Crassostrea virginica (eastern oyster): 111107158
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Entry
111107158 CDS
T09197
Name
(RefSeq) vitamin D3 receptor-like
KO
K08533
RAR-related orphan receptor beta
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111107158
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvn03310
]
111107158
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111107158
Nuclear receptors [BR:
cvn03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
111107158
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111107158
NCBI-ProteinID:
XP_022297902
UniProt:
A0A8B8B499
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Position
8:complement(19527073..19537153)
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AA seq
551 aa
AA seq
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MSDNSKPSVKWKVSKRLGRKREKYLPDSLPLLLPPCKICGKKASGIHYGLNTCEACKGFF
RRYLKRKEPYVCEKGGNCDLNIKAKGPHCSACRMKKCLRLGMSKEGVRQGRYTLTERTKR
ILEFKCQQQSSSYDWSSSEWGNYSHSDRNCNNKQTGSLEIHRNSGYNPDHFVKKEKNSDD
LEKFVKTKGSSCYNSDDSVTALYDSGKNSGDLSPFSPSNMNLLSKHYPDSFDNSCSKHSL
LHELSSLTSHEVDCPNECSSAELSPLENSKWADPDKKRELSTDVQEVLTVLTKAYKHLQH
ITQGMSDDEIRKRLEIGYAGHQDKVNLFGRLDPIPTKDYNEIYQKTNLDVDSRTENSSQR
REEFGMAMADYVAFSNEIPGFNELSAKDKATLVKASRLDFFLTLEYRAKDPETEMMISYS
GRAVHISDACAYLPQDMLRSWWRMTYDLRKLQLTTEEHALLLALCLMSTDRCKLDCPESV
EKIEAVLVKACMSLLQRRYKERAGQQFSAFVSLLTKLRGISEEYHATYRKICEDTVLITR
APELLSMLFDE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaactccaagccttcggtcaagtggaaagtcagcaagcggctgggcaggaag
cgagagaagtacctccccgacagcctgcccctcctcctgcccccctgcaagatctgcggg
aaaaaggcctcggggatacactatgggttgaacacgtgtgaagcatgcaaggggttcttc
agaagatatttaaaaagaaaagagccatatgtgtgtgaaaagggaggaaactgtgatcta
aacatcaaggctaaaggcccccactgctcagcgtgtcgaatgaagaaatgtctgaggctc
ggaatgtccaaagaaggagtcagacaaggccgctacactttgacagagagaacaaagcgg
atactggagtttaaatgtcagcagcagtccagtagttacgattggagcagcagtgagtgg
gggaactactctcactcagacaggaactgtaataacaaacaaactggatccctggaaatc
cacaggaattccggatataatccagaccattttgtgaaaaaggaaaaaaactctgatgat
ctggaaaaatttgtaaaaaccaaaggaagttcttgctataattctgatgattctgtgact
gccttatatgacagtggaaagaattcaggtgacttgagccccttttcccccagtaatatg
aatctactaagcaagcattacccagactcgtttgacaacagctgttctaaacattcccta
ttgcatgaactgtccagtttaacgtctcatgaggtcgactgtcctaatgaatgtagcagt
gcagagttatctcccttggaaaattcaaagtgggctgaccctgacaaaaaaagggagttg
tctacagatgttcaggaagtgttaacagtgctgacaaaggcttataaacatttacagcac
attacgcagggtatgagtgatgatgaaatcaggaaaagactagaaataggttatgcgggc
catcaagacaaagtcaacctctttgggaggctggatcccatcccgaccaaagactacaat
gagatataccagaagacaaatttagatgtggacagtcgaacagaaaattccagccaaaga
cgggaggagttcggtatggccatggcggactatgtagctttcagtaatgagattccagga
tttaatgaactttcagccaaggataaagcaaccttagtgaaagcttctcgattggatttt
tttctaaccctcgagtacagagccaaagatccggagactgagatgatgatctcgtactcg
ggtcgagccgtccacatttctgatgcctgtgcataccttccacaagacatgctgagatct
tggtggagaatgacctatgacctccgtaaacttcagctgaccaccgaggaacatgccctt
ttactggctctgtgtctaatgtcaacagatcgttgtaagcttgactgccccgagtctgta
gagaagatagaagccgtgcttgtcaaagcctgcatgtcactgctacaaaggcggtataag
gagcgagcaggacagcagttctcagcgtttgtcagcctcctgacgaagcttcgcggaatc
agcgaagagtaccatgccacgtatcgtaaaatttgtgaggacacggttcttattactagg
gcaccagaacttctcagtatgctgtttgacgaatga
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