Crassostrea virginica (eastern oyster): 111108351
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Entry
111108351 CDS
T09197
Name
(RefSeq) probable tRNA pseudouridine synthase 2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111108351
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
111108351
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
111108351
NCBI-ProteinID:
XP_022299870
UniProt:
A0A8B8B8X8
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Position
8:47637745..47640981
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AA seq
430 aa
AA seq
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MAKFTRPGRFRAMGPYWRSQLQGIFCVYKPPDYSYAELCKTFRKILLNDLNQLPCYPGEK
FQKNAFNMRHDLQNHKQKHLKADPQSENWKLHLSVADAENESKTTHEDLDSNCSVDNQSV
REGKESTGSFLTWNPMDLKLHSDSSEVPAKSDYSVEKHSLFSSKLKDLIIPPLSQKNALQ
HRFVCGDMYEQQDVKVIPLYDGLNEESSGVVPMCVGLWNSTSYALRDGLEKNLFIRVYHL
SGTLGWTTTDNTAYSKKLKRHSYEHVGRADIDKMCGLAQNMHQWRMLDYAGVVPGSQEAY
ELLKKGLVKPLNSKTPPLIYGVRCIKFEPPEFTLEVHCVNETYTFLRDFIYKVGVSVRSS
AYCTKVRRIRYGPIGLEHALVAEEWNLRKVCASIQQCYKLLLPPNMPKREEEEEEEEKDQ
ILSSSAFDKL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtttacgaggccaggacgatttcgtgccatggggccatattggagatcgcag
ctacaaggaattttttgtgtttacaaacccccggattactcctatgcagaactctgtaaa
acatttcgaaaaattttactcaatgatttgaaccagttaccgtgttaccctggggaaaag
ttccaaaaaaatgcctttaatatgcgacatgatcttcaaaatcataaacagaagcatctt
aaagctgacccacagtcagagaactggaagcttcatttgtcagttgctgatgcagaaaat
gaaagtaaaactacacatgaggatttagattccaattgttctgttgataaccaaagtgtt
cgagaaggaaaggaaagtaccggttcttttttaacttggaatcccatggacctaaagctt
cactcagattcaagtgaagtaccagctaaaagtgattattcagttgaaaagcactctctg
ttttccagcaaacttaaggatttaattattccccctctttcacagaagaatgccctgcaa
cacaggtttgtttgcggcgacatgtacgagcaacaggacgtaaaagtcatccctctgtac
gacggtctgaacgaggaatcatcaggagtggtgccgatgtgtgtaggactgtggaatagc
acttcttatgccttgagagacggcctggagaaaaatctattcattcgagtataccatctc
tccggcactttgggatggaccacgacggacaatactgcatattcgaaaaaattgaaacgt
cattcctacgagcatgtcggaagagcagatatcgacaagatgtgcggcttggcgcagaac
atgcatcagtggaggatgctggactatgcgggagtggtgccgggctcccaggaagcctat
gaactactgaaaaaaggtcttgtgaagccgttgaattccaagaccccacctttgatctac
ggggtgaggtgcatcaagttcgaacctcccgagtttactctggaagtgcactgtgtcaat
gaaacttacacctttctaagggattttatttataaagttggagtgtctgtgcgatcttct
gcatactgtacaaaggttcgacgtatccgttacggaccaattgggttggaacatgcactg
gtggcagaagaatggaacttacggaaagtctgtgctagcattcaacagtgctacaaactg
cttcttcccccaaatatgcccaaaagagaagaggaggaagaggaggaggagaaagatcaa
attttatcctcctcagcttttgataaattataa
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