Crassostrea virginica (eastern oyster): 111108467
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Entry
111108467 CDS
T09197
Name
(RefSeq) collagen alpha-2(VIII) chain-like
KO
K23284
C1q-related factor
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111108467
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Phagocytosis
Opsonins
111108467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
BclA_C
YjcZ
FleQ
Capsid_NCLDV
Mim2
Motif
Other DBs
NCBI-GeneID:
111108467
NCBI-ProteinID:
XP_022300082
UniProt:
A0A8B8B9I3
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All DBs
Position
8:complement(47204771..47205945)
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AA seq
263 aa
AA seq
DB search
MAAWHCCILLVCLLSPLKAEADDREWKEEMEKQLKQVLSFVEEQAQLIERQNLEITTLKN
RVNVLETINAMREETEMIPTSSIHETETNISNIVNTLDEQSLTQEGRQKRLPVRQIKEGT
AVAFYAYISKDFTHVGNGHVFVFDTVVTNSGNAYNKYSGIFTVPSSGLYAFSYSIAVAGY
HMSGDYDSNFGEISVQLVRNASPCGSIAADTEARYEDEMATGFAILSLDAGDIVRVVSQS
SAQGTFRSDSVEHWAFSGFKISS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctggcattgctgtattttgttggtttgtttgttatctcccctgaaagcagaa
gcagacgacagagaatggaaggaggaaatggagaaacagttgaaacaagtgctctcgttc
gtcgaggaacaggctcagctgatcgaacgtcaaaacttggagatcacgaccttgaagaat
cgagtgaacgtccttgagacaataaatgcaatgagagaagaaacagagatgataccgact
tcctcgattcatgagacagaaaccaacatcagcaatattgtgaatacattggacgagcag
agcttgacccaggagggtcgacaaaaacgtttgcccgtcagacaaataaaggagggaacg
gccgtggcattctatgcttacatttccaaggacttcacgcatgtcggaaacggtcacgtg
tttgtattcgatacagtggtgaccaatagtggaaacgcttacaacaagtacagcggaatc
ttcacagtgccatctagcggtctatacgcgttttcgtattccattgcagttgccggatac
catatgtcgggtgattacgattcaaacttcggagaaatctcagtgcagttggtaaggaac
gcgtcgccctgcggctccattgcagcggacacggaagctagatacgaagacgaaatggcc
acaggatttgctattctatctctggatgctggagacattgtacgggttgtttcgcaaagt
tcagctcaaggaacattcagaagtgactctgttgaacattgggcattttcaggatttaaa
ataagctcctaa
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