaaatcaaaatgctcctccggagtttgattttgaggccagcctcaca
gactcggatgaggacattccttcggatgggtgtggttctcccagaatgcaacgcaagaaa
cggcctaaaattttccgagcaaagaaagtggacagatccatcactttccggactcttgat
gaactcctatacaatgacagtcttccagagagcaacaaattagtggaggtgacatccaac
atttgggggaccaagttcaaactgactggcctagcgccattcctgccagaggacttggga
aatgttctgtacaaaaccagtctcctgcatctgcagcctcgacagatgaccatcaccatc
actggcctcaacacggtcaaccagcccctgtccagggatcctaattttacccccgcaggg
cattacgatgaggagggagattgtagatcaaatgatgatctacctattgacataggtgat
atagggcaagaggatggaatattagtctcagaaacttataacagtgagcatgtgaatcgt
gtgacaagccatgtcttcatggacattaaaaaatcttccaattcatctaatcaaaacgac
gagaaggtcttgtgtgacattagtggcaatttgagtagtaataataacgtgataaatggt
gaaagactgcactggtcaccaaacatgaaaaacagatctctttctccggcatctgaatcc
gttgctcaaaataatgcttttaacagtgtagacaattctgttctgaaggacaaatttata
ggtcaaggtgcaatcccaaaggtcagctcaaccgaagtgacggttgggacacctagtgga
gaagcattagttcataccaataataattcatcatcggtgtcaagtgccaatatgaggact
agtttacacaatgagttgtccagcataatgaaagacagtgacgagaaccgctgggccgat
ctcgcaaatcctggtatcaaatttatagatgacgaaggaataaacaatcgcaactccgaa
aactctgacaatatggcaggaataatttgtgattcaagtcagatgacacccactttgtct
gataaccagaaaaggttgtacttggagacgctgactaatgttgactcggatgcaatgatc
tgtgaccatagccgagacccctcggagagcggggaagacgtgaacacaatgttaggatct
ctagatgatgtgcataaagacacatgtagaagtaatagtattttctcaggtgcttcttgt
tcggttttccattatgacgatgaagtggtggatccagcttcatttacacgcaacacttcc
actatggaaataagtcatagtgcctccttgccaaactctcctctgcatagagctgcagat
tcccctatgagagaaattcgagaggaaatcttgcagggtacatgcaggcattacagccct
atatttaaaagaaaatctaggcattttaacccaagaaattaccacaatgagggtgaagat
catacaatggatgatggaaaatattcgcagaactttaagaatttggagactttccagaaa
gcgcagttaaaacagaagcttcagaaagtgcgaaagaggagcgacgatagaggaaggtct
aggtttccccactttcgccatcgtcaattcgtcatgcacaacaaggctccattatggaac
gaaaacagccaagtgtaccagctagactttggaggtcgagtcagccaggaatctgcaaaa
aacttccagatcgagtttaggagtcgccaggtgatgcagtttggtagaataggaagcaat
gcctacacactggacttccagtatcctttcaccactctacaagcgtttgccgtagcgttg
gcaaacgttactcaacgtctgaagtaa
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