KEGG   Crassostrea virginica (eastern oyster): 111108600
Entry
111108600         CDS       T09197                                 
Name
(RefSeq) stabilin-2-like
  KO
K19013  stabilin-2
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    111108600
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cvn00536]
    111108600
Glycosaminoglycan binding proteins [BR:cvn00536]
 Hyaluronan
  Cell surface receptors
   111108600
SSDB
Motif
Pfam: Fasciclin EGF_3 cEGF EGF_STAB1-2 EGF_Teneurin EGF FXa_inhibition
Other DBs
NCBI-GeneID: 111108600
NCBI-ProteinID: XP_022300291
UniProt: A0A8B8BBC6
LinkDB
Position
8:complement(49243635..49267348)
AA seq 1617 aa
MLFNMNVLNGISLVIIIQGLFYALPVDSIDFCKMNKINIQRFETECVLCSKNSHTECPRN
ATKVTSDNGLQTCQLELNMGNETNPRIIKMAGCSHTCLERIPEPYCCEGYYGPNCIECPK
FNWGICNERGTCNDTITGSGECECEANFTGFACEKCSQSDVYGENCNETCDCVNGECDSG
FRGSGNCDCFSGWGGDRCAQEISGCDYKNCSANSRCVQVEGANYTYCSCNQGYERDINAT
EHTCNPVDLCANGKHKCNENATCTFSGPSMYNCSCLEGFRGDGFVCDPIDPCRDFYGGCN
FTTSICTYKSPGKRDCVCKAGYELSSNQTCELIDLCSRNSSLCDKNADCVMNGPLEHICI
CREGYASAGDVCINNLFGMLEDIHNNDPDLASKMTWSIKLVENIYHEEFRYHGPFTVFLP
TDFGFRTIYRKMDIDEFLTDRDTASQILRQHIILGKWTMENLTRMNTFYTLQGKAAEIQI
KSRGEITYRFRLSGSRSKSSVIKHDLTASNGIIHVVQKLLTNDADVEGDTSETIFTLLKD
SKRYSIMESLIEKAGLQSEFERDNITVFAASSSAWNELPGGVMDYLQSDEGRATLKLILK
HQIVNETIEVADLINRATIQTLSRAVVPILITTQGQIRLDIGANIIQTDIPAKNGLLFHI
DKVLLPMERDEILPRICGYLNTTELEQGYCGPCFSPLGCEKGVPTGQIDQCTLKKAMVNR
HPDTGKIKLWFTTSNGCRDTCNTTKTTPVCCPGYFGARCSMCPGEYNNPCSGKGKCEDGL
DGNGTCDCDEGFSGTACEQCSDSQKFGPGCNQTCTCVHGTCNNGPEGDGKCKSCYSKKVS
IFRRPVKYGGENCDLFSVPCNGGLYTKRCHIDATCIRQGLTFSCVCDPGYEGDGDTKCTP
INPCEKPKRGGCHREAICKMDGPGGNTCTCNEGWTGDGLYCYPGSECGDHLQCHEDATCR
SDPAHDSSLCWCNDGFHGNGTFCVPNDMCKFDNGGCHVKANCTPVAPGLNNCTCQRGYEG
DGVSCIPTINELIINHPDLTKLAAFLKHLGDDSILQYDLDRYTFFAPTDTAMDFLIRRRD
EDFFSDDDNVLGFINYHTVLGENRVEDLRASVNVIERFNTLSDGYFLHFKVDNGTVLLST
NNKFVITASIVKSNLVAANGYVHIIDRALEPELETNGLPTLEDFLETSTDTTEFGKWLKT
KGLVDEIMNMNQYTLFLPLDEKFEDEELSTPYITSDYLRYYVLPVIRLAESFDDQERVDT
VLGPRNPISLQVIGKKVFLNGERMIVQSNFLTDGGVVHKIAGYIHPNLHRCDVSNKTVAH
SDCVPCEIGHFICPTGYTLDSGTATKDCIYSSGVTSYRGCRSLCSREEKVAGCCAGFYGE
HCQACAGGSEFPCNDNGRCNDGLTGDGSCTCFPGYTGTSCQLCINSTDNSTSECARSCAY
HNGGCHENGTCHEYAGSVTCACPQGYIGDGHRCVRPCDENNGGCHIMAVCKERNDSSTEV
DCSCQGDYQGNGFLCTPIPSKLSSSETAGAVTGGLVGFLIVIVAIVILIITIHRRRHSET
FMKRERFGSNESFEKLHPTQSGEENYIALQPSPPSEVKFDNPMYCVKEQQLGDFQDD
NT seq 4854 nt   +upstreamnt  +downstreamnt
atgttattcaatatgaatgttttaaacggtatttcgttagtgattattattcaaggattg
ttttatgcattaccggttgactcaatagatttctgtaaaatgaacaaaatcaatattcaa
agatttgaaacagaatgtgttttatgttccaaaaattcgcataccgaatgtccccgaaat
gcaacaaaagtgacgtcagataatggtctccaaacctgtcagttggaactgaacatgggg
aatgagacgaatcccagaattatcaaaatggcgggatgttcgcacacgtgcctggagcga
atcccagaaccgtattgctgtgaaggatattacggccctaactgcattgagtgtcccaaa
ttcaactggggaatttgtaatgaaaggggaacttgcaatgacacgataactggaagcgga
gagtgcgaatgtgaagcaaatttcacaggatttgcttgtgagaaatgctcacagagtgac
gtatatggagaaaattgtaatgaaacctgtgattgtgtaaatggggaatgtgacagcgga
tttagaggatccgggaattgtgattgcttctccggatggggaggagaccggtgtgctcaa
gagatctctggttgtgactataagaactgcagcgccaactcgcgctgtgtacaggtagag
ggcgctaactacacttactgttcctgtaaccaaggctacgaacgggacatcaacgccacg
gagcacacctgcaaccctgtggatttgtgtgcaaatggcaaacataagtgtaacgaaaac
gccacctgtacctttagtgggccttcgatgtataactgctcttgtctagaggggttccga
ggagacgggtttgtgtgtgatccaatcgatccctgccgagacttctacgggggatgtaac
ttcaccacgtctatttgcacctataaatcgccaggaaagagggactgtgtatgcaaagct
ggttatgagctgtccagcaatcagacttgcgagctcatagacttatgttccagaaatagc
agtctttgtgataaaaacgccgactgtgttatgaatggaccccttgaacacatatgtata
tgccgcgagggatatgccagtgctggagatgtctgtatcaacaatctttttggtatgttg
gaggatatccataacaacgaccctgaccttgcttccaagatgacctggtccattaaactg
gtggagaacatctaccacgaggagttccggtaccacggtcccttcaccgttttcctcccc
accgacttcggtttccggaccatctacaggaaaatggacatagatgaattcctgaccgac
cgagatacggcaagccagattttacgacaacatatcattcttggcaaatggaccatggag
aacttgactcgtatgaacacattttacacactgcaagggaaagcggctgaaatccagatc
aaatcacgtggagagattacctatcggttcagactaagtggatccaggagcaagtcctcg
gtgataaaacacgacctcaccgcttccaatgggatcatccacgtggtgcagaaactgctg
acgaacgacgcggacgtggaaggagacacctcggaaacaatatttaccctgctaaaagac
tccaagcgttatagcatcatggaatccctaatcgagaaagccggcttgcagtctgaattt
gagcgggacaacatcacagtgttcgcggcgagtagcagcgcttggaatgagctgcctggc
ggtgtgatggattatctacagagtgacgaggggcgtgcgacattaaagttgatacttaaa
catcagattgtcaatgaaactatagaagtggcggatctcatcaaccgcgccacgattcag
accctcagtagagcagtggtacctatcctgattaccacacagggccagattcgattagac
ataggagccaacattatacagacagacattccagcaaagaatggcttgttatttcatatc
gacaaggtccttctcccgatggaacgggacgagatcttgccgagaatctgtggatatcta
aataccaccgaactggaacagggatattgtggaccatgcttttctccccttggatgtgag
aagggagtgcctacaggacagatagatcaatgtacgttgaaaaaagccatggtcaaccga
cacccggatacaggaaagataaagctctggttcacgacgagcaatggatgccgggatacc
tgtaacaccacaaaaacgactccggtatgttgcccgggatatttcggagccaggtgttca
atgtgtccaggtgaatacaataatccgtgctctgggaaaggaaagtgtgaggatggacta
gacggcaatggaacttgcgactgtgatgaaggtttctcgggaaccgcttgtgaacagtgt
tcagattcacagaaattcggaccaggatgcaaccagacttgcacatgcgtacatgggaca
tgcaataatggacccgagggtgacggtaaatgtaagtcgtgttatagtaaaaaggtttca
atttttcgaagaccagtgaaatatggtggagaaaattgtgatctcttttctgtgccctgc
aatggcggtctctataccaagagatgtcacatcgatgcgacctgcatccgacaaggactg
acgttcagctgtgtttgtgatccgggctatgaaggagatggagatactaaatgcacaccc
atcaacccatgcgaaaagccgaagaggggtggatgccatagagaggccatctgtaaaatg
gacggacctggcggaaacacgtgtacttgcaacgaaggctggacgggggacggtctatac
tgctaccccgggtcagagtgtggggaccatctgcagtgtcacgaggacgccacgtgtagg
agcgaccccgcccacgattcgtcgctttgttggtgtaatgacggttttcatggcaatgga
acattctgcgttccaaatgatatgtgtaaatttgacaacgggggatgtcatgtcaaggcg
aattgcacaccagtggcccctggtctaaataactgcacgtgccagagagggtacgaggga
gacggggtgtcctgtatacccaccatcaacgagctcatcatcaaccacccagacctgacc
aaactcgccgccttcctcaagcacctgggagatgacagcatcctgcagtatgaccttgac
cggtacaccttcttcgcccccaccgacaccgccatggacttcctgatcagacgaagggac
gaggacttcttctcagacgatgataatgttctaggttttatcaattatcatacagtcctg
ggagagaacagagtcgaagacttgcgcgcttctgtgaatgtcatcgaacggtttaataca
ttgtctgatggatattttcttcattttaaagtagacaatgggacggtccttttatctacc
aacaacaaatttgtgataactgccagcatcgtgaagagcaaccttgttgctgctaatgga
tacgtccacattattgacagggctcttgaacccgagctggaaacaaacggacttcctacc
ctagaggactttttggaaaccagcactgatactaccgaatttggaaaatggttaaagacc
aaaggactcgtggatgaaatcatgaacatgaatcaatatacattgtttctcccattggat
gaaaagtttgaagacgaggaactatcaaccccttacattactagcgactacctgcgttac
tacgtcttaccagtcattcgtctggccgagtcttttgacgaccaggaaagagtggacact
gttctaggaccaaggaacccaatcagcttacaggtcataggcaaaaaggttttcctgaac
ggcgagcgcatgattgtccagagtaactttctaacggatgggggagtggtccataagatt
gctgggtatattcacccgaatctccatagatgtgacgtcagtaacaaaacagtggcccat
agcgattgtgtgccttgcgaaattggacactttatctgtccgacaggatatacgctcgac
tccggaactgctaccaaggactgtatatattccagcggggttacttcatataggggctgc
agatctctctgttctagagaggaaaaggttgctggttgttgtgctggtttctatggtgaa
cattgtcaagcatgcgcgggtggctccgagtttccgtgtaacgacaatggacgttgtaat
gatggcctgactggcgacggatcgtgcacgtgcttcccaggatacaccggaacttcctgt
cagctgtgcattaacagtacagacaattctacttcagaatgcgccagatcttgtgcgtat
cacaatggtggttgtcatgagaatggaacctgtcatgagtatgccggaagtgtgacatgc
gcatgcccacagggttatattggtgacggacatcgatgtgtgagaccctgcgacgaaaat
aacggaggttgtcacatcatggctgtgtgcaaagaaaggaatgacagttctactgaggtg
gattgttcctgtcaaggggactatcaaggcaatggatttctttgtactccaataccctca
aaactttcttcaagtgaaacggctggtgccgtgacaggtggactcgttggttttctcatc
gtcatcgtcgctatcgtcatacttatcatcacaatacacaggcgacgacactcggaaact
tttatgaagagagagaggtttggcagtaatgagtcgtttgaaaagctccatccaactcaa
tccggagaggaaaattacatcgcattgcaaccgtctcccccatcggaagtcaagttcgac
aaccctatgtattgcgtcaaagaacaacaacttggcgattttcaggacgattaa

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