Crassostrea virginica (eastern oyster): 111105897
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Entry
111105897 CDS
T09197
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvn03016
]
111105897
Enzymes [BR:
cvn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
111105897
Transfer RNA biogenesis [BR:
cvn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111105897
Prokaryotic type
111105897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
LZ3wCH
Motif
Other DBs
NCBI-GeneID:
111105897
NCBI-ProteinID:
XP_022296061
UniProt:
A0A8B8AY05
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Position
8:48403826..48415260
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AA seq
677 aa
AA seq
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MTRRGKGRFGGRGHWRGRGRGRGGYGRTSSESVDPEVPGSQGAETEGTEEGGQEEQGEME
GTVLKEGDVGITEYISSTPGFRAIIKLRYSDFIVNEIDEEGKLVKLTNLDVDPTLIQAME
EKEGEEGEEDSVLEGVLSPEQKEMLDDFNANPDGNRTIDICSPDDKDTRTKLHKVVKELY
KNLESDSFFENETKFIRITAKGKGNRAAGHFNRQRPEWPTGCGNYCRFVLYKENMDTIEA
IYKLSKFFHINKNMFQFAGTKDKRAFTSQDVTVYRVKAERLASANRHLYQIRLGNFRYVD
RPLKLGQLSGNRFTIVLREVTGSEEVINTALESLKTHGFINYFGMQRFGTTSIPTYTVGK
ELLRGNFKEAGELILQPRAGEKEYLTQCRKSWWKDKNCMQMLSALPRKYNIERALLEGLI
KYGENNYANAFQMIHRNTRMLYIHGYQSYIWNCVVSRRLKEFGFKPVVGDLVYKGDLKDL
ATKDENQPSGANGNTEDSDNSSRVTPAVVTEETLSQYTIHDVLLPLPGFDVLYPENKVGM
WYTELLAADGLTVEGLKNPNKQYALTGRYRRLIVLPNDLNWQLYMYSDYTKQLTQSDLDL
IQEKPEPTSDPDSTTKALKIELSLPQSCYATMALREILKIDTSSAYQITLNPSIKPDQSA
TAEVVTETQNQQQTSDT
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgacacggagaggaaaaggtagatttgggggaagaggacactggagaggaagaggaaga
gggagaggggggtacggtaggacctcgtcagagtccgtcgacccagaggtccctggcagt
cagggggcagagaccgagggcacagaggaggggggacaggaggagcagggggaaatggag
gggacggtcctcaaggagggggatgttggaattacagagtacatcagttctaccccagga
tttcgagccattatcaaactaaggtattcagacttcattgtgaatgaaattgatgaggaa
ggaaagcttgtgaaactgacaaacttagatgtcgaccctacccttatccaggcaatggaa
gagaaagaaggggaagagggggaagaggattcagttttggaaggagttctctcccctgaa
cagaaggaaatgttagacgattttaatgctaacccagatggtaatcgcacgattgatatc
tgttcaccagatgataaagataccagaaccaaactacacaaagttgtcaaagagctctac
aagaacttggaatccgattctttctttgaaaatgagacgaagtttatacgcataacagcc
aaagggaagggaaacagagcggcaggccacttcaatcgacagcgccctgaatggcccacg
ggttgtggcaattactgccgctttgttctatacaaggaaaacatggacacgatagaggct
atttataaactctccaagttctttcacataaataagaacatgttccaatttgcgggaacc
aaggacaaacgagcctttacctcacaagatgtcactgtctacagggtcaaggcagaaaga
ctagccagtgctaatcggcatctttaccaaattcgacttgggaacttccgatatgtggac
cgtccactcaaactagggcagctgagtggcaataggtttaccattgtcttaagggaagtg
acgggaagtgaagaagtcatcaacacagcgctggaatctttgaaaacccacggctttatc
aattattttgggatgcagcgctttgggaccacatccatacccacttataccgtgggaaaa
gaattactgaggggtaatttcaaggaagcaggagagctcattctgcagcccagggcagga
gagaaggagtatttaacacaatgtaggaagagctggtggaaagacaagaactgcatgcag
atgttgagtgctttaccgcggaaatacaacatagagcgggcgctgctagagggcctgatt
aaatacggagagaataactatgccaatgcattccaaatgattcacaggaacacgagaatg
ctgtatatccacggataccagagctacatctggaactgcgttgtgtcacggcgcctcaaa
gagtttggttttaagccagtggtcggtgacctagtttacaaaggagacctgaaagattta
gccactaaggatgaaaatcagccaagcggtgcaaatggaaatactgaagacagtgacaat
agctcacgggtgactccagcagtggtgacagaggagaccctctcccagtacaccatccac
gacgtcctactgcctctcccaggcttcgatgtcctctacccagaaaacaaagttggcatg
tggtacacagagctgttggccgcggacggactgacagtggaaggactgaagaatcccaac
aagcagtatgctctgactggacggtataggaggctgatcgtcctcccgaatgacctgaac
tggcagctctacatgtactcagactataccaagcagttgacccagagtgaccttgatctg
attcaagagaaaccggagccaacatctgatccagatagcactacaaaagcattgaaaatt
gagttgtccctcccccagtcctgctatgctacaatggccttgcgagagattttaaaaata
gacacttcctcagcctatcagattactctgaatcccagcatcaagcctgaccaatcagca
actgcagaggtcgtcacggagacgcaaaatcaacaacagacaagtgacacctag
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