Crassostrea virginica (eastern oyster): 111106208
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Entry
111106208 CDS
T09197
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111106208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111106208
Spliceosome [BR:
cvn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111106208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
111106208
NCBI-ProteinID:
XP_022296485
UniProt:
A0A8B8AZ99
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Position
8:73253758..73262705
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AA seq
645 aa
AA seq
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MSLSSREWEDLKSLLDKAVHKFLGFTEQSLVTAALNCIDKGYDKKKTIGKLEVFLNDREA
EKFSEKLFDVWEDYRTKSQRKKRKDGDRERDEATEKKKRRFVDDGPVEMPVIPGPGNPSP
GQLTGDKIKEMMANAKSQINERKTQLTAMMPAPPPKPSLGGLSHNEILMNEALEKVRRAQ
ELQAKIQNQMSGLMQGKGGQPPTIPTKPTPLILDAEGRTIDAKTGQTVQLTHYTPTLKAN
IRAKRREQFKGLIEKPPEEMSEGKYFDPRVGARQAQRPKRGFKFHEKGKFETVASRLRAK
AQLEILQSEIAQAAKKTGIASAAKLATIAPKKELREGEIPGVEWWDHYLLPNDSYEGIED
RLTEGNFEGVTHLVEHPIQLKPPNEPEKEPQVPVYLTKKERKKLRRQNRQENQKEVTEKI
RLGLMPPPEPKVRMANLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTTEQ
RRTKKEKKLKEDTTLGVHVSVYRLRDLTNPAKKFKIEANAKQLFMTGIVIMHKECNVVAV
EGGPKQQRKFRRLMLQRIKWNEDKHKKSAKDDDDSDSEEEVDKSNKCVLVWEGTTKQRAF
TDFKFKVCPTEAFAREQFKKCGVEQYWDLAFSGAVLESTQDDDFL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctcaagcagagaatgggaggatctcaaatccttactggacaaggcagttcac
aaattcctgggcttcactgaacaatccctggtcactgccgctctcaactgtattgataaa
ggatatgataaaaagaaaaccatcggtaaattggaggtcttcttaaatgacagagaggca
gaaaaattctcagagaaattgtttgacgtctgggaagattatcgtaccaaaagtcaaagg
aagaagaggaaggatggggacagagagcgagatgaggctacagagaagaagaaacggagg
tttgtggacgacggacctgtggaaatgccggtcattcctggccccggaaacccgagtcct
ggacaacttaccggggacaagatcaaagaaatgatggctaatgccaaatctcagatcaac
gagagaaaaacacagttgactgccatgatgccagcacccccaccaaagccttccttggga
gggttgtctcataacgagatcctgatgaacgaagcattggagaaagttcggagggcccag
gagctgcaggccaagatacagaatcagatgtctggcctgatgcaagggaaagggggacag
cctccaactatccctacaaaaccgacaccgcttattctggatgccgagggtcggacaatc
gacgccaaaacaggacaaactgtccagctgactcactacacacccacccttaaggccaat
atcagagctaagaggagagagcagtttaaaggattgattgagaaaccccccgaggaaatg
agtgagggcaaatactttgatcccagagtcggtgcaaggcaagcacaaaggccaaaaaga
ggcttcaagttccatgagaaagggaagtttgagacggtggcctccaggctgcgtgctaag
gctcaattggaaatcttacaaagtgagattgcacaagctgccaaaaagacaggtattgcc
tctgctgcaaaacttgccactattgcaccaaagaaagaactgagggagggtgagatacca
ggtgtggaatggtgggatcactacctcctgcccaacgacagctacgaggggatcgaggac
aggctgacggaggggaacttcgaaggagtgacacacctggtggaacaccccatacagctc
aaacctcccaacgaaccagaaaaagaaccccaagtaccagtttatctcacaaagaaagaa
cgaaagaaattacggcgacagaatcgacaggaaaatcagaaagaggtcacagagaaaatc
cgtcttggtttgatgcctccgccagaacctaaagtacgcatggcaaacttaatgagagtg
ttaggaactgaggcagtacaggaccctacaaaagtggaggctcatgtcagggcacagatg
gcaaagagacaaaaggctcatgaggaagctaatgcggctcgtaaactgaccacagaacag
agacggacgaaaaaggagaagaaactgaaagaggataccacacttggggtacatgtgtcc
gtgtacaggttaagagatctgacaaatccagcaaagaagttcaagatcgaggccaacgcc
aagcagctgttcatgacggggatcgtcatcatgcacaaagagtgtaacgtggtggctgta
gagggtgggcctaaacaacagaggaaattcaggcggctgatgctgcaaagaattaagtgg
aatgaggacaagcacaaaaagtccgctaaggatgatgatgacagtgattcagaagaagaa
gtggacaaatccaacaaatgtgttctagtttgggagggcaccaccaaacagagagctttc
acagattttaaatttaaagtgtgccccacagaagcatttgctcgggagcagttcaagaag
tgtggagtggagcaatactgggacttagcattcagtggggccgtgttagaatccacacag
gatgatgacttcttatag
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