Crassostrea virginica (eastern oyster): 111106025
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Entry
111106025 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111106025
Cilium and associated proteins [BR:
cvn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
111106025
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Gene cluster
GFIT
Motif
Pfam:
IFT57
Laminin_II
DUF745
DUF1664
Motif
Other DBs
NCBI-GeneID:
111106025
NCBI-ProteinID:
XP_022296243
UniProt:
A0A8B8AZQ2
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Position
8:complement(14093422..14095334)
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AA seq
417 aa
AA seq
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MSEEKRRGEDVEDGGPGLVYMPFVIMEEILDKLRLLDYERQFQMKLKMKPISRHYFAIPT
NPGEQFFMFTSICAWLIQKAGRNFEQPQEYDDPNATISSILEELRHFGHSVDFPPSKLKQ
GCGEHCIYVLDKLADEALKSSGFHWEKPNYPEEELEEENIVEDDAELTXNEVEKSIFQNE
MEEEEFEEEEQILDLEGLKRLSQKNQQMEHSKPEEIMESTTDAAAWKLEVERVLPQLKVT
IRKDNKDWRDHVEQMHQHKDGIESSLTETKSYLDKLHDEITRTLEKIGSREKYINNQLEH
LLSEYRAAQDQLSETKERYRQASGGVTDRSRMLADVTEELERVKMEMEDRGSSMTDGAPL
VKIKQAIXNLRKENVQMEIRIGVVEHVLLQAKLKDKTSQNKEVHSNKTQDTFDYNAY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagagaaacgccgtggagaggatgtggaagatggaggacctggtcttgtgtac
atgccgtttgttatcatggaggaaatccttgacaaacttaggctgctcgattacgaaaga
cagtttcaaatgaagttgaaaatgaaaccgatttcgagacattattttgccattccaacg
aatcccggagaacaattcttcatgtttacgtcaatatgtgcatggctcattcagaaggca
gggagaaattttgaacaacctcaggaatacgatgaccccaatgccacaatttctagcatt
ctggaagagctgcgtcattttggccattccgtggactttcctccttcaaaactaaaacaa
gggtgtggggaacactgtatttatgtgctggataaactagcagacgaagctttgaaatct
tcaggatttcattgggaaaaaccaaactacccagaggaggaacttgaagaagaaaatatt
gtcgaagatgatgcagagctcaccntgaacgaagtggagaaatccattttccagaatgaa
atggaagaagaggaatttgaggaagaggaacaaatactggatttggaagggcttaagaga
cttagccagaaaaaccaacaaatggaacattccaaaccagaagaaataatggaatcaacc
actgatgctgctgcctggaaattggaagtagagcgtgtcttaccccaactgaaagtgacc
atacgtaaagacaacaaagactggagagaccacgtagaacagatgcatcaacacaaggat
ggcattgagtcgtcacttacagaaaccaaatcttatctcgacaaactccatgatgaaatc
acccgcacccttgagaaaattggcagtagagaaaaatacatcaataatcaattggaacat
ttgctatcagaatatcgtgctgctcaggaccagctctcagaaacaaaagaaagataccgt
caggctagcggaggggtgactgatcgatcacgcatgttggctgatgtcacagaggaactg
gagcgcgtcaagatggagatggaggaccggggtagtagtatgacggacggggctccactg
gtgaagatcaagcaggccatcnagaacctccgcaaagaaaacgtccagatggaaatccgg
atcggggttgtcgagcatgttttactgcaggcaaaacttaaagataaaacctcgcagaat
aaagaagtacacagtaacaagacacaggacacttttgactacaatgcttattga
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