KEGG   Crassostrea virginica (eastern oyster): 111108150
Entry
111108150         CDS       T09197                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    111108150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvn03400]
    111108150
DNA repair and recombination proteins [BR:cvn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     111108150
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_DCAF12 NBCH_WD40 ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st RAWUL Beta-prop_NUP159_NUP214 Nucleoporin_N Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_NOL10_N WDR54 YtzH
Other DBs
NCBI-GeneID: 111108150
NCBI-ProteinID: XP_022299475
UniProt: A0A8B8B7S6
LinkDB
Position
8:complement(74992103..75001664)
AA seq 681 aa
MMSSHNRGSAGQGKRKTQISFIIRDEIEKYNRSGVNAIQYDPELQRLYSAGRDSIIRIWD
TQAKEDPYLFSMEHHFDWVNDIVLCREGRALISASSDTTIKVWNAHEGSCLATLRTHKDY
VKCLAYAKEKEMVASAGLDRSIVYYDVASLVALTVNNNTTSISSVRETHSIYSLAMNPSG
TVLVSGSTENALKVYDPRDCVTCLMKLKGHTDNVRALVVSKDGTQCLSGSSDGTIRLWSL
GQQRCIATLRVHDDSVWALQANDTFTTVYSGGRDKRVWATDLRNPEHRTLVCEEKAPILK
LELIQGDSETVSRPGVTDSIWVATTDSSFKNWSLDKIQNRMSGDYDNDTVKPVYTQPLKT
VKGNPRIRQYHVLNDKCHILTRDTEDNVALWSVLNAQLVENLGKVNFEEEIKKRFKMVYV
HHWFAVDLKLGLLTIHLDESDVFSAWVSAKELGFTPQSESVDTKFNLGQKLLEALFEHWP
RGYWFMENQEGLLEKVDSPDFSVPDHTLIIIWLGQPSSHGSSDGESFNFYRFVCRDAGEM
DQMNVPKHLNDWVPPWAAEVIIHKKTPKTIKLTFYLHPDPSTGIKPFKNEALSVPSDLMQ
VKKVIEHVYKFLRQGTENGHHSNQSANHEKEPQEFSSIAAEKVELLCNNQVLNANMDLRT
VKHFFWKQSGDLVLHYRIIKR
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgatgtcttctcacaaccgtggctcagctggacaaggaaaaagaaaaacacagatttct
ttcatcatccgagatgaaatcgaaaagtacaatcgatcaggagtaaatgctattcagtat
gatccagagttacaaagactgtattcagctggaagggactccattattcggatatgggac
actcaagcaaaagaggacccatatttgttttctatggaacatcattttgattgggtaaat
gacattgtcttatgtcgagaaggaagagcattaatatccgcatccagtgataccactata
aaagtatggaatgctcacgagggttcatgtctagcaacacttcgaacacacaaggactat
gtcaaatgtctggcatacgcaaaagagaaggagatggtggcgtccgcgggactggaccga
tccattgtctactacgacgtggccagtctggtggctctcactgtcaataacaacactaca
tctatatccagtgtgagagaaacccattccatctatagcctggccatgaacccctcaggg
acagtactggtgtctgggtccacagagaatgccctgaaggtgtatgacccccgggactgt
gtgacctgtctcatgaagttgaaaggtcatacagacaatgtcagggccctggtggtcagc
aaagatggcacacagtgtttatccggcagttctgatggaacaattcgactttggtcccta
ggtcaacagagatgtattgcgaccctccgtgtccatgatgacagtgtgtgggcattacag
gccaatgacacatttacaacagtgtattccggagggcgggacaagagggtgtgggccaca
gacctacgcaatccagaacaccggaccctcgtttgtgaggaaaaagctcccatattgaag
ctggagctgattcagggagactcagaaactgtctcccgcccgggtgtcacggactcaata
tgggtggccactaccgactcttcttttaaaaactggtctctagataagatacagaacaga
atgtctggagattacgacaatgacactgtgaaaccagtgtacactcaacctctgaaaact
gtgaaaggaaatcctagaatcagacagtaccatgtcttgaatgacaaatgtcacattctg
acgcgagataccgaggacaatgttgccctgtggagtgttttaaatgctcagttggtagaa
aacctgggaaaagtcaattttgaggaggagatcaagaaaaggttcaagatggtgtatgtg
catcactggtttgctgtagatctgaaactggggttgctgaccattcatctcgatgaatct
gatgtcttctctgcctgggtgtcagccaaagaactaggcttcaccccccagtctgagagt
gtggacactaaatttaatttaggccaaaagctgttagaggcactctttgaacactggccc
agaggatactggttcatggagaatcaagagggactgctggagaaggtggactcccccgac
ttctccgtgccggaccacaccctcatcatcatctggctgggacaaccctcctcacacgga
agcagtgacggggagagttttaacttctatcggtttgtctgccgagatgctggtgagatg
gatcagatgaatgtacctaagcatctcaacgactgggtgccaccctgggcagccgaagtt
atcattcataaaaagacaccaaaaactatcaaactaaccttctatcttcatccagatcca
agtacaggcatcaaaccattcaaaaatgaagccctctcagtacccagcgacttgatgcaa
gtgaagaaggtcatcgagcatgtgtacaagtttctgaggcagggcacggagaatggacat
cattccaaccagagtgccaatcacgaaaaagagccccaggaattcagttctatagctgca
gagaaagtggaacttctgtgcaataatcaggtcctcaatgccaatatggacttaaggact
gtgaaacatttcttttggaaacagagtggagacttagttttacattaccggataataaag
agatga

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