Crassostrea virginica (eastern oyster): 111107842
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Entry
111107842 CDS
T09197
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111107842
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111107842
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GFIT
Motif
Pfam:
TIR
LRR_8
TIR_2
LRR_4
LRR_14
LRR_5
LRR_EndoS
LRR_Zer-1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
111107842
NCBI-ProteinID:
XP_022298935
UniProt:
A0A8B8B691
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Position
8:complement(70635750..70638191)
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AA seq
605 aa
AA seq
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MPILTRGIQNSTIEILRLNRIQCTFGVGAELRIEDLRFLKYTNLKEIRLKSNRIEQVENG
ATYFLPQSLEKIYVEDNLFTFGLYIFEIISLQNLKWLNIALQQMSHSPVEVVENILHFCV
NKRRKIISDMEVYPSNKSIKHAQEMYKAMSTYNFTIPVPPNLEKISAMRMGLRYVIPKLK
FSKNTIKELYMQRNTFYQWTGPIIGMNHLHLLDLSNNFCSNVSSDFFSHIINLSKLYISN
NLLGYSIASDIDGRIFANLLHLRIIHLRANRIAHLPFMVFKNLKNLQHLDLSDNLLTTVE
FDILKLKALQYLDLSGNQIQAFGESTRKNISHLKEKTNISLNLMNNPLRCDCKTLDFLQW
MVKERKLGKIRFPRFRDYACTMSYSDRKVLKFINIEIQIEELIKQCSSYTTLVFIIASLI
ILFLVVLSAGLIYRVRWKLRYFYYMIKSRYHGYKAVRGDDQSDLKYNAFVSYADEDRQFV
LKMISKLEGEKNIRLCIHHRDFVPGYDIAENIITAVNKSKKTIIILSPNYIKSSWCMYEL
HIAKMEEIYSRDKENVLFLIFYEAVPADEIPLKIMDVINQKSYIEFPNDEYGDTVFWNRL
GEAMM
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcctatattaacacgcggtattcaaaattcaaccatagagattcttcgacttaataga
attcagtgtacatttggtgtaggtgcagaactcaggatagaagatttgagattcttaaaa
tatacaaaccttaaagaaattcgccttaaaagcaatagaattgaacaagttgaaaatgga
gcgacttattttttgccacaaagtctagaaaaaatttatgtcgaggacaacctttttaca
tttggactgtatatttttgaaattatttccttacaaaatctgaaatggctaaacattgcg
ttacaacaaatgtcacacagcccagtagaagtcgttgaaaatattttacatttctgtgtg
aataaaagaagaaaaatcatatccgacatggaagtatatccatccaataaaagtatcaaa
catgcacaagagatgtataaagcaatgtcgacgtataattttacgatacctgttccacca
aatttagaaaaaatttctgctatgagaatggggctacgctatgttattccaaaacttaaa
ttctccaaaaacacaattaaagagttgtacatgcagaggaatacattttaccagtggaca
ggcccaatcattggtatgaatcatcttcatttactagatttgtcaaataacttttgttct
aatgtttcgagtgatttcttttcacatatcataaatctttctaaattatatatcagcaac
aatttgcttggctatagcatagcatcagatatagatggaagaatctttgcaaatctactc
catttaaggatcatacatttgagagctaatagaatagcgcatttgccatttatggtattt
aaaaacttgaaaaatctacaacacttagatcttagtgacaatttgctaacaacagttgaa
tttgacatattgaagctaaaagctctacagtatcttgatttatcaggaaatcagatacaa
gctttcggtgagtcaacaaggaaaaatatatctcatctcaaagaaaaaaccaacatcagc
ctgaacttaatgaacaaccctttacggtgcgattgcaaaactctcgactttttgcaatgg
atggttaaagaaagaaaattggggaagatcagatttccacgtttccgagactatgcttgc
actatgtcttattcagatagaaaagtattgaagtttattaatatcgagatacaaatcgag
gaactaattaaacaatgcagctcctatactactctggttttcatcattgcatcgttaatc
atacttttcctcgttgttctctcggctggtctgatctaccgggttagatggaaacttcgt
tatttttactacatgataaaaagtcgctatcatggatataaagctgttcgaggggatgac
cagtcagacttaaaatataatgctttcgtttcctatgctgatgaagatagacaattcgtt
ctaaaaatgatctctaagttagaaggggagaaaaatatccgtttgtgtatccatcatcgt
gactttgttcctggatacgacattgcggaaaatattataacggctgtcaacaaaagcaag
aagacaattatcattttgtctccgaactacatcaagtcgagttggtgcatgtatgaacta
catatcgcaaaaatggaagaaatctattcgcgagacaaagaaaacgttttgtttcttata
ttttatgaagcagttcctgctgatgaaattcctttgaaaataatggatgtgattaaccaa
aagtcatacatagagtttcctaatgacgaatatggtgatactgttttctggaatcgactg
ggagaagccatgatgtaa
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