Crassostrea virginica (eastern oyster): 111107474
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Entry
111107474 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111107474
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvn02000
]
111107474
Transporters [BR:
cvn02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111107474
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
ACT_13
AAA_21
DrrA1-3_C
Motif
Other DBs
NCBI-GeneID:
111107474
NCBI-ProteinID:
XP_022298399
UniProt:
A0A8B8B6Q6
LinkDB
All DBs
Position
8:complement(3209975..3222235)
Genome browser
AA seq
1497 aa
AA seq
DB search
MMDFHRQATIALAAFQNGWLGRQFILLLWKNWXFQKRKVCVTVFEIVMPIVFAVILVCIR
LIAKKRNRSMKLMGLNSSIYWVSWLVKSSLYWCLFCXVYCILFSIEVSDKGKXISQKDPS
LFFVFLLCYSVSIICFCFMISTFFNKANSAAFASGIGFLLYICALLLPSKXYETMXKSEK
LGICILNNMGMAFGINTIGLYEGTGYGAQWDNFSKPATIDDNFSLLDAMLMLIGSSGVYL
VITWYVDGVFPGEYGVPLPWYFPLSKTYWCGSKQKSSTMSDTGKLDPKYFERDPNALSVG
ISINHLRKEFGSGXKKKIAVADTTLNIFEGQXTALLGHNGXGKTTTMSMLTGFLPPTXWY
ATVNGYDISEDIQNVRRSLGLCPQHNILFDTLTVKEHLEFFAQMKWLSKENVKREVDDMI
NVLXLEPKRNSFSMTLSGGQKRKLSVGIALIAGSKVVILDEXTSGMDPAARRQTWEILQK
FREGRTMILSTHXMDEADLLGDRIAIMAEGVVSAVXNILFLKKLYGAGYHLVMVKDKDCD
VKAVTNVIQQHIPAAELESEISAELSYLLPFDESKKFEQLFNEIESRKSELKLTSFGTTA
TTMEEVFLKVGESSLRTEEEMFSSSKSFTGHDNKGYGSTNNISNGISNGATKENENGLKN
SASTLAIQQFFSMFIRXADPHWRNRTVTLVQLLVPVIFTIFALTVXETLPKQEDEPSLSL
NLKDFPNSVAVYTSASSFPQSIGMSNDYANAILSKGYQVSKYDQTPNDFDSFIIDTTEVG
QAIFKRNYIIGSNFDIQSAAAGNITSYFNGDPLHASAISLTXHMDALLKHYTDSSHSIKA
TNFPFPRPLDDSSRGIGYATRGTGFTIAFCMLFGLAFLSTSFIIFLIKEKITGAKHLQKV
SGVSSYAYWMSNLVWDLLNYQIPILLIMVCFAAFQTQAYTGDNRLGLIYAMFFLYGWACM
PFVYIFYYLFKTPASGMVAGSLLNILTGLATIMAVFTLRVPDLGISSDISDTFDWLFTIF
LPNYCLGQTLMNMYVNYEYIDTCTKLNYEFICALPNRQLNXCCREICTENCLIFDKNYLA
WEIPGVGKYFVFMAAQGFFYMILVFLVEFGVISRIRYLICNXGTHCSFFRDQCNDAIPED
DDVENERRRVNKTSIDSLLKTDSLLLKNLSKSYGSYTAVRGVCVGIPQQECFGLLGQNGA
GKTSTFKMLTGDEIVTGGNAYLNGYDVKSDLKLVQQNLGYCPQFDALIDQMTGXETLTMY
ARLRGIQEQQIKGVVNELLEIMMLRKYADRQCGTYSGGNKRKLSTAIALIGDPPFILLDE
PTTGMDPAARRQLWNVLSQVRASGRTLILTSHSMEECDALCTKIVIMVNGRFVCFGSPQH
LKNKFGHGYTLIARLGQSKDGTTASSEPLKNFVKSTFPNSTIFDDHQGYVHFQIPDNNIA
LGKVFGEMERAKSKYDIEDYSVHQTTLEQVFLSFTRHQEAPSVPEDKKRLCCCCSCC
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttcaccgacaggctacaatcgcgttggctgcttttcaaaatggctggctt
ggaaggcagtttattttacttttatggaagaactggnnctttcagaaaagaaaagtatgt
gtgacggtttttgaaatcgtgatgcccattgtgtttgctgtgattcttgtctgcattcgc
ctgatagccaaaaaacgaaacagatccatgaagcttatgggactgaactcctccatatac
tgggtttcctggctggtgaagagttctttgtattggtgcttgttctgcnnggtctactgt
attctgttctccattgaagtctcggacaagggcaagnntattagccaaaaggatccgtct
ctattcttcgtcttcttgctgtgttactcggtctccatcatctgtttttgtttcatgatc
agcacattcttcaacaaagcaaattcggcggcttttgccagtggaatcggctttcttctg
tacatatgtgccctacttcttccttcaaagtagtatgagaccatgntcaaatcggagaaa
ctcggcatttgcatacttaacaatatggggatggcgtttgggatcaataccatcggttta
tatgaaggaacaggttatggtgcgcagtgggataacttctccaagcctgccactattgac
gacaatttttcattgctggacgccatgctgatgttaataggttccagtggcgtatatctg
gtgatcacgtggtatgtcgatggcgtctttccaggagaatacggagttccattaccgtgg
tatttcccactatcgaaaacttattggtgtggttcaaaacaaaaatcatcaacaatgagt
gatactggaaaactggaccccaagtattttgagagagaccccaacgctttatccgtagga
attagcattaatcacctaagaaaggaatttggaagcgganggaaaaagaaaatagctgta
gcagacaccacgcttaacattttcgaaggtcaantcactgctctacttggtcacaatggg
nctggcaaaacaaccacaatgtccatgttgacagggtttttgcctccaactnnctggtat
gctactgtcaatggttacgacatttctgaagacatacagaatgtgcgaagaagcctagga
ctgtgtcctcagcataacatcctctttgacacactaactgtaaaagaacacctagagttc
tttgctcagatgaaatggttgtccaaagagaatgtcaagagagaggttgatgacatgatt
aacgttctgngactagaacctaaaagaaacagcttttctatgacgttatctggtggtcaa
aaacgaaaactctctgtcggaatagcacttattgcaggatcaaaggttgtaatcttggat
gaancaacatctggtatggatccagccgctcggcgccaaacttgggaaattctgcagaaa
ttcagggaaggcagaaccatgatactctccactcatnttatggacgaagcagatctactt
ggcgaccgcattgcgataatggcagaaggagtcgttagtgctgtgnngaacatcttattt
ctaaagaagctctacggagctgggtatcatcttgttatggtcaaagacaaggattgtgac
gttaaagccgtaacaaacgtcatccaacaacacattcctgcggctgaactggagagcgaa
ataagcgccgagctgtcatatcttttaccttttgacgaatccaagaaatttgagcagtta
tttaatgaaatcgagagcaggaaatcagaacttaaactgacaagctttggaacgactgcg
acaacgatggaggaagttttcttgaaagttggagaaagcagtctgagaacagaggaggaa
atgttctcttcttcgaagtccttcacaggtcacgataataaaggttatggtagtaccaat
aatatttcaaacggaatcagcaatggagccacgaaggaaaacgaaaatggccttaaaaac
tctgcctcaactttagccatacaacagttttttagcatgtttataagannagctgatcca
cactggcgtaacagaacagtgaccctggttcagctgcttgtgcccgtgatatttacaata
tttgctctgacagtcngagaaactctaccaaaacaggaggacgaaccttctttgtccttg
aatttaaaagattttcccaatagcgttgcagtgtacacgtctgcgtcgtcttttccacaa
agcataggcatgtccaacgactacgcaaatgcaattctgtctaaaggataccaagtttca
aaatatgaccaaacaccgaatgatttcgatagttttataattgacactaccgaagtgggg
caagcaattttcaagcgaaattacatcattggaagtaattttgatatacagagtgctgca
gctggcaacataacatcatatttcaatggagatccgttgcatgcaagtgcaattagttta
accnaacacatggacgcattgctgaaacattatacggatagttcacactccatcaaagca
actaactttccattcccacgaccactggatgattctagtagagggataggttatgccaca
agaggaaccggcttcacgattgctttttgtatgctgttcggattagcattcctgtcaaca
agttttattattttcttgataaaagaaaaaataactggtgccaaacaccttcagaaggtg
agcggagtcagctcctatgcctactggatgtctaaccttgtgtgggatctcctcaactac
cagattcctattcttttgatcatggtttgcttcgcagctttccagacccaggcatacaca
ggcgataatcgccttggacttatctacgccatgtttttcctgtatggttgggcctgcatg
ccgtttgtgtatattttttactatctgtttaagacaccagcgtcaggaatggttgccggg
agtctcctcaatattctgacaggtcttgcaacaatcatggccgtttttactctgcgcgtc
ccagatcttggtatttcatctgacatatcggacacgtttgactggctcttcactatattc
ctacctaactactgtcttgggcaaactttgatgaatatgtacgtgaattatgaatacata
gacacgtgtacaaagctgaactacgagttcatatgtgctttgccaaaccgccaattaaat
ncgtgttgtagagaaatatgcaccgaaaattgtttaatcttcgacaagaactacctcgct
tgggagattccaggagttggaaaatacttcgttttcatggctgcacaaggatttttctac
atgatcttagtattccttgtggaatttggtgtcatcagtcgtatccgctatttgatttgc
aatncgggaacccattgcagtttctttcgagaccagtgtaatgacgccatccccgaagac
gatgacgtagaaaacgaaaggcgtcgtgtcaataagacgtccatcgatagtctcttaaag
accgattcccttcttctgaagaatctcagcaagtcgtacgggtcttacacagctgtgaga
ggggtttgtgtcggaatacctcaacaggaatgctttggactgctgggacagaatggagcg
gggaaaacatctactttcaaaatgcttacaggagatgagattgtcaccggcgggaatgca
tacctgaacggatatgatgtcaaatctgacctgaaactggtgcagcaaaacctaggatat
tgtccgcagtttgatgccttgatagaccagatgactggcngagagactctgacgatgtat
gcaagattgagggggatccaagaacaacaaattaaaggcgtggtgaacgagttgctggaa
atcatgatgcttagaaaatatgcagatagacaatgtggtacatacagcggtggaaacaaa
agaaaactaagtactgccatagcattgattggagatccaccattcattcttcttgacgaa
ccgactaccggaatggatccagccgcaagacgtcaactttggaatgttctctcacaggtt
cgcgctagtggaaggacacttatccttacatctcatagcatggaggaatgtgacgcttta
tgtacaaaaattgtgatcatggtaaacggaagatttgtctgctttggaagcccccagcat
ctcaaaaacaaattcggacatggatataccctgattgcaagactaggacaatcaaaggac
ggtaccaccgcttcatcggaacccctcaaaaactttgttaaatccacatttccgaatagc
acaattttcgatgatcatcaaggctacgtacattttcaaattcccgataacaacatagca
cttggaaaggtgtttggggaaatggaaagggcgaaatcgaaatatgacattgaagattat
tctgtgcatcagacaactttagaacaagtatttttgagctttacgcggcaccaagaggcc
ccttctgtgccagaggacaaaaagagactatgttgttgttgtagttgctgttga
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