Crassostrea virginica (eastern oyster): 111108438
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Entry
111108438 CDS
T09197
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111108438
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
111108438
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
111108438
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
111108438
NCBI-ProteinID:
XP_022300033
UniProt:
A0A8B8BA31
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Position
8:complement(60151451..60159342)
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AA seq
526 aa
AA seq
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MKMKILTWNINGIRASKVKLAALFDTLDADVICLQETKVTRDMLDEPTAIVEGYNSYFSF
SRKRSGYSGVATFCKSCATPIQAEEGLYRDLNPKLEGKLGHYGDVSEFSSDELEALDAEG
RAVLTKHKIRKRDGKEEELAIINVYCPRADPEREDRLLYKLRFFALVQTRAEALLRSGCS
VIVLGDMNVKHKSIDRSEEDETGTVTTPSRVWVNQFVWDQDRDTSIADVEDRGDFAGTTR
TLTGGKFVDSFRYFYPDKKDAFTNWCTLTGARETNYGRRLDYIFTSIELSKSDLKDCVIM
ADVEGSDHCPVKAEYFSEFIPAEKCPPLCTKFMPEFCGKQVKLSSFFIKKEKTIESSDTT
DSQKLAENISQSVTNKADSVSLKRPCSVEKNGNPAKKKKADSADSKQGSIKGFFQKSCSK
TEVVEIKIKEPSSDSKEENSVTDTEVKAVNLVTVKSNSASAWKNLLQGPPPPPLCKGHQE
PCVLRTVKKPGPTKGKQFFVCARGEGHSSNPEARCDFFKWVDYKKK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagatactaacatggaacatcaatggaattcgcgccagtaaagtgaaactt
gcagcattgtttgacacattagatgcagatgtcatttgtcttcaagaaaccaaagttaca
cgagacatgcttgatgaaccgacagccattgtagaaggctacaactcctacttttctttt
tcgaggaagcggagtggatattctggcgtagcaacattctgtaaatcctgtgcaacacct
attcaagcggaggaaggtctgtatagagacttgaaccccaaactggaaggtaaactgggt
cactatggtgacgtcagcgagttttccagtgacgagttagaggcactggatgctgagggc
cgagcagtcctcaccaaacataaaatcaggaaacgagatgggaaggaagaggagctggcc
atcatcaatgtatactgtccgcgggcagaccccgagagagaggacaggctcctctacaag
ctgcgcttctttgccctcgtacagaccagggcggaagctctcctgaggagtggatgcagt
gttatagttcttggagacatgaatgtaaaacacaagagtattgaccgcagcgaggaggat
gaaacggggacggtgacgacgcccagtcgggtgtgggtgaaccagtttgtgtgggaccag
gacagggacaccagtattgctgatgtggaggatcggggggacttcgccgggacaaccagg
actctgaccgggggaaaatttgtggattcctttcgatatttttatccagataaaaaggac
gctttcaccaactggtgcacgctgacaggggctcgagaaaccaattatggccgtcgtctt
gattatatttttaccagcattgagctgtcgaaaagcgatctcaaggactgtgtgataatg
gcggatgttgaaggttcagaccattgtccagtgaaggctgagtatttctctgagtttata
ccagctgagaaatgtccacctctctgtacaaaattcatgccagagttttgtggaaagcaa
gttaaactttcttcattcttcataaagaaagagaagaccattgaaagcagtgatacaaca
gacagtcagaagttggcagagaacatatcacagagtgtaacgaacaaggctgatagcgtg
tcattaaaacgaccatgtagtgtagaaaagaatggtaatcccgcaaagaaaaagaaagct
gattcagctgattcaaaacagggtagcataaaaggatttttccaaaagtcttgttcaaaa
acagaggttgttgaaatcaaaataaaagaaccttcaagtgactccaaggaagagaattca
gtgacagatacagaggtcaaagctgtgaatttggtcacggtgaaaagtaactcggcaagt
gcttggaagaacttgcttcaaggtccccctccccctcccctgtgtaagggtcatcaggag
ccctgtgtgttgaggactgtgaagaaaccaggcccaactaagggtaaacagttctttgtg
tgtgcccggggggagggtcacagttctaaccccgaggccaggtgtgacttcttcaagtgg
gtagactacaagaaaaagtaa
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