Crassostrea virginica (eastern oyster): 111108455
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Entry
111108455 CDS
T09197
Name
(RefSeq) RNA polymerase II-associated protein 3-like isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111108455
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111108455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_8
TPR_2
TPR_11
TPR_19
TPR_17
TPR_BSK1_C
Fis1_TPR_C
TPR_6
TPR_12
TPR_CcmH_CycH
TPR_14
TPR_Slam
TPR_9
Motif
Other DBs
NCBI-GeneID:
111108455
NCBI-ProteinID:
XP_022300065
UniProt:
A0A8B8B9G5
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All DBs
Position
8:15115878..15121968
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AA seq
517 aa
AA seq
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MAKMSSSEAKMLMLQHQMRENNMDLDAFVKDMNKWEDDIKEREQKIISKKSVNDQQDLPP
VRNSLKIKKKKKVKPKKDDDSQGSKPRKRISGYDYRSWDKLDIDKMCDDVDKREKSESSD
YETDEEWEIERKKQQASLEKDAGNEYFKRGDYINAIESYTKGMGLDPTNPILPANRAMAL
LKEKKYAAAEMDCMTALTFDPLYVKAYLRLGSAQFFMKKLQKAKETFEKVLQLEPQNKQA
KLEIEKIEKEMKKEQMVTHDSAAPDLGIVKPITIPPNKRSKKPLKRLEIEEVGVEETDIR
QAARSRVEESHSKQRKDTESKDNQMFTKFTSPGMINAGSNQNIVKEPKPVITNGSAVKSQ
TDTRLDLSSVHSESSPQASVSPRSEAKSLSPRSFSVPGSSFQFQADYKVLKNDTAAFYDY
LKKIEPALYPKLFGECLDAEILLKMLTVFQNCYKPAGEDYFPHMRKLTEVKRFGMTVMFF
SRKEKQVLQDLFENLKQNGAVPESDLKSLATKYGINY
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaatgagttcttcggaagcaaagatgctgatgttgcagcatcaaatgcgggag
aacaacatggaccttgatgcttttgtaaaagacatgaataaatgggaagatgatatcaag
gagagggagcagaaaataattagtaaaaagtctgttaatgatcagcaggatttaccccca
gtgagaaacagtttgaaaataaagaagaaaaagaaagtgaaacccaagaaggatgatgat
agccaagggagcaaaccccgcaaaagaatcagtggttatgactaccggtcctgggacaaa
ctggatattgacaagatgtgtgatgatgttgacaaacgggagaagtcagaatcctctgat
tatgaaacagacgaggagtgggagatagagagaaagaaacagcaggcctctttggagaaa
gatgctggaaatgaatacttcaagcgaggggattacatcaatgccatagagtcatacaca
aagggaatgggattagatcccaccaatcccatcctcccagctaacagagcaatggctctc
cttaaagaaaagaaatatgctgctgctgagatggattgcatgacggccttgacctttgac
cctctctatgttaaagcttacctgcgacttggatcagcacagttcttcatgaagaaactt
cagaaagcaaaagagacatttgagaaagttctacaactggaacctcagaacaagcaagcc
aagttggagatagaaaaaattgaaaaggaaatgaaaaaggagcagatggtgacccatgat
agtgctgcgccagatttgggcatcgtcaaaccaatcacaatccctcccaataagagatca
aagaagccactaaagaggttagagattgaagaagtgggggtggaggaaacagatatacgt
caggcagctcgatcacgtgtagaggaaagccacagcaaacagagaaaggacactgaatcc
aaagacaatcaaatgttcactaaattcacaagccccggcatgatcaacgcaggaagcaac
caaaacatcgttaaagaacctaaacctgtgataacgaatggaagtgcagtcaaatctcag
acagataccagactggatttatcaagtgttcatagtgaaagttctcctcaagcttctgta
agtcccagatcagaggccaaatccctgtcaccaagaagcttttctgtccctggatcttca
tttcaatttcaggcggattacaaagtgctcaagaatgacacagctgctttctatgactat
cttaagaagatagagcctgccttatatcctaagctgtttggagagtgtcttgatgcagaa
atattgctgaaaatgctaacagtgtttcaaaattgttacaaaccagctggtgaggactac
tttccacacatgcggaagctgacggaagtgaagaggtttggtatgactgtgatgttcttc
tccaggaaggaaaaacaagtgctacaagatttgtttgaaaacctaaaacaaaatggagca
gtaccggaaagtgatctgaagtctctggcaacaaaatatggaatcaattactga
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