Crassostrea virginica (eastern oyster): 111107149
Help
Entry
111107149 CDS
T09197
Name
(RefSeq) peregrin-like isoform X1
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111107149
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
111107149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
PHD_NSD
DUF7069
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
111107149
NCBI-ProteinID:
XP_022297877
UniProt:
A0A8B8B385
LinkDB
All DBs
Position
8:complement(31016368..31028739)
Genome browser
AA seq
1509 aa
AA seq
DB search
MVYDFDVKEFCQNLKATKPPYECPVRSCGKVYKSYCGIQFHLYNFDHDNPENNSPSPGKK
PGKKKTKWGHHRAMRRSPTPPEFVVPPRRETLTYAEAQRLVEIDLEGRLHRINIYEPLEI
ITQDEIDNHKNTEKEEKAEKTPLKAKNCENQKSRKEVPASAQHTIKLPEANYKVIDDYIK
PNKISQRQNSYYRYIEKSSEELDEEVEYDMDEEDHAWLEILNKGRKEDGISQVKQEDFEL
LMDRFEKEAFFQSQTSGKDPGPSIDEDAVCNICQDGECQNSNVILFCDMCNLAVHQECYG
VPYIPEGQWLCRRCLQSPSRAVDCCLCPNKGGAFKQTDDGRWAHVVCALWIPEVGFANTV
FLEPIDSFDNIPPARWKLSCYICKQRGKGACIQCHKTNCYTAFHVTCAQQAGLYMKIEPI
KESSANGLTVSVRKTVYCDVHTPADSDCTPCLTGGDSSDDDNKSASAKKAKEKSKLKMKK
ARKILAEKRNALPVVSIPIIPQSRLSKIANLISLPKKQPFLTKLLSYWTLKRQSRNGVPL
LRRLQSNHMTRNKHETKNDKQSNALKEQLKYWQRLRQDLEKARLLVELIRKREKLKREQL
KVHQMAMELQLQPFAVLLRSTLEQLVEKDTSNFFTEPVSLDEVPDYLDYIDKPMDFETMR
KNIDNHQYRTMDEFETDFEQIIKNCMKYNAKDTVFYRAATRLRDQGGAVIRNSRRTAERV
GYDPATGLHMEQVPTVPEPVVLEDVDNFLEDTKEGMPLEEQLRILLDKMDVANASRKPGK
SKLARRIRKEIVKVRRKLAIQKGQHVSDIEDTADTASDINEDSAHEDGPDLSATPKSSKS
EKSSSKGSKETPTRGRGRGRGRGQVGRPRKSRNDSESESPLVGARIEKRRSSDSSRTTES
SSTSSKDSNSSHQAHSGVNRRTSVLFGKKNFRSSKNDSSAPSSPGTPTQPSTPPRRNSKG
GRSSKQKGDHMDSPQPPVLEPMTSGRSSSRGPASPKSPGVRKRSASAITSPDRESRPTPP
KRTTSLSEPLSFADPPDITKRDSFRYYRGPDNLRSSSESDSTSVISSSDESLTDSSLGSS
SSNSRSEINSNGLPKLSEEGTESDSSTSPAARHQAESSKLLSSDVLLRTSVTNTPACSRT
SLPASSHAKLACQPDCIEIFLSDRCDRALSLATANQGSHLLENVMGVQSYNLRSHKKTRS
NRSSKWTDKEETTHAGLSKKMKAGHRKVGKVTRKLKSVSCRNSCQKSLLTSELDLHVSGI
TKKSRSLKSRVAQLAKKRQDSPDLKTEQKQRLKKVEEKSSLKLDNSPEQTWVLSQLVYIK
DSKLRPRTPSCDSTDSHSTNSLPPHTDTTQSSANKANVDQGRAHRSGSCDSEDLIPLEPL
DLVWAKCRGYPWYPALIINPKMPKTGYFHNGVPIPVPPDDVLALQRKYDEPVYLILFFDT
KRTWQWLPRNKLEPLGVDSGLDKAKLLENKKPNVRKAVQKAYEKAILHRCSVTGEPNPLS
GDSELEDQD
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggtgtatgattttgatgtgaaggaattctgccaaaacttgaaggcaaccaaaccgccc
tatgaatgtccagtaagatcatgtggcaaagtctacaagagctattgtggaattcagttt
cacttgtacaactttgatcatgataatcctgaaaacaattctccctcaccgggaaagaaa
ccaggaaagaagaagacgaaatggggtcaccaccgagcaatgcgacgttccccaacaccc
cccgagtttgttgttcccccgcgtagagagactcttacctacgctgaggcccaaaggctt
gtagaaattgatttagaaggaagacttcacagaataaatatatatgaaccgcttgaaatc
atcacacaagatgaaatcgacaaccataagaatacagaaaaagaagaaaaggcggaaaaa
acgcctctaaaagctaaaaattgtgaaaatcagaaatcgaggaaggaggttccagcttca
gctcagcataccattaaactgccagaggctaattacaaagtcatcgatgattacatcaag
cccaacaagatttcccagagacagaactcgtactatcgttacatagaaaagtcctcagaa
gaactagatgaggaagtggagtatgacatggatgaagaggaccatgcttggttagaaatt
ctgaacaaaggtcggaaggaggatggcatttctcaggtcaaacaggaggattttgagtta
ctgatggacagatttgaaaaagaggctttcttccaaagtcagacatctggcaaggatcca
gggccatccattgatgaggatgcagtgtgcaatatttgtcaagatggagagtgtcagaac
agcaatgtgattttattttgtgacatgtgtaacttagctgtgcatcaggagtgctacggt
gtgccgtacattcccgagggacagtggttgtgtaggcgatgtctacagtcgccctcgcga
gccgtggactgctgtctgtgtccaaacaaaggaggggcattcaaacagaccgatgatggt
cgctgggcacatgttgtgtgtgccttgtggattcctgaagtaggatttgctaatactgtg
tttttagaaccaatagacagttttgacaatattccccctgcaaggtggaaattatcctgt
tacatttgtaagcaacgaggtaaaggggcatgcattcagtgtcacaaaacaaactgttat
acagcttttcatgttacctgtgcacaacaggcaggcttgtacatgaaaattgaacctatt
aaagagtctagtgctaatggattgacagtgagtgttagaaagactgtttattgtgacgtt
cacacgccagcagattccgactgtaccccctgtctaacaggtggcgacagttcggacgat
gataacaaatcggcctccgcaaaaaaggccaaggagaagtccaagctgaagatgaagaaa
gctcgtaaaatcctcgcagaaaaacgcaacgctcttccagttgtttcaataccaattatt
ccccagtctaggttgtccaaaatagccaacttgatcagtttacccaagaagcagccgttc
ctgactaagctgttaagttactggacgctcaagaggcagtccagaaatggtgttcctctg
ctgcgaagactccagtcaaaccatatgacaaggaacaaacatgagaccaaaaacgacaag
cagagtaatgccctgaaggagcagctgaagtactggcagcgcctacggcaggacctggag
aaggcgaggctgctggtcgagttgatcaggaagagggaaaagctgaagcgggagcagctg
aaggtccaccagatggctatggagctccagctgcagccctttgctgtcttgttgcgatcc
acactagagcagctcgtggagaaagacacttccaatttcttcacggaaccagtgtcgtta
gatgaggttccagattacctggactatattgacaaaccaatggactttgagaccatgcgc
aaaaacattgacaatcatcaatatcgcacaatggatgagtttgagacagactttgaacag
atcatcaagaattgtatgaagtacaatgccaaagacacagttttctatcgagcagccaca
agacttcgagatcaggggggtgcagttattcggaactcgcgtcggacggccgagagagtg
ggctacgatccagctacagggctacacatggaacaggtccccactgtacccgagccagtt
gtcctagaagatgttgacaatttcttggaggatacaaaagagggaatgcctcttgaagaa
caattgaggatattgttggacaaaatggacgtggcaaatgcttcaagaaaacctggtaaa
tctaagctcgccagaagaattcgaaaggaaattgtcaaggtgcggaggaagttggctatc
cagaaaggccagcatgtcagtgatatagaggatacagctgacacagcatccgatattaat
gaagattcagcacatgaagatggcccagatctctctgcaactccaaagtcgagtaaatca
gaaaagtcctcctccaaaggatctaaagaaactccaactagagggaggggcagaggaagg
gggcggggccaagtcggacgacccagaaagtctcgcaacgactcggaaagcgagtctcct
cttgttggagctaggattgagaagagaaggtcatctgacagttcccgaactacagagtcc
tctagcacttcctccaaggacagtaactcctcccatcaagcccacagtggagtcaatcgg
cgcacatctgtattatttggcaagaagaacttccgcagcagcaagaacgacagttctgct
cccagtagtccaggaacacccactcagccctcaaccccaccgcgacggaattctaaaggg
gggcgcagctccaagcagaaaggggaccacatggactccccccagccccccgtgctggag
ccgatgacgtcgggacggtcctcctcgcggggaccagctagtccaaaaagtcccggtgtc
cgtaaacgctcagccagtgcaataacctctcccgaccgcgaatccagacctaccccaccg
aagagaaccacctccctcagtgaacctctgtcgttcgctgacccacccgacatcacaaag
agggacagtttccgttactaccgaggtccagataatctccggagttcgtcggagtcggac
agcacttctgtaattagctccagtgacgaatcgttaacagacagctctcttgggagttca
agttccaacagtcgctcagaaataaattcaaacggactccctaagttatctgaggaggga
acggagagtgattcctccacctcccccgctgcacgccaccaggctgagtcatctaagctc
ttaagtagtgatgtattgctgcggacctctgtcactaacacacctgcatgctcccgcacc
tctctccccgcttcttcgcatgccaagcttgcgtgtcaaccagattgtatagagatattt
ctatctgatcgctgtgacagggctttaagcctggctacagcgaatcaggggtctcatttg
ctagaaaatgttatgggggttcaatcctataaccttaggtcgcacaaaaaaacccgctca
aacagaagttcaaaatggactgataaggaggaaacaacccatgcgggcctgtcgaagaaa
atgaaagctggacacagaaaagttgggaaagtcacgaggaagttaaaatcagtatcttgt
agaaattcatgtcagaaaagtttgttaacatccgaattagacttgcacgtttctggtatt
accaaaaagtcaagatctctaaaatcaagagtggctcagttggcaaagaaaagacaagat
tctccagatttgaagactgagcaaaaacaaagattaaagaaagtggaagaaaaaagtagt
ttgaaattagacaattcaccagaacagacgtgggtattgtcccagcttgtctatatcaag
gacagtaagttgcggcctcgaacaccgtcctgtgactctacagactctcacagcaccaat
tcactccctccccacactgacaccactcaatcgagtgctaacaaagccaatgtagaccaa
ggtcgcgcccatcgcagtggaagctgtgattccgaggaccttatccctttggagcccctt
gacctagtttgggcaaagtgtcgaggatacccatggtacccagccttgataataaatccg
aaaatgccaaagactggttactttcacaatggcgttccgatccctgtgcctccagacgat
gtgctggccctacagaggaagtatgacgagcctgtctacctcatcctcttcttcgacacc
aaacgcacgtggcaatggttacccagaaacaaactggaacctttgggagtggactcaggc
ctagacaaagctaaactgttggagaataagaaacctaatgtcaggaaggctgtacagaag
gcgtacgagaaggcaatcctccaccgctgtagcgtgaccggcgaacccaacccactctcc
ggggactccgagttagaggatcaggactga
DBGET
integrated database retrieval system