KEGG   Crassostrea virginica (eastern oyster): 111108030
Entry
111108030         CDS       T09197                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    111108030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvn03400]
    111108030
DNA repair and recombination proteins [BR:cvn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     111108030
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 DUF3337 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_EML EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_DCAF12 ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WDR90_beta-prop_4th RAWUL Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_Nup120_160 Nucleoporin_N Beta-prop_Vps41 Beta-prop_VPS8 WDR54 YtzH HTH_VMAP-M9
Other DBs
NCBI-GeneID: 111108030
NCBI-ProteinID: XP_022299226
UniProt: A0A8B8B818
LinkDB
Position
8:2049675..2060724
AA seq 681 aa
MMSSHNRGSAGQGKRKTQISFIIRDEIEKYNRSGVNAIQYDPELQRLYSAGRDSIIRIWD
TQAKEDPYLFSMEHHFDWVNDIVLCREGRALISASSDTTIKVWNAHEGSCLATLRTHKDY
VKCLAYAKEKEMVASAGLDRSIVYYDVASLVALTVNNNTTSISSVRETHSIYSLAMNPSG
TVLVSGSTENALKVYDPRDCVTCLMKLKGHTDNVRALVVNKDGTQCLSGSSDGTIRLWSL
GQQRCIATLRVHDDSVWALQANDTFTTVYSGGRDKRVWATDLRNPEHRTLVCEEKAPILK
LELIQGDSETVSRPGVTDSIWVATTDSSFKNWSLDKIQNRMSGDYDNDTVKPVYTQPLKT
VKGNPRIKQYHVLNDKCHILTRDTEDNVALWSVLNAQLVENLGKVNFEEEIKKRFKMVYV
HHWFAVDLKLGLLTIHLDESDVFSAWVSAKELGFTPQSESVDTKFNLGQKLLEALFEHWP
RGYWFMENQEGLLEKVDSPDFSVPDHTLIIIWLGQPSSHGSSDGESFNFYRFVCRDAGEM
DQMNVPKHLNDWVPPWAAEVIIHKKTPKTIKLTFYLHPDPSTGIKPFKNEALSVPSDLMQ
VKKVIEHVYKFLRQGTENGHHSNQSANHEKEPQEFSSIAAEKVELLCNNQVLNANMDLRT
VKHFFWKQSGDLVLHYRIIKR
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgatgtcttctcacaaccgtggctcagctggacaaggaaaaagaaaaacacagatttct
ttcatcattcgagatgaaatcgaaaagtacaatagatcaggagtaaatgctattcagtat
gatccagagttacaaagactgtattcagctggaagggactccattatacggatatgggac
actcaagcaaaagaggacccatatttgttttctatggaacatcattttgattgggtaaat
gacattgtcttatgtcgagaaggaagagcattaatatccgcatccagtgataccactata
aaagtatggaatgctcacgagggttcatgtctagcaacacttcgaacacacaaggactat
gtcaaatgtctggcatacgcaaaagagaaggagatggtggcgtccgcgggactggaccga
tccattgtctactacgacgtggccagtctggtggctctgactgtcaataacaacactaca
tctatatccagtgtgagggagacccattccatctacagcctggccatgaacccctcaggg
acagttttggtgtctgggtccacagagaatgccctgaaggtgtacgaccccagggactgt
gtgacctgtctcatgaagttgaaaggtcacacggacaatgtcagggccctggtggtcaac
aaagatggcacacagtgtttatccggcagttctgatggaacaattcggctttggtcccta
ggtcagcagagatgtattgcaaccctccgtgtccatgacgacagtgtgtgggcattacag
gccaatgacacgtttacgacagtgtattcaggaggtcgggacaagagggtgtgggccaca
gacctacgcaatccggaacaccggaccctcgtttgtgaggaaaaagctcccatattgaag
ctggagctgattcagggagactcggaaactgtctcccgccctggtgtcacggactcaata
tgggtggccactaccgactcttcttttaaaaactggtctctagacaagatacagaacaga
atgtctggagattacgacaatgacactgtgaaaccagtatacactcaacctctgaaaacc
gtgaaaggaaatcctagaatcaaacagtaccatgtcttgaatgacaaatgtcacattctg
acccgggataccgaggacaatgttgccctgtggagtgttttgaatgctcagttggtagaa
aatctgggaaaagtcaattttgaggaggagatcaagaaaaggttcaagatggtgtatgtg
catcactggtttgctgtagatctgaaactggggttgctgactattcatctcgatgaatct
gatgtcttctctgcctgggtgtcagccaaagagctaggcttcaccccacagtctgagagt
gtggatactaaatttaatttaggtcaaaagctgttagaggcactctttgaacactggccc
agaggatactggttcatggagaatcaagagggactgctggagaaggtggactcccccgac
ttctccgtgccggaccacaccctcatcattatctggctgggacaaccctcctcgcatgga
agcagtgacggggagagttttaatttctatcggtttgtctgccgagatgctggtgagatg
gatcagatgaatgtacctaagcatctcaacgactgggtgccaccctgggcagctgaagtt
atcattcataaaaagacaccaaaaactatcaaactaaccttctatcttcatccagatcca
agtacaggcatcaaaccattcaaaaatgaagccctctcagtacccagcgacttgatgcaa
gtgaagaaggtcatcgagcatgtgtacaagtttctgaggcagggcacggagaatggacat
cattccaaccagagtgccaaccacgaaaaagagccccaggaattcagttctatagctgca
gagaaagtggaacttctgtgcaataatcaggtcctcaatgccaatatggacttaaggaca
gtgaaacatttcttttggaaacagagtggagacttagttttacattaccggataataaag
agatga

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