Crassostrea virginica (eastern oyster): 111105858
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Entry
111105858 CDS
T09197
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111105858
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111105858
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
111105858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-TRAF
Sina_ZnF
zf-RING_2
zf-RING_5
zf-rbx1
zf-C3HC4_4
PDZ_Tricorn
zf-RING_6
Ntox28
Motif
Other DBs
NCBI-GeneID:
111105858
NCBI-ProteinID:
XP_022296020
UniProt:
A0A8B8AXX3
LinkDB
All DBs
Position
8:36869826..36951154
Genome browser
AA seq
1094 aa
AA seq
DB search
MGFDVDNFVTTVGVDLRCELCRGVLDNPLRTTCSHIFCSGCILPWVVRTGKCPRGCQRLT
PGDLGNDLQLRDCILNLSVHCEFRDRGCRRLVRLREIGTHRAECDHRPLPCTNEDCKLVL
SFRDLEKHVTGDCPYKEVGVCPRGCGLVLRQGSAGTHDCVSALRAYIAGQENKINTMETE
LQRARHSATAREQELTNQIHALRRENQSQALDYRRKLDDLSDRIQKRDIMHKNVATNTED
AEWRALTVELVRQGGSLGFNITGGVTSEPNNNETEKQGTEMKGGVMVSKVTQGSPADKTD
LRIHDIITQVNGQDLSQASHEEAVEAFRAASEPITVEVLRRVSKNKMKNTPPNMVSTSTQ
TEEDCYGRPPTPPFFTYPPGLYQAGTRRPLVFSPSTELGLTDIEMAHTLDYDDPYFDERE
GYDIEYEEVVLQRPLEAQKLGLTLCYGSLEDETTDIFISEVEAQSIAGQDGRIREGDQVL
QVNGVDVRSRDQAIQLFSEKGSEIKLLLARPQLQLDDGFMEDQNVSLDDLHMDIVERHHR
DNMQIMASMLARGHMEEEGGTTDTATTENSLHKHEKDSGVGRTDESTRNDESSEQDPDTE
CTNSPAATSKFRRKKPNYSDDSVLSNEVTDVTDYSNECDSFRAHLASRCVGNECEGKRKD
SISSIERELALLNREMETIHMECQEMCDKHTQDQSKHQLQREALQIKSPRIVPRMGTRLE
YLKYVQLYDNPNSLDRRDTKPSSQPVKCDKDASTTTTSAYNTGESCRSTPLTLELNQGSD
EGEFRNSMLCLAPSNTNVSTLSDTEKQTQTPCGQNNVSSDEYQSIDGDLNASATLRKQNC
MGESLQDLYMQYADVMYTNQANLQHTIAIQQKLFQQQIEQNPMRTRKNNGISVPPPLSSA
SSVSGDKTRDSPNVSRDNVNVSRDSPNVSRDSVNISKDSPNATPPDSSGQMEWVVKRRPD
GTRYITRRPMKSKLLKERAKKISEERCGMTTDDDAMSELKFGRYWSKEERKKHIEKARDH
KRKRECMMKAKMETLKEAEEKKEVNIVELSHRKMMKHKNKKVLDNFVTVQEMLAHGSRVS
DGKTYNPLLSVTTV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgatgtggataattttgtgacgacggtgggggtggacttgcgatgtgaattg
tgtcgtggggtgctggacaacccgctaaggaccacgtgcagccacatcttttgctccggg
tgcattctcccgtgggtggtcaggactgggaagtgccccagaggctgccagcgcctcacc
cccggggatctcggcaacgatctacagttacgcgactgtatcctgaatctaagcgtgcac
tgtgagtttcgggaccgggggtgtcggagactggtccgactccgggagatcgggacccac
agagccgagtgcgaccaccgccccctcccctgcacgaacgaggactgcaaactggtcctc
agcttccgggacctggaaaagcacgtgaccggggactgtccttataaggaggtgggggtt
tgtccgagggggtgcggcctggtgttgcgtcaggggtccgcggggacccacgactgtgtg
tcagccctcagggcctacatagcggggcaggagaacaaaatcaacaccatggagaccgag
ttacagagggccaggcacagcgccaccgcccgggagcaggagctgaccaatcagatccac
gccctccgccgcgagaaccaatcacaggcgctggactatcggcggaagctggacgatttg
tccgacaggatccaaaaacgtgacattatgcacaaaaatgtagcaacgaacacggaggat
gcagaatggcgcgcgttgacagtggagcttgtgagacaaggcggatctctgggcttcaac
atcacagggggagtcacgtcggaacccaacaacaatgaaaccgagaagcaggggacggaa
atgaaaggaggggtgatggtttccaaggtgacacagggcagccccgcagacaaaacagac
ctcagaatccatgacatcatcactcaggtaaatggtcaggacctgtcgcaagctagtcac
gaggaggcggtggaggcgttccgagccgcgtcagaacccatcaccgtggaggtgctgcgt
cgcgtcagcaagaacaagatgaagaacacgcccccaaacatggtgtctacctctacccag
acggaggaggactgctacggccgaccccccaccccgcccttcttcacctaccccccaggg
ttgtaccaggccgggactcggcgccccctggtgttttcccccagcactgaactgggactg
acggacatcgagatggcccacaccctggactacgacgacccgtattttgatgaacgggaa
ggatacgacatcgaatacgaggaagtggtattacagcgccccctggaggctcagaagctg
ggacttaccctgtgttacggctcactggaagacgaaacaacggacatcttcatcagcgag
gttgaggctcaaagtatagcaggccaagatggtcgaatcagggagggggaccaggttcta
caggtgaatggcgttgatgttcgaagtcgggaccaggccattcagctcttttctgaaaaa
ggctcagaaatcaaactgctgttggctcggccacaattacagctggatgatggattcatg
gaagatcagaatgtgagcctggatgatttacacatggacattgtggagaggcatcaccgt
gacaacatgcagatcatggcctccatgttggctcggggtcacatggaggaggagggagga
accaccgacacagccaccacggagaactcgctccacaaacatgagaaagacagcggggtg
gggcgcaccgatgagagcacgcgcaacgacgagagctcagaacaggatcccgatacagag
tgtaccaactccccagctgctacgtcaaagttccgccgaaagaaacctaactacagtgac
gacagtgtgttgtccaacgaagtcacggacgtgacggactacagcaacgagtgcgacagc
ttccgcgctcatctcgcgagccggtgtgtcggtaatgagtgtgaaggcaagagaaaggac
tcaatcagcagcattgagcgcgagctggctctactcaaccgcgaaatggaaacgattcac
atggagtgtcaggaaatgtgtgacaaacacacccaggaccaaagtaaacatcagcttcag
cgagaagctttacagattaaaagtcccagaatcgtacccagaatgggaacacgactggag
tatctgaaatatgtgcaattatacgacaaccctaattcgctggaccgtcgagacaccaag
ccctcgtcccagccggtcaaatgtgacaaggacgcttctaccaccaccacaagtgcttac
aacacgggggagagctgccgcagcacgccgctcaccctggagctgaatcagggctcggac
gaaggggagttcaggaactccatgctgtgtcttgctccgtctaataccaatgtgtccacg
ctgagtgacaccgagaaacaaacacagaccccgtgtggccagaacaacgtgtcaagcgac
gagtatcagtccatcgatggggatttgaacgcctcagcaacgctgcgtaaacagaactgt
atgggggagtcgctccaagacctatacatgcagtacgcagacgtgatgtacacaaaccaa
gccaatctccagcacaccatcgccatccagcagaaactgttccagcagcagatcgagcag
aatcccatgaggaccagaaagaacaacggaatttctgtacccccacccctgtctagtgcc
agctcagtcagtggggataaaactagagacagcccgaatgtctcaagagacaacgtgaat
gtctccagagacagcccgaatgtctccagagacagcgtgaatatctccaaagacagcccg
aatgccacgccccccgacagcagtggacaaatggaatgggtggtcaaacgtagaccggat
ggaactcgctatattacacggcgaccaatgaaaagtaagctactgaaagagcgagccaag
aagatatcagaggagaggtgtggaatgaccacagatgacgatgcaatgagcgaactcaag
tttggccggtactggtccaaggaagagcgcaaaaagcatatagaaaaggcacgcgaccac
aagcgcaaaagggagtgcatgatgaaggccaaaatggagacattaaaggaagctgaggaa
aaaaaggaagttaacattgtggaacttagtcatcgcaaaatgatgaaacataaaaataag
aaagtgttggacaactttgtgacagtgcaagagatgttagctcacggcagtcgcgtgtcg
gatgggaaaacgtacaacccgcttctgtccgtgacaaccgtatga
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