Crassostrea virginica (eastern oyster): 111106985
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Entry
111106985 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-2-like
KO
K06761
contactin 3/4/5/6
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvn04515
]
111106985
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cvn00537
]
111106985
Cell adhesion molecules [BR:
cvn04515
]
Immunoglobulin superfamily
Contactins
111106985
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cvn00537
]
Others
111106985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
fn3
7tm_1
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Interfer-bind
Pur_ac_phosph_N
NDNF
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
111106985
NCBI-ProteinID:
XP_022297614
UniProt:
A0A8B8B4M9
LinkDB
All DBs
Position
8:64701288..64720000
Genome browser
AA seq
1365 aa
AA seq
DB search
MGERNFSDISYIYEYYSRALISNSVFAVVGGLIGVIGNIVIIVFYFLKWRGHEERYFIPV
LAFVDCLACISGGCLYVLSNLYWLHFPSDILCRLLYFIHVFISAVSGHIILAISVQRYLL
ICRPYGPYLTLNRKRTGLVVINVVAFLYSFPVLQISGNAVTQETYRGKAVVYEECFFVAN
NTPIHGVYTYILLVITLANIIAVIAVYSPFIRKYRRVISMRNSDNHSTSSSNVEFPRQRL
NTGASRTTEISHDLAHVTESHVTHEVANDMSNPNRHFESNEQIVRTVTNRKRRLVTRMSH
MFSVIIIFYMLSYFPSLVIHFIVLFYIDGQYLWAKEDGSIKHSXVCEILKSESFRIIQNA
RTSVTYGTNYPDEESAPKGPKFYLYPTDTEILGSTPEVYLECAATGFHSPHINGCLTREX
GQTEALVGTRYIVTNGRVSIINPKVTQDGGSYQCRAQNEFGAVLTQPVALSFADLGEFSN
VDRAPIRPSEYQGTVIQCPKITSTSSLAISYNWIKDQTKAINSRLTPYIFISGDGQLYFS
EVTRGDNGMYYCMATLTNPTNRDNYIGSFQSPSRISTGIPLQVLGAPSGILSVQIPDSFI
QVFPRQPVVGXDAKLECFAYGSGPLVYFWHLPTLRDPGSRMRFSDSNRVLTIQGVTPQDE
GIYTCVCSSRRSGTRDQKTFYLHVEAKPIFTIPLMDQHADLDSELVWRCQAYGIPRPMYT
WYRDGQLLSGGGGVTLTGNTLTIPRVXGGQAGMYQCMASNTHGTATSTAQLRVLAFPPSF
TKHPLESTTLGSLGGSLTVLCHPEAAPRPNITWLQDGRIVSGXESGSPAHLQPLTNGHLR
IVNLSSSDQGIYTCKAVNELGTAESSTTLTVLDRTVLVEQPVDVTVVVNGTALLFCRASY
SPSLELVYTWFFNDQKVDFDQNVHFQMRSRYSGDIYIVGVQFRHAGVYTCTATTGLDSIS
ASAALSVRGPPGEPTGVHVVKKQSALDPYIVQLAWQDGAVNGRPISHFSIFAKSNHSDSQ
WKMIMNAPLNSVTVELTWRLVLVHHLSPGSSYWFKVQASNEYGAGPLSSPSGEHLIPGAA
PFKAPGNIRRGKGKVGSLHIVWEPLSPEEQNGWGIGYIVEWRLPRQDTRTENMWEKRLLP
GNVSEFVTTIPGRDQYYVQYEVRLTAFNMFGVGRPSPVQYIHSADDIPVAVPSMVWVEAY
NSTALMVHWTPVPNTRESMKGMLRGYKVNYWLRYGEDENQAIQATLAGQREQALVIGLLP
DTWYYVSVQVYNDAGNGQKSEKYPQETFRRAPHMYPTQVKVHSYSSDSVKVTFRGVATTA
EEEPLQGYKIRVWETSDNLRKAYDIDVGRAVSGIVTGSRDTRSTR
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaagaaacttctcggacattagttatatatatgaatactacagtcgagctttg
atttcaaacagtgtttttgctgtagtcggtggtctcattggagttattggaaacattgtg
ataatcgttttctatttcctgaaatggcgaggacacgaggagagatattttattcctgtt
ctggccttcgtggattgtttggcgtgtatatccggtggatgtctgtatgttttgtccaat
ttgtattggttacatttccccagtgatattttgtgtcgtctgctgtacttcatccacgtg
tttatatcagcagtatccggccacatcattctcgcgatatccgttcagcgatatctactg
atctgtaggccttatggtccttatctgacattgaaccggaaaagaaccggtctagtcgtc
atcaacgttgttgcatttctgtactcgtttccggttcttcagatttccggaaatgcagta
acccaagaaacttatcggggaaaggcagtggtttatgaagaatgcttttttgtcgcaaac
aataccccgatccatggtgtgtatacctacatcctcctcgtgataacccttgcaaatatt
atcgctgtaatcgcagtgtacagtcccttcatacgcaaataccgtcgcgtcatttccatg
agaaattcggacaaccacagtaccagctctagtaatgttgaatttccgcggcaaagactc
aacacaggagcaagccggaccacggagatttcccacgacctggcacacgtgacagaatct
cacgtgacacatgaagtagcaaacgacatgtcaaacccaaaccgccattttgaatccaat
gaacaaatcgtacgaactgttacaaaccggaaacggagactggtaacccggatgtctcat
atgttttccgttatcataatcttttatatgctttcctatttcccctctcttgttattcat
ttcattgttttgttctatatagatggtcagtacttgtgggccaaggaggatggcagcata
aaacacagcnttgtttgtgaaattcttaaaagtgaatccttcagaatcatacagaatgca
aggacttcagtgacatacggtacaaattatcccgatgaggaatcagcacccaaaggacct
aaattctacctgtacccaacagacacagaaatccttggatccacccctgaagtttacctt
gagtgtgccgccactggattccacagcccacatatcaatggatgtttaacaagagagnnt
gggcagactgaggccctggtgggcacacgatatatcgtgaccaatgggcgagtgagcatc
atcaatcctaaagtcactcaagatggaggaagttaccaatgcagagcacagaatgaattt
ggagctgttcttacacagcctgttgcattgtcttttgcagatttgggagaattttccaat
gtagacagggcccccattcgaccgtcggagtatcagggaacagtgatacaatgtcctaag
attacttcaacttccagtttggctattagctacaactggatcaaggaccaaacaaaagcc
atcaattcccgtctgactccatacatctttatttcgggcgatgggcagctttatttctcg
gaggtgacaaggggagataatggcatgtactactgcatggcaaccttgacaaacccgacc
aaccgtgacaactacatcgggtcattccagtcccccagcagaatcagcacggggattccc
ctacaggttctaggggctccttcaggaatattgagtgttcagattccagacagctttatt
caagtgtttccaaggcaaccagtggtgggtnctgatgctaaattggagtgttttgcgtat
ggaagtggtcctttggtttatttttggcatctccccaccctgagggaccctggcagcagg
atgaggttctcggacagtaaccgggtgctgaccatccagggggtgaccccccaggacgag
gggatctacacctgtgtctgcagcagtcgccggtcaggcaccagggaccagaaaaccttc
tacctgcatgtggaagcaaaacctattttcaccattcccctgatggaccagcatgctgac
cttgattctgagctggtctggagatgtcaggcctatggaatcccccgtcccatgtacacc
tggtacagggacggccagctactgtccgggggcggtggagtgaccctaacggggaacacc
ctcaccatccctcgggtcncagggggccaggcggggatgtaccagtgtatggccagtaac
acccacggcacggctaccagcactgcccagctcagggtcctagcttttccaccgtccttt
accaaacaccccttggaatccaccactcttggatcactgggaggatccctgaccgttctg
tgtcaccctgaagcagcgccgcgccccaacatcacctggctgcaagacggcaggatagtt
tccgggnaggagagtggctcacctgcccacctccagccgctgaccaatggacacctgagg
atcgttaacctgagctcctctgaccagggaatctacacctgtaaggctgttaatgagctg
gggacagcagagagttccaccactctgactgttttagacaggacagttttggtggagcaa
cctgtagatgttacagtggtggtaaatggaacagccctgctgttctgtcgagcttcttac
agccccagtctagaactcgtctatacctggttcttcaatgaccagaaagtggactttgac
caaaatgttcatttccagatgagaagtcgttattctggggacatttacattgtgggagta
cagttcagacacgcgggggtctacacctgtactgcaaccacagggctggactcgatcagt
gcatcagctgcattgtcagtccgaggaccccctggtgaacccactggagttcatgttgtc
aagaagcaatctgccctcgatccatacatcgttcaactggcctggcaagatggggccgtc
aacgggcgaccaatttcacacttctccatatttgctaaatctaatcactcagacagccaa
tggaagatgattatgaatgcacccctgaactctgtgactgtggaactgacctggaggttg
gttctggttcatcatttgagtccaggatcctcctactggtttaaggtccaagccagcaat
gagtacggagcaggtcccttaagttccccctctggggagcatctgattccgggagcagcc
ccttttaaggctccaggaaatataagaagagggaaaggaaaagtgggcagtctccatatt
gtgtgggagcccctctccccagaggaacagaatggctgggggataggttacattgtggaa
tggagacttccaagacaggacactcgcacagaaaacatgtgggaaaaaagactcctgcct
ggtaacgtcagtgagtttgtgaccaccatccctggccgagaccagtactacgtccagtac
gaggtcaggctgacggcctttaacatgtttggggtggggagaccctctcccgtacagtac
atccactccgctgatgacatccctgtggcagttcccagcatggtgtgggttgaggcctat
aacagcaccgcccttatggttcactggaccccggtaccaaataccagagagagtatgaaa
ggcatgctcaggggctacaaggtaaactactggcttcggtacggggaggatgagaaccaa
gccattcaggccaccctggcaggacaaagggagcaggccttggtgatcggtctcctccca
gacacctggtactacgtctccgtccaggtgtacaatgatgcaggcaacggtcagaagagc
gagaagtacccacaggaaacattcagaagagcaccccacatgtaccccactcaggtcaaa
gttcactcctatagttctgactcggtcaaggtcactttccgtggtgtcgccaccacagca
gaggaagaaccactccagggatacaagattcgagtttgggagacatcggataacttgaga
aaggcctatgacattgacgtgggccgggctgtgagtggtatagtgacgggatcaagagac
actcggtctacaagatga
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